RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 MAPK6Q16659 721 aa22.83■■□□□ 1.25
CHMP6-204ENST00000572778 GLB1LQ6UWU2 654 aa22.83■■□□□ 1.25
CHMP6-204ENST00000572778 LRRC55Q6ZSA7 311 aa22.83■■□□□ 1.25
CHMP6-204ENST00000572778 USP49Q70CQ1 688 aa22.83■■□□□ 1.25
CHMP6-204ENST00000572778 MRPL10Q7Z7H8 261 aaKnown RBP22.83■■□□□ 1.25
CHMP6-204ENST00000572778 CDR2LQ86X02 465 aaPredicted RBP22.83■■□□□ 1.25
CHMP6-204ENST00000572778 DAW1Q8N136 415 aa22.83■■□□□ 1.25
CHMP6-204ENST00000572778 KLHL23Q8NBE8 558 aa22.83■■□□□ 1.25
CHMP6-204ENST00000572778 MRPL38Q96DV4 380 aaKnown RBP22.83■■□□□ 1.25
CHMP6-204ENST00000572778 PRIMPOLQ96LW4 560 aa22.83■■□□□ 1.25
CHMP6-204ENST00000572778 TIPINQ9BVW5 301 aa22.83■■□□□ 1.25
CHMP6-204ENST00000572778 CCSER1Q9C0I3 900 aa22.83■■□□□ 1.25
CHMP6-204ENST00000572778 FZD8Q9H461 694 aa22.83■■□□□ 1.25
CHMP6-204ENST00000572778 CWH43Q9H720 699 aa22.83■■□□□ 1.25
CHMP6-204ENST00000572778 ALG13Q9NP73 1137 aaKnown RBP22.83■■□□□ 1.25
CHMP6-204ENST00000572778 INPP5FQ9Y2H2 1132 aa22.83■■□□□ 1.25
CHMP6-204ENST00000572778 CSPG5O95196 566 aa22.82■■□□□ 1.24
CHMP6-204ENST00000572778 PRKCBP05771 671 aa22.82■■□□□ 1.24
CHMP6-204ENST00000572778 LAG3P18627 525 aa22.82■■□□□ 1.24
CHMP6-204ENST00000572778 GUCY2CP25092 1073 aa22.82■■□□□ 1.24
CHMP6-204ENST00000572778 NAALADL2Q58DX5 795 aa22.82■■□□□ 1.24
CHMP6-204ENST00000572778 PPP4R3CPQ6ZMV5 832 aa22.82■■□□□ 1.24
CHMP6-204ENST00000572778 AGMOQ6ZNB7 445 aa22.82■■□□□ 1.24
CHMP6-204ENST00000572778 KRI1Q8N9T8 703 aaKnown RBP22.82■■□□□ 1.24
CHMP6-204ENST00000572778 CNNM3Q8NE01 707 aa22.82■■□□□ 1.24
CHMP6-204ENST00000572778 SYMPKQ92797 1274 aaKnown RBP22.82■■□□□ 1.24
CHMP6-204ENST00000572778 P2RX5Q93086 422 aa22.82■■□□□ 1.24
CHMP6-204ENST00000572778 MRPL9Q9BYD2 267 aaKnown RBP22.82■■□□□ 1.24
CHMP6-204ENST00000572778 TRIM6Q9C030 488 aaPredicted RBP22.82■■□□□ 1.24
CHMP6-204ENST00000572778 PRDM6Q9NQX0 595 aa22.82■■□□□ 1.24
CHMP6-204ENST00000572778 DAXXQ9UER7 740 aaPredicted RBP22.82■■□□□ 1.24
CHMP6-204ENST00000572778 CCDC39Q9UFE4 941 aa22.82■■□□□ 1.24
CHMP6-204ENST00000572778 PLAGL2Q9UPG8 496 aa22.82■■□□□ 1.24
CHMP6-204ENST00000572778 IPPQ9Y573 584 aa22.82■■□□□ 1.24
CHMP6-204ENST00000572778 ITGB1P05556 798 aa22.81■■□□□ 1.24
CHMP6-204ENST00000572778 ITGA4P13612 1032 aa22.81■■□□□ 1.24
CHMP6-204ENST00000572778 NCLP19338 710 aaKnown RBP22.81■■□□□ 1.24
CHMP6-204ENST00000572778 TXLNAP40222 546 aa22.81■■□□□ 1.24
CHMP6-204ENST00000572778 NPTX2P47972 431 aa22.81■■□□□ 1.24
CHMP6-204ENST00000572778 EFNA5P52803 228 aa22.81■■□□□ 1.24
CHMP6-204ENST00000572778 MAPK7Q13164 816 aa22.81■■□□□ 1.24
CHMP6-204ENST00000572778 DMP1Q13316 513 aaPredicted RBP22.81■■□□□ 1.24
CHMP6-204ENST00000572778 PRPF4BQ13523 1007 aaKnown RBP22.81■■□□□ 1.24
CHMP6-204ENST00000572778 FAM187BQ17R55 369 aa22.81■■□□□ 1.24
CHMP6-204ENST00000572778 NOMO2Q5JPE7 1267 aa22.81■■□□□ 1.24
CHMP6-204ENST00000572778 GPBP1Q86WP2 473 aa22.81■■□□□ 1.24
CHMP6-204ENST00000572778 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.81■■□□□ 1.24
CHMP6-204ENST00000572778 COLGALT1Q8NBJ5 622 aa22.81■■□□□ 1.24
CHMP6-204ENST00000572778 LINC00301Q8NCQ3 95 aa22.81■■□□□ 1.24
CHMP6-204ENST00000572778 SMG8Q8ND04 991 aaKnown RBP22.81■■□□□ 1.24
CHMP6-204ENST00000572778 LRRC15Q8TF66 581 aa22.81■■□□□ 1.24
CHMP6-204ENST00000572778 LMAN2LQ9H0V9 348 aa22.81■■□□□ 1.24
CHMP6-204ENST00000572778 RSAD1Q9HA92 442 aa22.81■■□□□ 1.24
CHMP6-204ENST00000572778 BLOC1S4Q9NUP1 217 aa22.81■■□□□ 1.24
CHMP6-204ENST00000572778 KCND2Q9NZV8 630 aa22.81■■□□□ 1.24
CHMP6-204ENST00000572778 USP20Q9Y2K6 914 aa22.81■■□□□ 1.24
CHMP6-204ENST00000572778 MORC2Q9Y6X9 1032 aaPredicted RBP22.81■■□□□ 1.24
CHMP6-204ENST00000572778 MYO9BQ13459 2157 aa22.81■■□□□ 1.24
CHMP6-204ENST00000572778 COL4A4P53420 1690 aaPredicted RBP22.81■■□□□ 1.24
CHMP6-204ENST00000572778 NPHP3-ACAD11A0A0J9YXS1 232 aa22.8■■□□□ 1.24
CHMP6-204ENST00000572778 A0A1B0GUA9 196 aa22.8■■□□□ 1.24
CHMP6-204ENST00000572778 SPTLC2O15270 562 aa22.8■■□□□ 1.24
CHMP6-204ENST00000572778 OFD1O75665 1012 aa22.8■■□□□ 1.24
CHMP6-204ENST00000572778 NPTXRO95502 500 aa22.8■■□□□ 1.24
CHMP6-204ENST00000572778 CACNB1Q02641 598 aaPredicted RBP22.8■■□□□ 1.24
CHMP6-204ENST00000572778 BECN1Q14457 450 aa22.8■■□□□ 1.24
CHMP6-204ENST00000572778 MCM6Q14566 821 aa22.8■■□□□ 1.24
CHMP6-204ENST00000572778 SLC27A1Q6PCB7 646 aa22.8■■□□□ 1.24
CHMP6-204ENST00000572778 THNSL1Q8IYQ7 743 aa22.8■■□□□ 1.24
CHMP6-204ENST00000572778 RAD54LQ92698 747 aa22.8■■□□□ 1.24
CHMP6-204ENST00000572778 ZNF558Q96NG5 402 aa22.8■■□□□ 1.24
CHMP6-204ENST00000572778 APOL6Q9BWW8 343 aa22.8■■□□□ 1.24
CHMP6-204ENST00000572778 CCDC113Q9H0I3 377 aa22.8■■□□□ 1.24
CHMP6-204ENST00000572778 C17orf75Q9HAS0 396 aa22.8■■□□□ 1.24
CHMP6-204ENST00000572778 KMT5AQ9NQR1 393 aa22.8■■□□□ 1.24
CHMP6-204ENST00000572778 HES2Q9Y543 173 aa22.8■■□□□ 1.24
CHMP6-204ENST00000572778 CNTNAP2Q9UHC6 1331 aa22.8■■□□□ 1.24
CHMP6-204ENST00000572778 TTLL13PA6NNM8 815 aa22.79■■□□□ 1.24
CHMP6-204ENST00000572778 K7ERI5 159 aa22.79■■□□□ 1.24
CHMP6-204ENST00000572778 ACKR2O00590 384 aa22.79■■□□□ 1.24
CHMP6-204ENST00000572778 KRT18P05783 430 aaKnown RBP22.79■■□□□ 1.24
CHMP6-204ENST00000572778 PBX3P40426 434 aa22.79■■□□□ 1.24
CHMP6-204ENST00000572778 ARSHQ5FYA8 562 aa22.79■■□□□ 1.24
CHMP6-204ENST00000572778 KCNT2Q6UVM3 1135 aa22.79■■□□□ 1.24
CHMP6-204ENST00000572778 HACE1Q8IYU2 909 aa22.79■■□□□ 1.24
CHMP6-204ENST00000572778 SPPL3Q8TCT6 385 aa22.79■■□□□ 1.24
CHMP6-204ENST00000572778 URGCPQ8TCY9 931 aa22.79■■□□□ 1.24
CHMP6-204ENST00000572778 RSPH1Q8WYR4 309 aa22.79■■□□□ 1.24
CHMP6-204ENST00000572778 LARP4BQ92615 738 aaKnown RBP22.79■■□□□ 1.24
CHMP6-204ENST00000572778 RNF39Q9H2S5 420 aa22.79■■□□□ 1.24
CHMP6-204ENST00000572778 N4BP3O15049 544 aa22.78■■□□□ 1.24
CHMP6-204ENST00000572778 FGF18O76093 207 aa22.78■■□□□ 1.24
CHMP6-204ENST00000572778 PLS3P13797 630 aa22.78■■□□□ 1.24
CHMP6-204ENST00000572778 DDIT3P35638 169 aa22.78■■□□□ 1.24
CHMP6-204ENST00000572778 RNASELQ05823 741 aaKnown RBP22.78■■□□□ 1.24
CHMP6-204ENST00000572778 CSPP1Q1MSJ5 1256 aa22.78■■□□□ 1.24
CHMP6-204ENST00000572778 TIGD5Q53EQ6 642 aa22.78■■□□□ 1.24
CHMP6-204ENST00000572778 RRAGBQ5VZM2 374 aa22.78■■□□□ 1.24
CHMP6-204ENST00000572778 POF1BQ8WVV4 589 aa22.78■■□□□ 1.24
CHMP6-204ENST00000572778 GBP3Q9H0R5 595 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms