RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 NUP85Q9BW27 656 aa13.18□□□□□ -0.3
PCDHGA9-201ENST00000573521 AGXT2Q9BYV1 514 aa13.18□□□□□ -0.3
PCDHGA9-201ENST00000573521 TRPV6Q9H1D0 765 aa13.18□□□□□ -0.3
PCDHGA9-201ENST00000573521 YY1AP1Q9H869 796 aa13.18□□□□□ -0.3
PCDHGA9-201ENST00000573521 TOPORSQ9NS56 1045 aaPredicted RBP13.18□□□□□ -0.3
PCDHGA9-201ENST00000573521 PPARGC1AQ9UBK2 798 aaKnown RBP13.18□□□□□ -0.3
PCDHGA9-201ENST00000573521 SUN2Q9UH99 717 aa13.18□□□□□ -0.3
PCDHGA9-201ENST00000573521 CIITAP33076 1130 aa13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 PPP2R5CQ13362 524 aa13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 MYBPC2Q14324 1141 aa13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 OXER1Q8TDS5 423 aa13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 KRT35Q92764 455 aa13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 ZBTB18Q99592 522 aa13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 ETNK1Q9HBU6 452 aa13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 STAP1Q9ULZ2 295 aa13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 A0A087WWV3 80 aa13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 PRAMEF22A3QJZ6 481 aa13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 LAMB3Q13751 1172 aa13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 ITIH4Q14624 930 aa13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 FAM47CQ5HY64 1035 aa13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 RARS2Q5T160 578 aaKnown RBP13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 ANKRD40Q6AI12 368 aa13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 RDM1Q8NG50 284 aa13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 CLEC11AQ9Y240 323 aa13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 ANGPTL3Q9Y5C1 460 aa13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 GJA3Q9Y6H8 435 aa13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 MROH2AA6NES4 1674 aa13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 A0A0A6YYK5 440 aaPredicted RBP13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 STXBP3O00186 592 aa13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 CAPRIN2Q6IMN6 1127 aaKnown RBP13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 CAPN12Q6ZSI9 719 aa13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 SERPINB12Q96P63 405 aa13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 ECT2Q9H8V3 914 aa13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 NSMCE4AQ9NXX6 385 aa13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 APEX2Q9UBZ4 518 aa13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 INO80B-WBP1J3KQ70 363 aa13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 KRT14P02533 472 aa13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 MCF2P10911 925 aa13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 PDXDC2PQ6P474 469 aa13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 SIX6OS1Q8N1H7 587 aa13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 DDX47Q9H0S4 455 aaKnown RBP13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 RANBP17Q9H2T7 1088 aaKnown RBP13.17□□□□□ -0.3
PCDHGA9-201ENST00000573521 SRGAP2O75044 1071 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 IRAK1P51617 712 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 TFAMQ00059 246 aaKnown RBP13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 OCA2Q04671 838 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 MAPK6Q16659 721 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 ZBTB9Q96C00 473 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 MTO1Q9Y2Z2 717 aaKnown RBP13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 GOLGA8SH3BPF8 625 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 CYP19A1P11511 503 aaPredicted RBP13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 LSP1P33241 339 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 SCNN1DP51172 638 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 COPS2P61201 443 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 SPOPLQ6IQ16 392 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 EP400NLQ6ZTU2 488 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 GPIHBP1Q8IV16 184 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 REXO1L1PQ8IX06 675 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 C17orf75Q9HAS0 396 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 SEPT10Q9P0V9 454 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 ARHGAP26Q9UNA1 814 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 O00370 1275 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 STAT3P40763 770 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 GPD1LQ8N335 351 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 USP38Q8NB14 1042 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 GDAP1Q8TB36 358 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 NSUN6Q8TEA1 469 aaKnown RBP13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 MAML1Q92585 1016 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 LRRC1Q9BTT6 524 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 PCIF1Q9H4Z3 704 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 BFARQ9NZS9 450 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 HACD3Q9P035 362 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 NYAP2Q9P242 653 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 TBK1Q9UHD2 729 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 MAFGO15525 162 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 CLDN3O15551 220 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 KLHL2O95198 593 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 ARHGDIAP52565 204 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 HDAC4P56524 1084 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 UBE2SQ16763 222 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 PRUNE1Q86TP1 453 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 SPDL1Q96EA4 605 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 DYNLL2Q96FJ2 89 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 EEF2KMTQ96G04 330 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 MASTLQ96GX5 879 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 KIF9Q9HAQ2 790 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 CD209Q9NNX6 404 aa13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 TRPC5Q9UL62 973 aaPredicted RBP13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.16□□□□□ -0.3
PCDHGA9-201ENST00000573521 COL15A1P39059 1388 aa13.15□□□□□ -0.3
PCDHGA9-201ENST00000573521 PHKA2P46019 1235 aa13.15□□□□□ -0.3
PCDHGA9-201ENST00000573521 PEX3P56589 373 aa13.15□□□□□ -0.3
PCDHGA9-201ENST00000573521 MTMR1Q13613 665 aa13.15□□□□□ -0.3
PCDHGA9-201ENST00000573521 GRAMD1BQ3KR37 738 aa13.15□□□□□ -0.3
PCDHGA9-201ENST00000573521 TKFCQ3LXA3 575 aa13.15□□□□□ -0.3
PCDHGA9-201ENST00000573521 NDUFAF2Q8N183 169 aa13.15□□□□□ -0.3
PCDHGA9-201ENST00000573521 CCNYQ8ND76 341 aa13.15□□□□□ -0.3
PCDHGA9-201ENST00000573521 FAM149B1Q96BN6 582 aa13.15□□□□□ -0.3
PCDHGA9-201ENST00000573521 KCNK16Q96T55 309 aa13.15□□□□□ -0.3
PCDHGA9-201ENST00000573521 DNAJC17Q9NVM6 304 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms