RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 URGCPQ8TCY9 931 aa16.04■□□□□ 0.16
CIITA-205ENST00000571186 AIFM3Q96NN9 605 aa16.04■□□□□ 0.16
CIITA-205ENST00000571186 KLHL5Q96PQ7 755 aa16.04■□□□□ 0.16
CIITA-205ENST00000571186 FAM193BQ96PV7 902 aaPredicted RBP16.04■□□□□ 0.16
CIITA-205ENST00000571186 VN1R3Q9BXE9 311 aa16.04■□□□□ 0.16
CIITA-205ENST00000571186 C22orf23Q9BZE7 217 aa16.04■□□□□ 0.16
CIITA-205ENST00000571186 SLKQ9H2G2 1235 aaPredicted RBP16.04■□□□□ 0.16
CIITA-205ENST00000571186 SFXN1Q9H9B4 322 aa16.04■□□□□ 0.16
CIITA-205ENST00000571186 PCDHB2Q9Y5E7 798 aa16.04■□□□□ 0.16
CIITA-205ENST00000571186 DMDP11532 3685 aa16.04■□□□□ 0.16
CIITA-205ENST00000571186 EP300Q09472 2414 aaPredicted RBP16.04■□□□□ 0.16
CIITA-205ENST00000571186 TDRD15B5MCY1 1934 aaKnown RBP16.04■□□□□ 0.16
CIITA-205ENST00000571186 PFKFB2O60825 505 aa16.03■□□□□ 0.16
CIITA-205ENST00000571186 MAFO75444 373 aaPredicted RBP16.03■□□□□ 0.16
CIITA-205ENST00000571186 CNPP09543 421 aaKnown RBP16.03■□□□□ 0.16
CIITA-205ENST00000571186 NKD2Q969F2 451 aaPredicted RBP16.03■□□□□ 0.16
CIITA-205ENST00000571186 JPH2Q9BR39 696 aaPredicted RBP16.03■□□□□ 0.16
CIITA-205ENST00000571186 SH3GLB2Q9NR46 395 aa16.03■□□□□ 0.16
CIITA-205ENST00000571186 FBXL21Q9UKT6 434 aa16.03■□□□□ 0.16
CIITA-205ENST00000571186 FAN1Q9Y2M0 1017 aa16.03■□□□□ 0.16
CIITA-205ENST00000571186 GVINP1Q7Z2Y8 2422 aa16.03■□□□□ 0.16
CIITA-205ENST00000571186 DOCK8Q8NF50 2099 aa16.03■□□□□ 0.16
CIITA-205ENST00000571186 CYP3A7-CYP3A51PA0A087WV96 503 aa16.02■□□□□ 0.16
CIITA-205ENST00000571186 STK25O00506 426 aa16.02■□□□□ 0.16
CIITA-205ENST00000571186 C2CD2LO14523 706 aa16.02■□□□□ 0.16
CIITA-205ENST00000571186 PI15O43692 258 aa16.02■□□□□ 0.16
CIITA-205ENST00000571186 B4GALT3O60512 393 aa16.02■□□□□ 0.16
CIITA-205ENST00000571186 DDHD2O94830 711 aa16.02■□□□□ 0.16
CIITA-205ENST00000571186 CTDNEP1O95476 244 aa16.02■□□□□ 0.16
CIITA-205ENST00000571186 TDP2O95551 362 aa16.02■□□□□ 0.16
CIITA-205ENST00000571186 CYP3A7P24462 503 aa16.02■□□□□ 0.16
CIITA-205ENST00000571186 CLCN4P51793 760 aa16.02■□□□□ 0.16
CIITA-205ENST00000571186 FOXK2Q01167 660 aa16.02■□□□□ 0.16
CIITA-205ENST00000571186 ANKRD1Q15327 319 aa16.02■□□□□ 0.16
CIITA-205ENST00000571186 PLA2G4FQ68DD2 849 aa16.02■□□□□ 0.16
CIITA-205ENST00000571186 AGMOQ6ZNB7 445 aa16.02■□□□□ 0.16
CIITA-205ENST00000571186 KCNK12Q9HB15 430 aa16.02■□□□□ 0.16
CIITA-205ENST00000571186 MRPL17Q9NRX2 175 aaKnown RBP16.02■□□□□ 0.16
CIITA-205ENST00000571186 KANSL3Q9P2N6 904 aa16.02■□□□□ 0.16
CIITA-205ENST00000571186 STK39Q9UEW8 545 aa16.02■□□□□ 0.16
CIITA-205ENST00000571186 DOCK6Q96HP0 2047 aa16.02■□□□□ 0.15
CIITA-205ENST00000571186 ZNF292O60281 2723 aa16.01■□□□□ 0.15
CIITA-205ENST00000571186 POMCP01189 267 aa16.01■□□□□ 0.15
CIITA-205ENST00000571186 SRGAP2CP0DJJ0 459 aa16.01■□□□□ 0.15
CIITA-205ENST00000571186 NPR3P17342 541 aa16.01■□□□□ 0.15
CIITA-205ENST00000571186 AFF1P51825 1210 aaKnown RBP16.01■□□□□ 0.15
CIITA-205ENST00000571186 PSMC5P62195 406 aa16.01■□□□□ 0.15
CIITA-205ENST00000571186 LETM2Q2VYF4 491 aa16.01■□□□□ 0.15
CIITA-205ENST00000571186 CWF19L1Q69YN2 538 aaKnown RBP16.01■□□□□ 0.15
CIITA-205ENST00000571186 B3GNT9Q6UX72 402 aa16.01■□□□□ 0.15
CIITA-205ENST00000571186 ANO5Q75V66 913 aa16.01■□□□□ 0.15
CIITA-205ENST00000571186 TRIM22Q8IYM9 498 aa16.01■□□□□ 0.15
CIITA-205ENST00000571186 ADSSL1Q8N142 457 aa16.01■□□□□ 0.15
CIITA-205ENST00000571186 RSAD1Q9HA92 442 aa16.01■□□□□ 0.15
CIITA-205ENST00000571186 IFT122Q9HBG6 1241 aa16.01■□□□□ 0.15
CIITA-205ENST00000571186 AGPAT5Q9NUQ2 364 aa16.01■□□□□ 0.15
CIITA-205ENST00000571186 PCDHA4Q9UN74 947 aa16.01■□□□□ 0.15
CIITA-205ENST00000571186 COL4A3BPQ9Y5P4 624 aa16.01■□□□□ 0.15
CIITA-205ENST00000571186 DCHS1Q96JQ0 3298 aa16■□□□□ 0.15
CIITA-205ENST00000571186 NRP1O14786 923 aa16■□□□□ 0.15
CIITA-205ENST00000571186 LILRB3O75022 631 aa16■□□□□ 0.15
CIITA-205ENST00000571186 MYBP10242 640 aa16■□□□□ 0.15
CIITA-205ENST00000571186 AOC1P19801 751 aa16■□□□□ 0.15
CIITA-205ENST00000571186 RBM25P49756 843 aaKnown RBP16■□□□□ 0.15
CIITA-205ENST00000571186 NPEPPSP55786 919 aa16■□□□□ 0.15
CIITA-205ENST00000571186 ST3GAL1Q11201 340 aa16■□□□□ 0.15
CIITA-205ENST00000571186 CPLX2Q6PUV4 134 aaKnown RBP16■□□□□ 0.15
CIITA-205ENST00000571186 MRPL10Q7Z7H8 261 aaKnown RBP16■□□□□ 0.15
CIITA-205ENST00000571186 BLIDQ8IZY5 108 aa16■□□□□ 0.15
CIITA-205ENST00000571186 SIX5Q8N196 739 aa16■□□□□ 0.15
CIITA-205ENST00000571186 ETNPPLQ8TBG4 499 aa16■□□□□ 0.15
CIITA-205ENST00000571186 PRPF31Q8WWY3 499 aaKnown RBP16■□□□□ 0.15
CIITA-205ENST00000571186 RTP3Q9BQQ7 232 aa16■□□□□ 0.15
CIITA-205ENST00000571186 TMEM175Q9BSA9 504 aa16■□□□□ 0.15
CIITA-205ENST00000571186 GJB4Q9NTQ9 266 aa16■□□□□ 0.15
CIITA-205ENST00000571186 DUSP12Q9UNI6 340 aa16■□□□□ 0.15
CIITA-205ENST00000571186 FRYLO94915 3013 aa16■□□□□ 0.15
CIITA-205ENST00000571186 CCDC195A0A1B0GUA6 201 aa15.99■□□□□ 0.15
CIITA-205ENST00000571186 EML1O00423 815 aa15.99■□□□□ 0.15
CIITA-205ENST00000571186 DEXIO95424 95 aa15.99■□□□□ 0.15
CIITA-205ENST00000571186 URODP06132 367 aa15.99■□□□□ 0.15
CIITA-205ENST00000571186 GBP2P32456 591 aaPredicted RBP15.99■□□□□ 0.15
CIITA-205ENST00000571186 QARSP47897 775 aaKnown RBP15.99■□□□□ 0.15
CIITA-205ENST00000571186 ANGPT1Q15389 498 aa15.99■□□□□ 0.15
CIITA-205ENST00000571186 C15orf39Q6ZRI6 1047 aa15.99■□□□□ 0.15
CIITA-205ENST00000571186 SRGAP1Q7Z6B7 1085 aa15.99■□□□□ 0.15
CIITA-205ENST00000571186 CCDC105Q8IYK2 499 aa15.99■□□□□ 0.15
CIITA-205ENST00000571186 ZNF579Q8NAF0 562 aaKnown RBP15.99■□□□□ 0.15
CIITA-205ENST00000571186 DTWD2Q8NBA8 298 aa15.99■□□□□ 0.15
CIITA-205ENST00000571186 SLC7A3Q8WY07 619 aa15.99■□□□□ 0.15
CIITA-205ENST00000571186 GTF3C6Q969F1 213 aa15.99■□□□□ 0.15
CIITA-205ENST00000571186 TMEM143Q96AN5 459 aa15.99■□□□□ 0.15
CIITA-205ENST00000571186 CEP170P1Q96L14 293 aa15.99■□□□□ 0.15
CIITA-205ENST00000571186 MINDY3Q9H8M7 445 aa15.99■□□□□ 0.15
CIITA-205ENST00000571186 MAN1C1Q9NR34 630 aa15.99■□□□□ 0.15
CIITA-205ENST00000571186 IGSF9Q9P2J2 1179 aa15.99■□□□□ 0.15
CIITA-205ENST00000571186 DDX25Q9UHL0 483 aaKnown RBP15.99■□□□□ 0.15
CIITA-205ENST00000571186 PRG3Q9Y2Y8 225 aaPredicted RBP15.99■□□□□ 0.15
CIITA-205ENST00000571186 CNTNAP2Q9UHC6 1331 aa15.98■□□□□ 0.15
CIITA-205ENST00000571186 NARSO43776 548 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms