RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 EPSTI1Q96J88 318 aa30.69■■■□□ 2.5
SCARF1-207ENST00000573867 BLOC1S4Q9NUP1 217 aa30.69■■■□□ 2.5
SCARF1-207ENST00000573867 USP20Q9Y2K6 914 aa30.69■■■□□ 2.5
SCARF1-207ENST00000573867 SLC26A4O43511 780 aa30.68■■■□□ 2.5
SCARF1-207ENST00000573867 SSBP05455 408 aaKnown RBP eCLIP30.68■■■□□ 2.5
SCARF1-207ENST00000573867 PLCG1P19174 1290 aa30.68■■■□□ 2.5
SCARF1-207ENST00000573867 NASPP49321 788 aaPredicted RBP30.68■■■□□ 2.5
SCARF1-207ENST00000573867 SLC39A14Q15043 492 aa30.68■■■□□ 2.5
SCARF1-207ENST00000573867 SPOUT1Q5T280 376 aaKnown RBP30.68■■■□□ 2.5
SCARF1-207ENST00000573867 NOTUMQ6P988 496 aa30.68■■■□□ 2.5
SCARF1-207ENST00000573867 ZBTB8OSQ8IWT0 167 aa30.68■■■□□ 2.5
SCARF1-207ENST00000573867 LRRC43Q8N309 656 aa30.68■■■□□ 2.5
SCARF1-207ENST00000573867 KCTD17Q8N5Z5 321 aa30.68■■■□□ 2.5
SCARF1-207ENST00000573867 COLGALT1Q8NBJ5 622 aa30.68■■■□□ 2.5
SCARF1-207ENST00000573867 MORC2Q9Y6X9 1032 aaPredicted RBP30.68■■■□□ 2.5
SCARF1-207ENST00000573867 MYH15Q9Y2K3 1946 aa30.68■■■□□ 2.5
SCARF1-207ENST00000573867 ZSCAN22P10073 491 aaPredicted RBP30.67■■■□□ 2.5
SCARF1-207ENST00000573867 GUCY2CP25092 1073 aa30.67■■■□□ 2.5
SCARF1-207ENST00000573867 PBX3P40426 434 aa30.67■■■□□ 2.5
SCARF1-207ENST00000573867 AFF1P51825 1210 aaKnown RBP30.67■■■□□ 2.5
SCARF1-207ENST00000573867 RAD51AP2Q09MP3 1159 aa30.67■■■□□ 2.5
SCARF1-207ENST00000573867 FAM187BQ17R55 369 aa30.67■■■□□ 2.5
SCARF1-207ENST00000573867 DEPTORQ8TB45 409 aa30.67■■■□□ 2.5
SCARF1-207ENST00000573867 SPPL3Q8TCT6 385 aa30.67■■■□□ 2.5
SCARF1-207ENST00000573867 CCDC51Q96ER9 411 aa30.67■■■□□ 2.5
SCARF1-207ENST00000573867 C2orf40Q9H1Z8 148 aa30.67■■■□□ 2.5
SCARF1-207ENST00000573867 RNF39Q9H2S5 420 aa30.67■■■□□ 2.5
SCARF1-207ENST00000573867 PRMT7Q9NVM4 692 aaPredicted RBP30.67■■■□□ 2.5
SCARF1-207ENST00000573867 NPHP3-ACAD11A0A0J9YXS1 232 aa30.66■■■□□ 2.5
SCARF1-207ENST00000573867 OFD1O75665 1012 aa30.66■■■□□ 2.5
SCARF1-207ENST00000573867 NCLP19338 710 aaKnown RBP30.66■■■□□ 2.5
SCARF1-207ENST00000573867 PPP2R5AQ15172 486 aa30.66■■■□□ 2.5
SCARF1-207ENST00000573867 ARSHQ5FYA8 562 aa30.66■■■□□ 2.5
SCARF1-207ENST00000573867 CALML4Q96GE6 196 aa30.66■■■□□ 2.5
SCARF1-207ENST00000573867 IFT74Q96LB3 600 aa30.66■■■□□ 2.5
SCARF1-207ENST00000573867 CCSER1Q9C0I3 900 aa30.66■■■□□ 2.5
SCARF1-207ENST00000573867 TFIP11Q9UBB9 837 aaKnown RBP30.66■■■□□ 2.5
SCARF1-207ENST00000573867 HES2Q9Y543 173 aa30.66■■■□□ 2.5
SCARF1-207ENST00000573867 IPPQ9Y573 584 aa30.66■■■□□ 2.5
SCARF1-207ENST00000573867 CNTNAP2Q9UHC6 1331 aa30.66■■■□□ 2.5
SCARF1-207ENST00000573867 A0A1B0GUA9 196 aa30.65■■■□□ 2.5
SCARF1-207ENST00000573867 SFI1A8K8P3 1242 aa30.65■■■□□ 2.5
SCARF1-207ENST00000573867 CSPG5O95196 566 aa30.65■■■□□ 2.5
SCARF1-207ENST00000573867 F13A1P00488 732 aa30.65■■■□□ 2.5
SCARF1-207ENST00000573867 PRKCBP05771 671 aa30.65■■■□□ 2.5
SCARF1-207ENST00000573867 NPTX2P47972 431 aa30.65■■■□□ 2.5
SCARF1-207ENST00000573867 PEX3P56589 373 aa30.65■■■□□ 2.5
SCARF1-207ENST00000573867 PTPROQ16827 1216 aa30.65■■■□□ 2.5
SCARF1-207ENST00000573867 NAALADL2Q58DX5 795 aa30.65■■■□□ 2.5
SCARF1-207ENST00000573867 SYMPKQ92797 1274 aaKnown RBP30.65■■■□□ 2.5
SCARF1-207ENST00000573867 LMAN2LQ9H0V9 348 aa30.65■■■□□ 2.5
SCARF1-207ENST00000573867 INPP5FQ9Y2H2 1132 aa30.65■■■□□ 2.5
SCARF1-207ENST00000573867 PLXNA4Q9HCM2 1894 aa30.65■■■□□ 2.5
SCARF1-207ENST00000573867 B4GALT3O60512 393 aa30.64■■■□□ 2.5
SCARF1-207ENST00000573867 LAG3P18627 525 aa30.64■■■□□ 2.5
SCARF1-207ENST00000573867 GLB1LQ6UWU2 654 aa30.64■■■□□ 2.5
SCARF1-207ENST00000573867 LINC00301Q8NCQ3 95 aa30.64■■■□□ 2.5
SCARF1-207ENST00000573867 PGBD4Q96DM1 585 aa30.64■■■□□ 2.5
SCARF1-207ENST00000573867 PRIMPOLQ96LW4 560 aa30.64■■■□□ 2.5
SCARF1-207ENST00000573867 NXF3Q9H4D5 531 aaKnown RBP30.64■■■□□ 2.5
SCARF1-207ENST00000573867 PCDHB12Q9Y5F1 795 aa30.64■■■□□ 2.5
SCARF1-207ENST00000573867 NPTXRO95502 500 aa30.63■■■□□ 2.49
SCARF1-207ENST00000573867 LIG1P18858 919 aa30.63■■■□□ 2.49
SCARF1-207ENST00000573867 CACNB1Q02641 598 aaPredicted RBP30.63■■■□□ 2.49
SCARF1-207ENST00000573867 NCBP1Q09161 790 aaKnown RBP30.63■■■□□ 2.49
SCARF1-207ENST00000573867 MCM6Q14566 821 aa30.63■■■□□ 2.49
SCARF1-207ENST00000573867 SKIV2LQ15477 1246 aaKnown RBP30.63■■■□□ 2.49
SCARF1-207ENST00000573867 MAPK6Q16659 721 aa30.63■■■□□ 2.49
SCARF1-207ENST00000573867 FOXD4L6Q3SYB3 417 aaPredicted RBP30.63■■■□□ 2.49
SCARF1-207ENST00000573867 NOMO2Q5JPE7 1267 aa30.63■■■□□ 2.49
SCARF1-207ENST00000573867 KCNT2Q6UVM3 1135 aa30.63■■■□□ 2.49
SCARF1-207ENST00000573867 FOXD4L3Q6VB84 417 aaPredicted RBP30.63■■■□□ 2.49
SCARF1-207ENST00000573867 DRC1Q96MC2 740 aa30.63■■■□□ 2.49
SCARF1-207ENST00000573867 PDZD7Q9H5P4 517 aa30.63■■■□□ 2.49
SCARF1-207ENST00000573867 RSAD1Q9HA92 442 aa30.63■■■□□ 2.49
SCARF1-207ENST00000573867 TBC1D13Q9NVG8 400 aa30.63■■■□□ 2.49
SCARF1-207ENST00000573867 ACKR2O00590 384 aa30.62■■■□□ 2.49
SCARF1-207ENST00000573867 FGF18O76093 207 aa30.62■■■□□ 2.49
SCARF1-207ENST00000573867 IRS1P35568 1242 aa30.62■■■□□ 2.49
SCARF1-207ENST00000573867 TCEAL5Q5H9L2 206 aa30.62■■■□□ 2.49
SCARF1-207ENST00000573867 SLC27A1Q6PCB7 646 aa30.62■■■□□ 2.49
SCARF1-207ENST00000573867 TAS1R3Q7RTX0 852 aa30.62■■■□□ 2.49
SCARF1-207ENST00000573867 POF1BQ8WVV4 589 aa30.62■■■□□ 2.49
SCARF1-207ENST00000573867 RAD54LQ92698 747 aa30.62■■■□□ 2.49
SCARF1-207ENST00000573867 TIPINQ9BVW5 301 aa30.62■■■□□ 2.49
SCARF1-207ENST00000573867 MRPL9Q9BYD2 267 aaKnown RBP30.62■■■□□ 2.49
SCARF1-207ENST00000573867 AAASQ9NRG9 546 aa30.62■■■□□ 2.49
SCARF1-207ENST00000573867 VCANP13611 3396 aa30.62■■■□□ 2.49
SCARF1-207ENST00000573867 CCDC169A6NNP5 214 aa30.61■■■□□ 2.49
SCARF1-207ENST00000573867 PRPF4BQ13523 1007 aaKnown RBP30.61■■■□□ 2.49
SCARF1-207ENST00000573867 DHX8Q14562 1220 aaKnown RBP30.61■■■□□ 2.49
SCARF1-207ENST00000573867 TIGD5Q53EQ6 642 aa30.61■■■□□ 2.49
SCARF1-207ENST00000573867 NT5DC1Q5TFE4 455 aa30.61■■■□□ 2.49
SCARF1-207ENST00000573867 EEF1DP3Q658K8 133 aa30.61■■■□□ 2.49
SCARF1-207ENST00000573867 GPBP1Q86WP2 473 aa30.61■■■□□ 2.49
SCARF1-207ENST00000573867 KRI1Q8N9T8 703 aaKnown RBP30.61■■■□□ 2.49
SCARF1-207ENST00000573867 ARHGAP28Q9P2N2 729 aa30.61■■■□□ 2.49
SCARF1-207ENST00000573867 THEGQ9P2T0 379 aa30.61■■■□□ 2.49
SCARF1-207ENST00000573867 PCDHGC5Q9Y5F6 944 aa30.61■■■□□ 2.49
SCARF1-207ENST00000573867 ITGA4P13612 1032 aa30.6■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms