RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 FAM187BQ17R55 369 aa15.96■□□□□ 0.15
NPLOC4-209ENST00000572760 KMT5BQ4FZB7 885 aa15.96■□□□□ 0.15
NPLOC4-209ENST00000572760 TWF2Q6IBS0 349 aaKnown RBP15.96■□□□□ 0.15
NPLOC4-209ENST00000572760 CHRDL2Q6WN34 429 aa15.96■□□□□ 0.15
NPLOC4-209ENST00000572760 PPP4R3CPQ6ZMV5 832 aa15.96■□□□□ 0.15
NPLOC4-209ENST00000572760 TMEM161BQ8NDZ6 487 aa15.96■□□□□ 0.15
NPLOC4-209ENST00000572760 SMARCE1Q969G3 411 aa15.96■□□□□ 0.15
NPLOC4-209ENST00000572760 BICD1Q96G01 975 aa15.96■□□□□ 0.15
NPLOC4-209ENST00000572760 ADAM2Q99965 735 aa15.96■□□□□ 0.15
NPLOC4-209ENST00000572760 MRPL4Q9BYD3 311 aaKnown RBP15.96■□□□□ 0.15
NPLOC4-209ENST00000572760 CHST12Q9NRB3 414 aa15.96■□□□□ 0.15
NPLOC4-209ENST00000572760 OLFML3Q9NRN5 406 aa15.96■□□□□ 0.15
NPLOC4-209ENST00000572760 AGPAT5Q9NUQ2 364 aa15.96■□□□□ 0.15
NPLOC4-209ENST00000572760 PCDHB13Q9Y5F0 798 aa15.96■□□□□ 0.15
NPLOC4-209ENST00000572760 RBAK-RBAKDNI3L0D1 243 aa15.95■□□□□ 0.14
NPLOC4-209ENST00000572760 KLRC4O43908 158 aa15.95■□□□□ 0.14
NPLOC4-209ENST00000572760 TSPAN1O60635 241 aa15.95■□□□□ 0.14
NPLOC4-209ENST00000572760 PSMD2Q13200 908 aa15.95■□□□□ 0.14
NPLOC4-209ENST00000572760 ALCAMQ13740 583 aa15.95■□□□□ 0.14
NPLOC4-209ENST00000572760 CAMK4Q16566 473 aa15.95■□□□□ 0.14
NPLOC4-209ENST00000572760 NOTUMQ6P988 496 aa15.95■□□□□ 0.14
NPLOC4-209ENST00000572760 ZNF720Q7Z2F6 126 aa15.95■□□□□ 0.14
NPLOC4-209ENST00000572760 ELOA2Q8IYF1 753 aaPredicted RBP15.95■□□□□ 0.14
NPLOC4-209ENST00000572760 HERVK_113Q902F9 699 aa15.95■□□□□ 0.14
NPLOC4-209ENST00000572760 HPS3Q969F9 1004 aa15.95■□□□□ 0.14
NPLOC4-209ENST00000572760 HVCN1Q96D96 273 aa15.95■□□□□ 0.14
NPLOC4-209ENST00000572760 VWCEQ96DN2 955 aa15.95■□□□□ 0.14
NPLOC4-209ENST00000572760 CPB2Q96IY4 423 aa15.95■□□□□ 0.14
NPLOC4-209ENST00000572760 RNPC3Q96LT9 517 aaKnown RBP15.95■□□□□ 0.14
NPLOC4-209ENST00000572760 CCDC113Q9H0I3 377 aa15.95■□□□□ 0.14
NPLOC4-209ENST00000572760 NUP62CLQ9H1M0 184 aa15.95■□□□□ 0.14
NPLOC4-209ENST00000572760 TMX1Q9H3N1 280 aa15.95■□□□□ 0.14
NPLOC4-209ENST00000572760 C1orf112Q9NSG2 853 aa15.95■□□□□ 0.14
NPLOC4-209ENST00000572760 RMND1Q9NWS8 449 aa15.95■□□□□ 0.14
NPLOC4-209ENST00000572760 EXOC7Q9UPT5 735 aa15.95■□□□□ 0.14
NPLOC4-209ENST00000572760 CITO14578 2027 aa15.95■□□□□ 0.14
NPLOC4-209ENST00000572760 TRIP11Q15643 1979 aa15.95■□□□□ 0.14
NPLOC4-209ENST00000572760 ENPP3O14638 875 aa15.94■□□□□ 0.14
NPLOC4-209ENST00000572760 B4GALT5O43286 388 aa15.94■□□□□ 0.14
NPLOC4-209ENST00000572760 AMHP03971 560 aa15.94■□□□□ 0.14
NPLOC4-209ENST00000572760 ARF4P18085 180 aaPredicted RBP15.94■□□□□ 0.14
NPLOC4-209ENST00000572760 BMP8BP34820 402 aa15.94■□□□□ 0.14
NPLOC4-209ENST00000572760 MATR3P43243 847 aaKnown RBP eCLIP15.94■□□□□ 0.14
NPLOC4-209ENST00000572760 GTF2BQ00403 316 aa15.94■□□□□ 0.14
NPLOC4-209ENST00000572760 SHHQ15465 462 aa15.94■□□□□ 0.14
NPLOC4-209ENST00000572760 TCTN1Q2MV58 587 aa15.94■□□□□ 0.14
NPLOC4-209ENST00000572760 ZC2HC1CQ53FD0 456 aaPredicted RBP15.94■□□□□ 0.14
NPLOC4-209ENST00000572760 C9orf50Q5SZB4 431 aa15.94■□□□□ 0.14
NPLOC4-209ENST00000572760 APBB1IPQ7Z5R6 666 aaPredicted RBP15.94■□□□□ 0.14
NPLOC4-209ENST00000572760 SYCP3Q8IZU3 236 aa15.94■□□□□ 0.14
NPLOC4-209ENST00000572760 GPT2Q8TD30 523 aa15.94■□□□□ 0.14
NPLOC4-209ENST00000572760 ERCC4Q92889 916 aaPredicted RBP15.94■□□□□ 0.14
NPLOC4-209ENST00000572760 ACCSQ96QU6 501 aa15.94■□□□□ 0.14
NPLOC4-209ENST00000572760 ADPGKQ9BRR6 497 aa15.94■□□□□ 0.14
NPLOC4-209ENST00000572760 TCHPQ9BT92 498 aa15.94■□□□□ 0.14
NPLOC4-209ENST00000572760 TRIM6Q9C030 488 aaPredicted RBP15.94■□□□□ 0.14
NPLOC4-209ENST00000572760 ST6GALNAC4Q9H4F1 302 aa15.94■□□□□ 0.14
NPLOC4-209ENST00000572760 SLC39A2Q9NP94 309 aa15.94■□□□□ 0.14
NPLOC4-209ENST00000572760 LRFN2Q9ULH4 789 aa15.94■□□□□ 0.14
NPLOC4-209ENST00000572760 TBX20Q9UMR3 447 aa15.94■□□□□ 0.14
NPLOC4-209ENST00000572760 PCDHA5Q9Y5H7 936 aa15.94■□□□□ 0.14
NPLOC4-209ENST00000572760 SLC4A7Q9Y6M7 1214 aa15.94■□□□□ 0.14
NPLOC4-209ENST00000572760 PTPRSQ13332 1948 aa15.94■□□□□ 0.14
NPLOC4-209ENST00000572760 CNTNAP2Q9UHC6 1331 aa15.94■□□□□ 0.14
NPLOC4-209ENST00000572760 N4BP3O15049 544 aa15.93■□□□□ 0.14
NPLOC4-209ENST00000572760 MGEA5O60502 916 aa15.93■□□□□ 0.14
NPLOC4-209ENST00000572760 PRPF6O94906 941 aaKnown RBP15.93■□□□□ 0.14
NPLOC4-209ENST00000572760 MYBP10242 640 aa15.93■□□□□ 0.14
NPLOC4-209ENST00000572760 LIG4P49917 911 aa15.93■□□□□ 0.14
NPLOC4-209ENST00000572760 DSC3Q14574 896 aa15.93■□□□□ 0.14
NPLOC4-209ENST00000572760 KCNB1Q14721 858 aa15.93■□□□□ 0.14
NPLOC4-209ENST00000572760 AMHR2Q16671 573 aa15.93■□□□□ 0.14
NPLOC4-209ENST00000572760 ATF7IP2Q5U623 682 aa15.93■□□□□ 0.14
NPLOC4-209ENST00000572760 PRPF38BQ5VTL8 546 aaKnown RBP15.93■□□□□ 0.14
NPLOC4-209ENST00000572760 SLC24A5Q71RS6 500 aa15.93■□□□□ 0.14
NPLOC4-209ENST00000572760 CDR2LQ86X02 465 aaPredicted RBP15.93■□□□□ 0.14
NPLOC4-209ENST00000572760 MYOCDQ8IZQ8 938 aa15.93■□□□□ 0.14
NPLOC4-209ENST00000572760 CCDC51Q96ER9 411 aa15.93■□□□□ 0.14
NPLOC4-209ENST00000572760 GSDMAQ96QA5 445 aa15.93■□□□□ 0.14
NPLOC4-209ENST00000572760 FIZ1Q96SL8 496 aa15.93■□□□□ 0.14
NPLOC4-209ENST00000572760 TARS2Q9BW92 718 aaKnown RBP15.93■□□□□ 0.14
NPLOC4-209ENST00000572760 TSPYL2Q9H2G4 693 aaPredicted RBP15.93■□□□□ 0.14
NPLOC4-209ENST00000572760 CLSTN2Q9H4D0 955 aa15.93■□□□□ 0.14
NPLOC4-209ENST00000572760 RGS18Q9NS28 235 aa15.93■□□□□ 0.14
NPLOC4-209ENST00000572760 RNF216Q9NWF9 866 aaPredicted RBP15.93■□□□□ 0.14
NPLOC4-209ENST00000572760 USP20Q9Y2K6 914 aa15.93■□□□□ 0.14
NPLOC4-209ENST00000572760 GBF1Q92538 1859 aa15.93■□□□□ 0.14
NPLOC4-209ENST00000572760 HNRNPDLO14979 420 aaKnown RBP15.92■□□□□ 0.14
NPLOC4-209ENST00000572760 RHOBTB3O94955 611 aa15.92■□□□□ 0.14
NPLOC4-209ENST00000572760 UPP2O95045 317 aa15.92■□□□□ 0.14
NPLOC4-209ENST00000572760 STAG3L1P0CL83 205 aa15.92■□□□□ 0.14
NPLOC4-209ENST00000572760 SKIP12755 728 aa15.92■□□□□ 0.14
NPLOC4-209ENST00000572760 HOXA11P31270 313 aaPredicted RBP15.92■□□□□ 0.14
NPLOC4-209ENST00000572760 WDR5P61964 334 aaKnown RBP15.92■□□□□ 0.14
NPLOC4-209ENST00000572760 L1TD1Q5T7N2 865 aaKnown RBP15.92■□□□□ 0.14
NPLOC4-209ENST00000572760 NT5DC1Q5TFE4 455 aa15.92■□□□□ 0.14
NPLOC4-209ENST00000572760 SLC27A1Q6PCB7 646 aa15.92■□□□□ 0.14
NPLOC4-209ENST00000572760 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.92■□□□□ 0.14
NPLOC4-209ENST00000572760 TAS1R3Q7RTX0 852 aa15.92■□□□□ 0.14
NPLOC4-209ENST00000572760 RTN4RL1Q86UN2 441 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms