RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 CPB2Q96IY4 423 aa33.68■■■□□ 2.98
CTDNEP1-206ENST00000571409 CD320Q9NPF0 282 aa33.68■■■□□ 2.98
CTDNEP1-206ENST00000571409 CCT6AP40227 531 aaKnown RBP33.67■■■□□ 2.98
CTDNEP1-206ENST00000571409 NCBP1Q09161 790 aaKnown RBP33.67■■■□□ 2.98
CTDNEP1-206ENST00000571409 NOTUMQ6P988 496 aa33.67■■■□□ 2.98
CTDNEP1-206ENST00000571409 NFKBIZQ9BYH8 718 aa33.67■■■□□ 2.98
CTDNEP1-206ENST00000571409 RSAD1Q9HA92 442 aa33.67■■■□□ 2.98
CTDNEP1-206ENST00000571409 LRWD1Q9UFC0 647 aa33.67■■■□□ 2.98
CTDNEP1-206ENST00000571409 CD207Q9UJ71 328 aa33.67■■■□□ 2.98
CTDNEP1-206ENST00000571409 NCOR1O75376 2440 aa33.67■■■□□ 2.98
CTDNEP1-206ENST00000571409 MUTP22033 750 aa33.66■■■□□ 2.98
CTDNEP1-206ENST00000571409 RNASELQ05823 741 aaKnown RBP33.66■■■□□ 2.98
CTDNEP1-206ENST00000571409 URGCPQ8TCY9 931 aa33.66■■■□□ 2.98
CTDNEP1-206ENST00000571409 NRDE2Q9H7Z3 1164 aa33.66■■■□□ 2.98
CTDNEP1-206ENST00000571409 CNTNAP2Q9UHC6 1331 aa33.65■■■□□ 2.98
CTDNEP1-206ENST00000571409 BDP1A6H8Y1 2624 aa33.65■■■□□ 2.98
CTDNEP1-206ENST00000571409 ARHGEF35A5YM69 484 aa33.65■■■□□ 2.98
CTDNEP1-206ENST00000571409 MBTPS2O43462 519 aa33.65■■■□□ 2.98
CTDNEP1-206ENST00000571409 GLP2RO95838 553 aa33.65■■■□□ 2.98
CTDNEP1-206ENST00000571409 AMHR2Q16671 573 aa33.65■■■□□ 2.98
CTDNEP1-206ENST00000571409 DUSP6Q16828 381 aa33.65■■■□□ 2.98
CTDNEP1-206ENST00000571409 TMC7Q7Z402 723 aa33.65■■■□□ 2.98
CTDNEP1-206ENST00000571409 GJD3Q8N144 294 aa33.65■■■□□ 2.98
CTDNEP1-206ENST00000571409 CCDC51Q96ER9 411 aa33.65■■■□□ 2.98
CTDNEP1-206ENST00000571409 MSLNLQ96KJ4 702 aa33.65■■■□□ 2.98
CTDNEP1-206ENST00000571409 CDCA3Q99618 268 aaPredicted RBP33.65■■■□□ 2.98
CTDNEP1-206ENST00000571409 EIF2AQ9BY44 585 aaKnown RBP33.65■■■□□ 2.98
CTDNEP1-206ENST00000571409 NGRNQ9NPE2 291 aaKnown RBP33.65■■■□□ 2.98
CTDNEP1-206ENST00000571409 CLEC1BQ9P126 229 aa33.65■■■□□ 2.98
CTDNEP1-206ENST00000571409 BARX2Q9UMQ3 279 aaPredicted RBP33.65■■■□□ 2.98
CTDNEP1-206ENST00000571409 LRRIQ4A6NIV6 560 aa33.64■■■□□ 2.98
CTDNEP1-206ENST00000571409 NCLP19338 710 aaKnown RBP33.64■■■□□ 2.98
CTDNEP1-206ENST00000571409 SMAD4Q13485 552 aaKnown RBP33.64■■■□□ 2.98
CTDNEP1-206ENST00000571409 PDIA5Q14554 519 aa33.64■■■□□ 2.98
CTDNEP1-206ENST00000571409 ECM1Q16610 540 aa33.64■■■□□ 2.98
CTDNEP1-206ENST00000571409 PADI6Q6TGC4 694 aa33.64■■■□□ 2.98
CTDNEP1-206ENST00000571409 IGSF22Q8N9C0 903 aa33.64■■■□□ 2.98
CTDNEP1-206ENST00000571409 SMG8Q8ND04 991 aaKnown RBP33.64■■■□□ 2.98
CTDNEP1-206ENST00000571409 CNNM3Q8NE01 707 aa33.64■■■□□ 2.98
CTDNEP1-206ENST00000571409 TMEM169Q96HH4 297 aa33.64■■■□□ 2.98
CTDNEP1-206ENST00000571409 RAB34Q9BZG1 259 aa33.64■■■□□ 2.98
CTDNEP1-206ENST00000571409 GBP3Q9H0R5 595 aa33.64■■■□□ 2.98
CTDNEP1-206ENST00000571409 IPPQ9Y573 584 aa33.64■■■□□ 2.98
CTDNEP1-206ENST00000571409 H3BQV1 296 aa33.63■■■□□ 2.97
CTDNEP1-206ENST00000571409 LAD1O00515 517 aa33.63■■■□□ 2.97
CTDNEP1-206ENST00000571409 ARF4P18085 180 aaPredicted RBP33.63■■■□□ 2.97
CTDNEP1-206ENST00000571409 SSTR3P32745 418 aaPredicted RBP33.63■■■□□ 2.97
CTDNEP1-206ENST00000571409 CSRNP2Q9H175 543 aa33.63■■■□□ 2.97
CTDNEP1-206ENST00000571409 EIF4ENIF1Q9NRA8 985 aaKnown RBP33.63■■■□□ 2.97
CTDNEP1-206ENST00000571409 SMC3Q9UQE7 1217 aa33.63■■■□□ 2.97
CTDNEP1-206ENST00000571409 FSD2A1L4K1 749 aa33.62■■■□□ 2.97
CTDNEP1-206ENST00000571409 CARNS1A5YM72 827 aa33.62■■■□□ 2.97
CTDNEP1-206ENST00000571409 HIDE1A8MVS5 230 aa33.62■■■□□ 2.97
CTDNEP1-206ENST00000571409 ITGA4P13612 1032 aa33.62■■■□□ 2.97
CTDNEP1-206ENST00000571409 AFF1P51825 1210 aaKnown RBP33.62■■■□□ 2.97
CTDNEP1-206ENST00000571409 SMAD2Q15796 467 aaKnown RBP33.62■■■□□ 2.97
CTDNEP1-206ENST00000571409 RILPL1Q5EBL4 403 aa33.62■■■□□ 2.97
CTDNEP1-206ENST00000571409 TMEM173Q86WV6 379 aaPredicted RBP33.62■■■□□ 2.97
CTDNEP1-206ENST00000571409 ZNF280BQ86YH2 543 aa33.62■■■□□ 2.97
CTDNEP1-206ENST00000571409 SNX29Q8TEQ0 813 aa33.62■■■□□ 2.97
CTDNEP1-206ENST00000571409 KHSRPQ92945 711 aaKnown RBP eCLIP33.62■■■□□ 2.97
CTDNEP1-206ENST00000571409 DNAJB4Q9UDY4 337 aa33.62■■■□□ 2.97
CTDNEP1-206ENST00000571409 PRKAG3Q9UGI9 489 aa33.62■■■□□ 2.97
CTDNEP1-206ENST00000571409 KIAA1024Q9UPX6 916 aa33.62■■■□□ 2.97
CTDNEP1-206ENST00000571409 STK24Q9Y6E0 443 aa33.62■■■□□ 2.97
CTDNEP1-206ENST00000571409 B4GALT5O43286 388 aa33.61■■■□□ 2.97
CTDNEP1-206ENST00000571409 GALTP07902 379 aa33.61■■■□□ 2.97
CTDNEP1-206ENST00000571409 CYP11B2P19099 503 aa33.61■■■□□ 2.97
CTDNEP1-206ENST00000571409 RBM10P98175 930 aaKnown RBP33.61■■■□□ 2.97
CTDNEP1-206ENST00000571409 VN1R2Q8NFZ6 395 aa33.61■■■□□ 2.97
CTDNEP1-206ENST00000571409 UBN1Q9NPG3 1134 aa33.61■■■□□ 2.97
CTDNEP1-206ENST00000571409 ZSCAN21Q9Y5A6 473 aaPredicted RBP33.61■■■□□ 2.97
CTDNEP1-206ENST00000571409 B4GALT3O60512 393 aa33.6■■■□□ 2.97
CTDNEP1-206ENST00000571409 PRPHP41219 470 aa33.6■■■□□ 2.97
CTDNEP1-206ENST00000571409 COASYQ13057 564 aa33.6■■■□□ 2.97
CTDNEP1-206ENST00000571409 SMC1AQ14683 1233 aaKnown RBP33.6■■■□□ 2.97
CTDNEP1-206ENST00000571409 IGSF21Q96ID5 467 aa33.6■■■□□ 2.97
CTDNEP1-206ENST00000571409 TRIM6Q9C030 488 aaPredicted RBP33.6■■■□□ 2.97
CTDNEP1-206ENST00000571409 BHMT2Q9H2M3 363 aa33.6■■■□□ 2.97
CTDNEP1-206ENST00000571409 DDX19AQ9NUU7 478 aaKnown RBP33.6■■■□□ 2.97
CTDNEP1-206ENST00000571409 KANSL3Q9P2N6 904 aa33.6■■■□□ 2.97
CTDNEP1-206ENST00000571409 HES2Q9Y543 173 aa33.6■■■□□ 2.97
CTDNEP1-206ENST00000571409 DDHD2O94830 711 aa33.59■■■□□ 2.97
CTDNEP1-206ENST00000571409 EYA4O95677 639 aa33.59■■■□□ 2.97
CTDNEP1-206ENST00000571409 SLC11A1P49279 550 aa33.59■■■□□ 2.97
CTDNEP1-206ENST00000571409 ZP2Q05996 745 aa33.59■■■□□ 2.97
CTDNEP1-206ENST00000571409 IL17AQ16552 155 aa33.59■■■□□ 2.97
CTDNEP1-206ENST00000571409 CDCA2Q69YH5 1023 aaPredicted RBP33.59■■■□□ 2.97
CTDNEP1-206ENST00000571409 DTHD1Q6ZMT9 781 aa33.59■■■□□ 2.97
CTDNEP1-206ENST00000571409 ZBTB8OSQ8IWT0 167 aa33.59■■■□□ 2.97
CTDNEP1-206ENST00000571409 ADHFE1Q8IWW8 467 aa33.59■■■□□ 2.97
CTDNEP1-206ENST00000571409 SMRP1Q8NCR6 262 aa33.59■■■□□ 2.97
CTDNEP1-206ENST00000571409 BSNDQ8WZ55 320 aa33.59■■■□□ 2.97
CTDNEP1-206ENST00000571409 RNF39Q9H2S5 420 aa33.59■■■□□ 2.97
CTDNEP1-206ENST00000571409 EPHX3Q9H6B9 360 aa33.59■■■□□ 2.97
CTDNEP1-206ENST00000571409 PP2D1A8MPX8 630 aa33.58■■■□□ 2.97
CTDNEP1-206ENST00000571409 POMCP01189 267 aa33.58■■■□□ 2.97
CTDNEP1-206ENST00000571409 CA8P35219 290 aa33.58■■■□□ 2.97
CTDNEP1-206ENST00000571409 CDR2LQ86X02 465 aaPredicted RBP33.58■■■□□ 2.97
CTDNEP1-206ENST00000571409 VPS52Q8N1B4 723 aa33.58■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms