RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 MBOAT7Q96N66 472 aa21.52■■□□□ 1.04
NUP88-203ENST00000572019 EP300Q09472 2414 aaPredicted RBP21.51■■□□□ 1.03
NUP88-203ENST00000572019 C2CD2LO14523 706 aa21.51■■□□□ 1.03
NUP88-203ENST00000572019 CDC45O75419 566 aa21.51■■□□□ 1.03
NUP88-203ENST00000572019 AOC1P19801 751 aa21.51■■□□□ 1.03
NUP88-203ENST00000572019 TDGQ13569 410 aa21.51■■□□□ 1.03
NUP88-203ENST00000572019 NKD2Q969F2 451 aaPredicted RBP21.51■■□□□ 1.03
NUP88-203ENST00000572019 TMEM143Q96AN5 459 aa21.51■■□□□ 1.03
NUP88-203ENST00000572019 LARP6Q9BRS8 491 aaKnown RBP21.51■■□□□ 1.03
NUP88-203ENST00000572019 DUSP12Q9UNI6 340 aa21.51■■□□□ 1.03
NUP88-203ENST00000572019 NRP1O14786 923 aa21.5■■□□□ 1.03
NUP88-203ENST00000572019 DTNBO60941 627 aa21.5■■□□□ 1.03
NUP88-203ENST00000572019 SKIP12755 728 aa21.5■■□□□ 1.03
NUP88-203ENST00000572019 DNM2P50570 870 aa21.5■■□□□ 1.03
NUP88-203ENST00000572019 LETM2Q2VYF4 491 aa21.5■■□□□ 1.03
NUP88-203ENST00000572019 POTEGQ6S5H5 508 aa21.5■■□□□ 1.03
NUP88-203ENST00000572019 MRPL10Q7Z7H8 261 aaKnown RBP21.5■■□□□ 1.03
NUP88-203ENST00000572019 CCDC105Q8IYK2 499 aa21.5■■□□□ 1.03
NUP88-203ENST00000572019 ADSSL1Q8N142 457 aa21.5■■□□□ 1.03
NUP88-203ENST00000572019 SIX5Q8N196 739 aa21.5■■□□□ 1.03
NUP88-203ENST00000572019 FBXL16Q8N461 479 aa21.5■■□□□ 1.03
NUP88-203ENST00000572019 RSAD1Q9HA92 442 aa21.5■■□□□ 1.03
NUP88-203ENST00000572019 MAN1C1Q9NR34 630 aa21.5■■□□□ 1.03
NUP88-203ENST00000572019 VAV3Q9UKW4 847 aa21.5■■□□□ 1.03
NUP88-203ENST00000572019 PCDHA4Q9UN74 947 aa21.5■■□□□ 1.03
NUP88-203ENST00000572019 COL4A3BPQ9Y5P4 624 aa21.5■■□□□ 1.03
NUP88-203ENST00000572019 COL4A3Q01955 1670 aa21.5■■□□□ 1.03
NUP88-203ENST00000572019 KRBA1A5PL33 1030 aa21.49■■□□□ 1.03
NUP88-203ENST00000572019 SRGAP2CP0DJJ0 459 aa21.49■■□□□ 1.03
NUP88-203ENST00000572019 RAB27AP51159 221 aa21.49■■□□□ 1.03
NUP88-203ENST00000572019 CDC42EP1Q00587 391 aa21.49■■□□□ 1.03
NUP88-203ENST00000572019 TOB2Q14106 344 aaPredicted RBP21.49■■□□□ 1.03
NUP88-203ENST00000572019 OTOP3Q7RTS5 596 aa21.49■■□□□ 1.03
NUP88-203ENST00000572019 PPFIBP1Q86W92 1011 aa21.49■■□□□ 1.03
NUP88-203ENST00000572019 SMG8Q8ND04 991 aaKnown RBP21.49■■□□□ 1.03
NUP88-203ENST00000572019 ST13P5Q8NFI4 369 aaPredicted RBP21.49■■□□□ 1.03
NUP88-203ENST00000572019 ACSF2Q96CM8 615 aaPredicted RBP21.49■■□□□ 1.03
NUP88-203ENST00000572019 INO80BQ9C086 356 aaPredicted RBP21.49■■□□□ 1.03
NUP88-203ENST00000572019 RNF39Q9H2S5 420 aa21.49■■□□□ 1.03
NUP88-203ENST00000572019 SH3GLB2Q9NR46 395 aa21.49■■□□□ 1.03
NUP88-203ENST00000572019 PRG3Q9Y2Y8 225 aaPredicted RBP21.49■■□□□ 1.03
NUP88-203ENST00000572019 WDR87Q6ZQQ6 2873 aa21.49■■□□□ 1.03
NUP88-203ENST00000572019 SPDYE4A6NLX3 237 aa21.48■■□□□ 1.03
NUP88-203ENST00000572019 RFPL2O75678 378 aa21.48■■□□□ 1.03
NUP88-203ENST00000572019 EFEMP2O95967 443 aa21.48■■□□□ 1.03
NUP88-203ENST00000572019 CFHP08603 1231 aa21.48■■□□□ 1.03
NUP88-203ENST00000572019 EVCP57679 992 aa21.48■■□□□ 1.03
NUP88-203ENST00000572019 PSMC5P62195 406 aa21.48■■□□□ 1.03
NUP88-203ENST00000572019 ANGPT1Q15389 498 aa21.48■■□□□ 1.03
NUP88-203ENST00000572019 INF2Q27J81 1249 aa21.48■■□□□ 1.03
NUP88-203ENST00000572019 DTWD2Q8NBA8 298 aa21.48■■□□□ 1.03
NUP88-203ENST00000572019 URGCPQ8TCY9 931 aa21.48■■□□□ 1.03
NUP88-203ENST00000572019 PRPF31Q8WWY3 499 aaKnown RBP21.48■■□□□ 1.03
NUP88-203ENST00000572019 B3GALT6Q96L58 329 aa21.48■■□□□ 1.03
NUP88-203ENST00000572019 MYADMQ96S97 322 aa21.48■■□□□ 1.03
NUP88-203ENST00000572019 EMILIN2Q9BXX0 1053 aa21.48■■□□□ 1.03
NUP88-203ENST00000572019 EIF2AQ9BY44 585 aaKnown RBP21.48■■□□□ 1.03
NUP88-203ENST00000572019 MIOSQ9NXC5 875 aa21.48■■□□□ 1.03
NUP88-203ENST00000572019 FAN1Q9Y2M0 1017 aa21.48■■□□□ 1.03
NUP88-203ENST00000572019 FANCMQ8IYD8 2048 aa21.48■■□□□ 1.03
NUP88-203ENST00000572019 CACNA1IQ9P0X4 2223 aa21.47■■□□□ 1.03
NUP88-203ENST00000572019 ZBTB39O15060 712 aa21.47■■□□□ 1.03
NUP88-203ENST00000572019 TEX28O15482 410 aa21.47■■□□□ 1.03
NUP88-203ENST00000572019 SPATA31D3P0C874 917 aa21.47■■□□□ 1.03
NUP88-203ENST00000572019 AK2P54819 239 aa21.47■■□□□ 1.03
NUP88-203ENST00000572019 SPATA31D4Q6ZUB0 917 aa21.47■■□□□ 1.03
NUP88-203ENST00000572019 COLGALT2Q8IYK4 626 aa21.47■■□□□ 1.03
NUP88-203ENST00000572019 RNF168Q8IYW5 571 aaPredicted RBP21.47■■□□□ 1.03
NUP88-203ENST00000572019 BLIDQ8IZY5 108 aa21.47■■□□□ 1.03
NUP88-203ENST00000572019 RSPH1Q8WYR4 309 aa21.47■■□□□ 1.03
NUP88-203ENST00000572019 PGBD4Q96DM1 585 aa21.47■■□□□ 1.03
NUP88-203ENST00000572019 DHX33Q9H6R0 707 aaKnown RBP21.47■■□□□ 1.03
NUP88-203ENST00000572019 MRPL17Q9NRX2 175 aaKnown RBP21.47■■□□□ 1.03
NUP88-203ENST00000572019 DDX25Q9UHL0 483 aaKnown RBP21.47■■□□□ 1.03
NUP88-203ENST00000572019 FBXL21Q9UKT6 434 aa21.47■■□□□ 1.03
NUP88-203ENST00000572019 HES2Q9Y543 173 aa21.47■■□□□ 1.03
NUP88-203ENST00000572019 ZNF292O60281 2723 aa21.47■■□□□ 1.03
NUP88-203ENST00000572019 SOD2P04179 222 aa21.46■■□□□ 1.03
NUP88-203ENST00000572019 ALDH2P05091 517 aa21.46■■□□□ 1.03
NUP88-203ENST00000572019 LAMTOR4Q0VGL1 99 aa21.46■■□□□ 1.03
NUP88-203ENST00000572019 C15orf39Q6ZRI6 1047 aa21.46■■□□□ 1.03
NUP88-203ENST00000572019 RPS6KC1Q96S38 1066 aa21.46■■□□□ 1.03
NUP88-203ENST00000572019 TMEM175Q9BSA9 504 aa21.46■■□□□ 1.03
NUP88-203ENST00000572019 HERC2P3Q9BVR0 1158 aa21.46■■□□□ 1.03
NUP88-203ENST00000572019 KCNJ14Q9UNX9 436 aa21.46■■□□□ 1.03
NUP88-203ENST00000572019 MYH15Q9Y2K3 1946 aa21.46■■□□□ 1.03
NUP88-203ENST00000572019 DMXL1Q9Y485 3027 aa21.46■■□□□ 1.03
NUP88-203ENST00000572019 CCDC195A0A1B0GUA6 201 aa21.45■■□□□ 1.02
NUP88-203ENST00000572019 INPPL1O15357 1258 aa21.45■■□□□ 1.02
NUP88-203ENST00000572019 NCLP19338 710 aaKnown RBP21.45■■□□□ 1.02
NUP88-203ENST00000572019 QARSP47897 775 aaKnown RBP21.45■■□□□ 1.02
NUP88-203ENST00000572019 KIAA0319Q5VV43 1072 aa21.45■■□□□ 1.02
NUP88-203ENST00000572019 DAGLBQ8NCG7 672 aa21.45■■□□□ 1.02
NUP88-203ENST00000572019 ZNF707Q96C28 371 aaPredicted RBP21.45■■□□□ 1.02
NUP88-203ENST00000572019 CEP170P1Q96L14 293 aa21.45■■□□□ 1.02
NUP88-203ENST00000572019 ZFP42Q96MM3 310 aa21.45■■□□□ 1.02
NUP88-203ENST00000572019 FAM193BQ96PV7 902 aaPredicted RBP21.45■■□□□ 1.02
NUP88-203ENST00000572019 GAD1Q99259 594 aa21.45■■□□□ 1.02
NUP88-203ENST00000572019 WDR6Q9NNW5 1121 aaKnown RBP21.45■■□□□ 1.02
NUP88-203ENST00000572019 GJB4Q9NTQ9 266 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms