RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 CD209Q9NNX6 404 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 CEP72Q9P209 647 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 FAM8A1Q9UBU6 413 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 SAP30BPQ9UHR5 308 aaKnown RBP3.89□□□□□ -1.79
SMG6-208ENST00000570874 SH3BGRL2Q9UJC5 107 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 GGA1Q9UJY5 639 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 KCNH4Q9UQ05 1017 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 ANKRD6Q9Y2G4 727 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 KIF3AQ9Y496 699 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 PCDHGC5Q9Y5F6 944 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 PCDHAC2Q9Y5I4 1007 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 PARP3Q9Y6F1 533 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 ZNFX1Q9P2E3 1918 aaKnown RBP3.89□□□□□ -1.79
SMG6-208ENST00000570874 TNKSO95271 1327 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 C10orf71Q711Q0 1435 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 DOCK1Q14185 1865 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 KLF18A0A0U1RQI7 1052 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 TRIM75PA6NK02 468 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 MINDY4BA8MYZ0 360 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 F8W031 263 aaPredicted RBP3.88□□□□□ -1.79
SMG6-208ENST00000570874 C6orf229H3BNL8 230 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 H7C0S8 307 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 SH2B2O14492 632 aaPredicted RBP3.88□□□□□ -1.79
SMG6-208ENST00000570874 ZNF213O14771 459 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 MCF2LO15068 1137 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 SART1O43290 800 aaKnown RBP3.88□□□□□ -1.79
SMG6-208ENST00000570874 ZBTB43O43298 467 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 MYO1BO43795 1136 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 PPP1R12BO60237 982 aaPredicted RBP3.88□□□□□ -1.79
SMG6-208ENST00000570874 TSPAN3O60637 253 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 GADD45BO75293 160 aaPredicted RBP3.88□□□□□ -1.79
SMG6-208ENST00000570874 TBCAO75347 108 aaKnown RBP3.88□□□□□ -1.79
SMG6-208ENST00000570874 CDKL5O76039 1030 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 MICAL2O94851 1124 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 SNUPNO95149 360 aaKnown RBP3.88□□□□□ -1.79
SMG6-208ENST00000570874 SNX4O95219 450 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 MAP3K6O95382 1288 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 TGDSO95455 350 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 F13A1P00488 732 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 SLC3A2P08195 630 aaKnown RBP3.88□□□□□ -1.79
SMG6-208ENST00000570874 SLURP2P0DP57 97 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 PF4V1P10720 104 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 LORP23490 312 aaPredicted RBP3.88□□□□□ -1.79
SMG6-208ENST00000570874 PDIA3P30101 505 aaKnown RBP3.88□□□□□ -1.79
SMG6-208ENST00000570874 POLR2BP30876 1174 aaKnown RBP3.88□□□□□ -1.79
SMG6-208ENST00000570874 HOXC12P31275 282 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 HNF4AP41235 474 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 MTHFRP42898 656 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 PSMC4P43686 418 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 ASMTP46597 345 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 CTCFP49711 727 aaPredicted RBP3.88□□□□□ -1.79
SMG6-208ENST00000570874 NUCB2P80303 420 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 GUCY1B3Q02153 619 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 PPARAQ07869 468 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 FAPQ12884 760 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 IKQ13123 557 aaPredicted RBP3.88□□□□□ -1.79
SMG6-208ENST00000570874 SEPT6Q14141 434 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 GALEQ14376 348 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 SPARCL1Q14515 664 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 KRT32Q14532 448 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 STAT4Q14765 748 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 ARHGEF6Q15052 776 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 PPP1R7Q15435 360 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 ASIC2Q16515 512 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 IMMTQ16891 758 aaKnown RBP3.88□□□□□ -1.79
SMG6-208ENST00000570874 SHROOM1Q2M3G4 852 aaPredicted RBP3.88□□□□□ -1.79
SMG6-208ENST00000570874 VWA3BQ502W6 1294 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 KRTCAP3Q53RY4 240 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 C1orf53Q5VUE5 145 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 CEP135Q66GS9 1140 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 TTC19Q6DKK2 380 aaPredicted RBP3.88□□□□□ -1.79
SMG6-208ENST00000570874 OTUD7BQ6GQQ9 843 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 PACS1Q6VY07 963 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 GBP6Q6ZN66 633 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 MFSD6Q6ZSS7 791 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 SPATC1Q76KD6 591 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 CCDC80Q76M96 950 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 CEP68Q76N32 757 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 EPM2AIP1Q7L775 607 aaPredicted RBP3.88□□□□□ -1.79
SMG6-208ENST00000570874 GALNTL5Q7Z4T8 443 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 CCDC91Q7Z6B0 441 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 SP8Q8IXZ3 490 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 SLFN12Q8IYM2 578 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 LRRC43Q8N309 656 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 PPM1KQ8N3J5 372 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 CERS5Q8N5B7 392 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 MYCT1Q8N699 235 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 CNTD1Q8N815 330 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 FAM184AQ8NB25 1140 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 ZSCAN1Q8NBB4 408 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 ZNF540Q8NDQ6 660 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 NSUN7Q8NE18 718 aaKnown RBP3.88□□□□□ -1.79
SMG6-208ENST00000570874 NCOA7Q8NI08 942 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 GPT2Q8TD30 523 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 EPS8L3Q8TE67 593 aaKnown RBP3.88□□□□□ -1.79
SMG6-208ENST00000570874 SH3RF3Q8TEJ3 882 aaPredicted RBP3.88□□□□□ -1.79
SMG6-208ENST00000570874 SLC7A3Q8WY07 619 aa3.88□□□□□ -1.79
SMG6-208ENST00000570874 CENPIQ92674 756 aaPredicted RBP3.88□□□□□ -1.79
SMG6-208ENST00000570874 USP13Q92995 863 aaPredicted RBP3.88□□□□□ -1.79
SMG6-208ENST00000570874 CHFRQ96EP1 664 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms