RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 CRYBB1P53674 252 aaPredicted RBP8.35□□□□□ -1.07
NUP88-205ENST00000572809 PRKCEQ02156 737 aa8.35□□□□□ -1.07
NUP88-205ENST00000572809 PTSQ03393 145 aa8.35□□□□□ -1.07
NUP88-205ENST00000572809 PAK2Q13177 524 aa8.35□□□□□ -1.07
NUP88-205ENST00000572809 TRIM29Q14134 588 aa8.35□□□□□ -1.07
NUP88-205ENST00000572809 UGCGQ16739 394 aa8.35□□□□□ -1.07
NUP88-205ENST00000572809 KIZQ2M2Z5 673 aa8.35□□□□□ -1.07
NUP88-205ENST00000572809 TMEM266Q2M3C6 531 aa8.35□□□□□ -1.07
NUP88-205ENST00000572809 CRTC2Q53ET0 693 aaPredicted RBP8.35□□□□□ -1.07
NUP88-205ENST00000572809 C4orf48Q5BLP8 95 aa8.35□□□□□ -1.07
NUP88-205ENST00000572809 XKR3Q5GH77 459 aa8.35□□□□□ -1.07
NUP88-205ENST00000572809 EARS2Q5JPH6 523 aaKnown RBP8.35□□□□□ -1.07
NUP88-205ENST00000572809 TMEM164Q5U3C3 297 aa8.35□□□□□ -1.07
NUP88-205ENST00000572809 KRT40Q6A162 431 aa8.35□□□□□ -1.07
NUP88-205ENST00000572809 ANKMY2Q8IV38 441 aa8.35□□□□□ -1.07
NUP88-205ENST00000572809 FIBCD1Q8N539 461 aa8.35□□□□□ -1.07
NUP88-205ENST00000572809 WHAMMQ8TF30 809 aa8.35□□□□□ -1.07
NUP88-205ENST00000572809 ZSCAN31Q96LW9 406 aaPredicted RBP8.35□□□□□ -1.07
NUP88-205ENST00000572809 SAMD11Q96NU1 681 aa8.35□□□□□ -1.07
NUP88-205ENST00000572809 C17orf80Q9BSJ5 609 aa8.35□□□□□ -1.07
NUP88-205ENST00000572809 NIFKQ9BYG3 293 aaKnown RBP8.35□□□□□ -1.07
NUP88-205ENST00000572809 KCNMB3Q9NPA1 279 aa8.35□□□□□ -1.07
NUP88-205ENST00000572809 NOC2LQ9Y3T9 749 aaKnown RBP8.35□□□□□ -1.07
NUP88-205ENST00000572809 MICAL3Q7RTP6 2002 aa8.34□□□□□ -1.07
NUP88-205ENST00000572809 MYH9P35579 1960 aaKnown RBP8.34□□□□□ -1.07
NUP88-205ENST00000572809 EML1O00423 815 aa8.34□□□□□ -1.07
NUP88-205ENST00000572809 DKC1O60832 514 aaKnown RBP eCLIP8.34□□□□□ -1.07
NUP88-205ENST00000572809 GPR32O75388 356 aa8.34□□□□□ -1.07
NUP88-205ENST00000572809 DGKIO75912 1065 aa8.34□□□□□ -1.07
NUP88-205ENST00000572809 STBD1O95210 358 aa8.34□□□□□ -1.07
NUP88-205ENST00000572809 IGHA1P01876 353 aa8.34□□□□□ -1.07
NUP88-205ENST00000572809 STAG3L1P0CL83 205 aa8.34□□□□□ -1.07
NUP88-205ENST00000572809 NLRP11P59045 1033 aaKnown RBP8.34□□□□□ -1.07
NUP88-205ENST00000572809 PSMC5P62195 406 aa8.34□□□□□ -1.07
NUP88-205ENST00000572809 CDC42EP1Q00587 391 aa8.34□□□□□ -1.07
NUP88-205ENST00000572809 TBC1D8BQ0IIM8 1120 aa8.34□□□□□ -1.07
NUP88-205ENST00000572809 PPP2R5CQ13362 524 aa8.34□□□□□ -1.07
NUP88-205ENST00000572809 TARBP2Q15633 366 aaKnown RBP8.34□□□□□ -1.07
NUP88-205ENST00000572809 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.34□□□□□ -1.07
NUP88-205ENST00000572809 EPC2Q52LR7 807 aa8.34□□□□□ -1.07
NUP88-205ENST00000572809 OXLD1Q5BKU9 147 aa8.34□□□□□ -1.07
NUP88-205ENST00000572809 RNFT1Q5M7Z0 435 aa8.34□□□□□ -1.07
NUP88-205ENST00000572809 CCDC83Q8IWF9 413 aa8.34□□□□□ -1.07
NUP88-205ENST00000572809 TMEM192Q8IY95 271 aa8.34□□□□□ -1.07
NUP88-205ENST00000572809 SLFN12Q8IYM2 578 aa8.34□□□□□ -1.07
NUP88-205ENST00000572809 LRRC71Q8N4P6 559 aa8.34□□□□□ -1.07
NUP88-205ENST00000572809 LINC01465Q8N7H1 131 aa8.34□□□□□ -1.07
NUP88-205ENST00000572809 TMEM40Q8WWA1 233 aa8.34□□□□□ -1.07
NUP88-205ENST00000572809 ATXN2LQ8WWM7 1075 aaKnown RBP8.34□□□□□ -1.07
NUP88-205ENST00000572809 HAS1Q92839 578 aa8.34□□□□□ -1.07
NUP88-205ENST00000572809 TNFRSF25Q93038 417 aa8.34□□□□□ -1.07
NUP88-205ENST00000572809 ZNF689Q96CS4 500 aaPredicted RBP8.34□□□□□ -1.07
NUP88-205ENST00000572809 MAP7D2Q96T17 732 aa8.34□□□□□ -1.07
NUP88-205ENST00000572809 PPP1R16BQ96T49 567 aa8.34□□□□□ -1.07
NUP88-205ENST00000572809 KIF2CQ99661 725 aa8.34□□□□□ -1.07
NUP88-205ENST00000572809 LLPHQ9BRT6 129 aaKnown RBP8.34□□□□□ -1.07
NUP88-205ENST00000572809 C1QTNF2Q9BXJ5 285 aa8.34□□□□□ -1.07
NUP88-205ENST00000572809 DNAAF2Q9NVR5 837 aaKnown RBP8.34□□□□□ -1.07
NUP88-205ENST00000572809 ZMIZ1Q9ULJ6 1067 aa8.34□□□□□ -1.07
NUP88-205ENST00000572809 ST3GAL5Q9UNP4 418 aa8.34□□□□□ -1.07
NUP88-205ENST00000572809 AKT3Q9Y243 479 aa8.34□□□□□ -1.07
NUP88-205ENST00000572809 DENND3A2RUS2 1198 aa8.33□□□□□ -1.08
NUP88-205ENST00000572809 FIGNL2A6NMB9 653 aa8.33□□□□□ -1.08
NUP88-205ENST00000572809 H3BNC9 293 aa8.33□□□□□ -1.08
NUP88-205ENST00000572809 RB1P06400 928 aa8.33□□□□□ -1.08
NUP88-205ENST00000572809 P4HBP07237 508 aaKnown RBP8.33□□□□□ -1.08
NUP88-205ENST00000572809 BMPR1AP36894 532 aa8.33□□□□□ -1.08
NUP88-205ENST00000572809 QARSP47897 775 aaKnown RBP8.33□□□□□ -1.08
NUP88-205ENST00000572809 RBM25P49756 843 aaKnown RBP8.33□□□□□ -1.08
NUP88-205ENST00000572809 DNM2P50570 870 aa8.33□□□□□ -1.08
NUP88-205ENST00000572809 CLCN3P51790 818 aa8.33□□□□□ -1.08
NUP88-205ENST00000572809 MRPS5P82675 430 aaKnown RBP8.33□□□□□ -1.08
NUP88-205ENST00000572809 ST3GAL1Q11201 340 aa8.33□□□□□ -1.08
NUP88-205ENST00000572809 GPM6BQ13491 265 aa8.33□□□□□ -1.08
NUP88-205ENST00000572809 BTG3Q14201 252 aaPredicted RBP8.33□□□□□ -1.08
NUP88-205ENST00000572809 EPHA7Q15375 998 aa8.33□□□□□ -1.08
NUP88-205ENST00000572809 SAFBQ15424 915 aaKnown RBP eCLIP8.33□□□□□ -1.08
NUP88-205ENST00000572809 MTERF2Q49AM1 385 aa8.33□□□□□ -1.08
NUP88-205ENST00000572809 NPAS4Q8IUM7 802 aa8.33□□□□□ -1.08
NUP88-205ENST00000572809 DIS3L2Q8IYB7 885 aaKnown RBP8.33□□□□□ -1.08
NUP88-205ENST00000572809 GDPD5Q8WTR4 605 aa8.33□□□□□ -1.08
NUP88-205ENST00000572809 STK32AQ8WU08 396 aa8.33□□□□□ -1.08
NUP88-205ENST00000572809 LINC01599Q8WXQ3 324 aa8.33□□□□□ -1.08
NUP88-205ENST00000572809 EVPLQ92817 2033 aa8.33□□□□□ -1.08
NUP88-205ENST00000572809 OSMRQ99650 979 aa8.33□□□□□ -1.08
NUP88-205ENST00000572809 ADAM2Q99965 735 aa8.33□□□□□ -1.08
NUP88-205ENST00000572809 SH2D3AQ9BRG2 576 aa8.33□□□□□ -1.08
NUP88-205ENST00000572809 ADAMTS10Q9H324 1103 aa8.33□□□□□ -1.08
NUP88-205ENST00000572809 TMX1Q9H3N1 280 aa8.33□□□□□ -1.08
NUP88-205ENST00000572809 ERVK-5Q9HDB9 667 aa8.33□□□□□ -1.08
NUP88-205ENST00000572809 RGS18Q9NS28 235 aa8.33□□□□□ -1.08
NUP88-205ENST00000572809 THEGQ9P2T0 379 aa8.33□□□□□ -1.08
NUP88-205ENST00000572809 VAV3Q9UKW4 847 aa8.33□□□□□ -1.08
NUP88-205ENST00000572809 LRFN2Q9ULH4 789 aa8.33□□□□□ -1.08
NUP88-205ENST00000572809 PCDHA12Q9UN75 941 aa8.33□□□□□ -1.08
NUP88-205ENST00000572809 RWDD3Q9Y3V2 267 aa8.33□□□□□ -1.08
NUP88-205ENST00000572809 PCDHB7Q9Y5E2 793 aa8.33□□□□□ -1.08
NUP88-205ENST00000572809 CDH23Q9H251 3354 aa8.33□□□□□ -1.08
NUP88-205ENST00000572809 CHD9Q3L8U1 2897 aa8.32□□□□□ -1.08
NUP88-205ENST00000572809 SIP14410 1827 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms