RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 RMDN2Q96LZ7 410 aa16.57■□□□□ 0.24
SMG6-207ENST00000570756 ANKRD2Q9GZV1 360 aa16.57■□□□□ 0.24
SMG6-207ENST00000570756 ANKIB1Q9P2G1 1089 aa16.57■□□□□ 0.24
SMG6-207ENST00000570756 TRIM33Q9UPN9 1127 aa16.57■□□□□ 0.24
SMG6-207ENST00000570756 SNED1Q8TER0 1413 aa16.57■□□□□ 0.24
SMG6-207ENST00000570756 USP17L5A8MUK1 530 aa16.57■□□□□ 0.24
SMG6-207ENST00000570756 CRKLP46109 303 aaKnown RBP16.57■□□□□ 0.24
SMG6-207ENST00000570756 SETDB1Q15047 1291 aa16.57■□□□□ 0.24
SMG6-207ENST00000570756 NBPF20Q3BBV1 942 aa16.57■□□□□ 0.24
SMG6-207ENST00000570756 ARSHQ5FYA8 562 aa16.57■□□□□ 0.24
SMG6-207ENST00000570756 TRIM68Q6AZZ1 485 aa16.57■□□□□ 0.24
SMG6-207ENST00000570756 EPM2AIP1Q7L775 607 aaPredicted RBP16.57■□□□□ 0.24
SMG6-207ENST00000570756 AGGF1Q8N302 714 aaeCLIP16.57■□□□□ 0.242e-11■■■■□ 26.1
SMG6-207ENST00000570756 KCNV2Q8TDN2 545 aa16.57■□□□□ 0.24
SMG6-207ENST00000570756 ARHGEF26Q96DR7 871 aa16.57■□□□□ 0.24
SMG6-207ENST00000570756 MAGEB18Q96M61 343 aa16.57■□□□□ 0.24
SMG6-207ENST00000570756 TSC22D3Q99576 134 aa16.57■□□□□ 0.24
SMG6-207ENST00000570756 THAP2Q9H0W7 228 aa16.57■□□□□ 0.24
SMG6-207ENST00000570756 ALG6Q9Y672 507 aa16.57■□□□□ 0.24
SMG6-207ENST00000570756 TAF1P21675 1872 aa16.56■□□□□ 0.24
SMG6-207ENST00000570756 MPHOSPH10O00566 681 aaKnown RBP16.56■□□□□ 0.24
SMG6-207ENST00000570756 GNAZP19086 355 aa16.56■□□□□ 0.24
SMG6-207ENST00000570756 PCK1P35558 622 aa16.56■□□□□ 0.24
SMG6-207ENST00000570756 CDK8P49336 464 aa16.56■□□□□ 0.24
SMG6-207ENST00000570756 MTFR1Q15390 333 aa16.56■□□□□ 0.24
SMG6-207ENST00000570756 ASPRV1Q53RT3 343 aa16.56■□□□□ 0.24
SMG6-207ENST00000570756 TTC27Q6P3X3 843 aa16.56■□□□□ 0.24
SMG6-207ENST00000570756 C16orf86Q6ZW13 317 aa16.56■□□□□ 0.24
SMG6-207ENST00000570756 OLIG1Q8TAK6 271 aa16.56■□□□□ 0.24
SMG6-207ENST00000570756 ZSWIM1Q9BR11 485 aa16.56■□□□□ 0.24
SMG6-207ENST00000570756 LRMDAQ9H2I8 198 aa16.56■□□□□ 0.24
SMG6-207ENST00000570756 ARHGEF10LQ9HCE6 1279 aa16.56■□□□□ 0.24
SMG6-207ENST00000570756 NKIRAS1Q9NYS0 192 aa16.56■□□□□ 0.24
SMG6-207ENST00000570756 POTEFA5A3E0 1075 aa16.56■□□□□ 0.24
SMG6-207ENST00000570756 POTEIP0CG38 1075 aa16.56■□□□□ 0.24
SMG6-207ENST00000570756 POTEJP0CG39 1038 aa16.56■□□□□ 0.24
SMG6-207ENST00000570756 DRAP1Q14919 205 aaPredicted RBP16.56■□□□□ 0.24
SMG6-207ENST00000570756 CYP1B1Q16678 543 aa16.56■□□□□ 0.24
SMG6-207ENST00000570756 BMT2Q1RMZ1 405 aa16.56■□□□□ 0.24
SMG6-207ENST00000570756 ERFEQ4G0M1 354 aa16.56■□□□□ 0.24
SMG6-207ENST00000570756 POTEEQ6S8J3 1075 aa16.56■□□□□ 0.24
SMG6-207ENST00000570756 SFR1Q86XK3 245 aa16.56■□□□□ 0.24
SMG6-207ENST00000570756 GDAP1Q8TB36 358 aa16.56■□□□□ 0.24
SMG6-207ENST00000570756 CELF1Q92879 486 aaKnown RBP16.56■□□□□ 0.24
SMG6-207ENST00000570756 GJA10Q969M2 543 aa16.56■□□□□ 0.24
SMG6-207ENST00000570756 CEP95Q96GE4 821 aa16.56■□□□□ 0.24
SMG6-207ENST00000570756 SYT11Q9BT88 431 aa16.56■□□□□ 0.24
SMG6-207ENST00000570756 CDC42EP4Q9H3Q1 356 aaKnown RBP16.56■□□□□ 0.24
SMG6-207ENST00000570756 SEPT11Q9NVA2 429 aaKnown RBP16.56■□□□□ 0.24
SMG6-207ENST00000570756 SAP30BPQ9UHR5 308 aaKnown RBP16.56■□□□□ 0.24
SMG6-207ENST00000570756 RTCBQ9Y3I0 505 aaKnown RBP16.56■□□□□ 0.24
SMG6-207ENST00000570756 BTAF1O14981 1849 aa16.56■□□□□ 0.24
SMG6-207ENST00000570756 BRAFP15056 766 aa16.55■□□□□ 0.24
SMG6-207ENST00000570756 ATP6V1C1P21283 382 aa16.55■□□□□ 0.24
SMG6-207ENST00000570756 COILP38432 576 aaPredicted RBP16.55■□□□□ 0.24
SMG6-207ENST00000570756 PPP4CP60510 307 aa16.55■□□□□ 0.24
SMG6-207ENST00000570756 STRN3Q13033 797 aa16.55■□□□□ 0.24
SMG6-207ENST00000570756 GIT2Q14161 759 aa16.55■□□□□ 0.24
SMG6-207ENST00000570756 RRP1BQ14684 758 aaKnown RBP16.55■□□□□ 0.24
SMG6-207ENST00000570756 TSNAXIP1Q2TAA8 658 aa16.55■□□□□ 0.24
SMG6-207ENST00000570756 THEMIS2Q5TEJ8 643 aa16.55■□□□□ 0.24
SMG6-207ENST00000570756 BICDL1Q6ZP65 573 aa16.55■□□□□ 0.24
SMG6-207ENST00000570756 MFN1Q8IWA4 741 aa16.55■□□□□ 0.24
SMG6-207ENST00000570756 PIGOQ8TEQ8 1089 aa16.55■□□□□ 0.24
SMG6-207ENST00000570756 STK32AQ8WU08 396 aa16.55■□□□□ 0.24
SMG6-207ENST00000570756 CTNNAL1Q9UBT7 734 aa16.55■□□□□ 0.24
SMG6-207ENST00000570756 KCNG1Q9UIX4 513 aa16.55■□□□□ 0.24
SMG6-207ENST00000570756 DNAJC12Q9UKB3 198 aa16.55■□□□□ 0.24
SMG6-207ENST00000570756 JAG2Q9Y219 1238 aa16.55■□□□□ 0.24
SMG6-207ENST00000570756 C10orf71Q711Q0 1435 aa16.55■□□□□ 0.24
SMG6-207ENST00000570756 GOLGB1Q14789 3259 aaKnown RBP16.55■□□□□ 0.24
SMG6-207ENST00000570756 SMIM24O75264 130 aa16.55■□□□□ 0.24
SMG6-207ENST00000570756 ACSL3O95573 720 aa16.55■□□□□ 0.24
SMG6-207ENST00000570756 HOXD13P35453 343 aa16.55■□□□□ 0.24
SMG6-207ENST00000570756 CLK2P49760 499 aaKnown RBP16.55■□□□□ 0.24
SMG6-207ENST00000570756 PAPOLAP51003 745 aaKnown RBP16.55■□□□□ 0.24
SMG6-207ENST00000570756 UBE2SQ16763 222 aa16.55■□□□□ 0.24
SMG6-207ENST00000570756 ZNF568Q3ZCX4 644 aa16.55■□□□□ 0.24
SMG6-207ENST00000570756 PPP1R21Q6ZMI0 780 aa16.55■□□□□ 0.24
SMG6-207ENST00000570756 C3orf67Q6ZVT6 689 aa16.55■□□□□ 0.24
SMG6-207ENST00000570756 MAPKAPK5Q8IW41 473 aa16.55■□□□□ 0.24
SMG6-207ENST00000570756 WDR66Q8TBY9 1149 aa16.55■□□□□ 0.24
SMG6-207ENST00000570756 RPS6KC1Q96S38 1066 aa16.55■□□□□ 0.24
SMG6-207ENST00000570756 CYP39A1Q9NYL5 469 aa16.55■□□□□ 0.24
SMG6-207ENST00000570756 COG5Q9UP83 839 aa16.55■□□□□ 0.24
SMG6-207ENST00000570756 FRMPD2Q68DX3 1309 aaPredicted RBP16.54■□□□□ 0.24
SMG6-207ENST00000570756 RAD23BP54727 409 aa16.54■□□□□ 0.24
SMG6-207ENST00000570756 MXRA7P84157 204 aa16.54■□□□□ 0.24
SMG6-207ENST00000570756 LBRQ14739 615 aaKnown RBP16.54■□□□□ 0.24
SMG6-207ENST00000570756 AADACL2Q6P093 401 aa16.54■□□□□ 0.24
SMG6-207ENST00000570756 VSIG1Q86XK7 387 aa16.54■□□□□ 0.24
SMG6-207ENST00000570756 ECHDC2Q86YB7 292 aa16.54■□□□□ 0.24
SMG6-207ENST00000570756 MORC4Q8TE76 937 aa16.54■□□□□ 0.24
SMG6-207ENST00000570756 INPP5DQ92835 1189 aa16.54■□□□□ 0.24
SMG6-207ENST00000570756 MLXIPLQ9NP71 852 aa16.54■□□□□ 0.24
SMG6-207ENST00000570756 PAPOLBQ9NRJ5 636 aaKnown RBP16.54■□□□□ 0.24
SMG6-207ENST00000570756 CTTNBP2NLQ9P2B4 639 aa16.54■□□□□ 0.24
SMG6-207ENST00000570756 PTPN22Q9Y2R2 807 aa16.54■□□□□ 0.24
SMG6-207ENST00000570756 PCDHB13Q9Y5F0 798 aa16.54■□□□□ 0.24
SMG6-207ENST00000570756 ASTN1O14525 1302 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms