RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 USP28Q96RU2 1077 aa16.79■□□□□ 0.28
RAB40B-203ENST00000570676 EPHX3Q9H6B9 360 aa16.79■□□□□ 0.28
RAB40B-203ENST00000570676 CD207Q9UJ71 328 aa16.79■□□□□ 0.28
RAB40B-203ENST00000570676 CFAP45Q9UL16 551 aa16.79■□□□□ 0.28
RAB40B-203ENST00000570676 PCDHB6Q9Y5E3 794 aa16.79■□□□□ 0.28
RAB40B-203ENST00000570676 CLIC4Q9Y696 253 aa16.79■□□□□ 0.28
RAB40B-203ENST00000570676 MYH15Q9Y2K3 1946 aa16.78■□□□□ 0.28
RAB40B-203ENST00000570676 ASAP2O43150 1006 aa16.78■□□□□ 0.28
RAB40B-203ENST00000570676 MED24O75448 989 aa16.78■□□□□ 0.28
RAB40B-203ENST00000570676 DGAT1O75907 488 aa16.78■□□□□ 0.28
RAB40B-203ENST00000570676 OR52Z1P0C646 297 aa16.78■□□□□ 0.28
RAB40B-203ENST00000570676 SKIP12755 728 aa16.78■□□□□ 0.28
RAB40B-203ENST00000570676 RBM10P98175 930 aaKnown RBP16.78■□□□□ 0.28
RAB40B-203ENST00000570676 CAPSQ13938 189 aa16.78■□□□□ 0.28
RAB40B-203ENST00000570676 DUSP6Q16828 381 aa16.78■□□□□ 0.28
RAB40B-203ENST00000570676 LONRF3Q496Y0 759 aa16.78■□□□□ 0.28
RAB40B-203ENST00000570676 PLPP4Q5VZY2 271 aa16.78■□□□□ 0.28
RAB40B-203ENST00000570676 PDE12Q6L8Q7 609 aaKnown RBP16.78■□□□□ 0.28
RAB40B-203ENST00000570676 PIGOQ8TEQ8 1089 aa16.78■□□□□ 0.28
RAB40B-203ENST00000570676 RSPH1Q8WYR4 309 aa16.78■□□□□ 0.28
RAB40B-203ENST00000570676 TBC1D13Q9NVG8 400 aa16.78■□□□□ 0.28
RAB40B-203ENST00000570676 PRKAG3Q9UGI9 489 aa16.78■□□□□ 0.28
RAB40B-203ENST00000570676 BARX2Q9UMQ3 279 aaPredicted RBP16.78■□□□□ 0.28
RAB40B-203ENST00000570676 FAM50BQ9Y247 325 aa16.78■□□□□ 0.28
RAB40B-203ENST00000570676 A0A087WWV3 80 aa16.77■□□□□ 0.28
RAB40B-203ENST00000570676 C19orf67A6NJJ6 358 aa16.77■□□□□ 0.28
RAB40B-203ENST00000570676 B4GALT3O60512 393 aa16.77■□□□□ 0.28
RAB40B-203ENST00000570676 TSPAN1O60635 241 aa16.77■□□□□ 0.28
RAB40B-203ENST00000570676 EYA4O95677 639 aa16.77■□□□□ 0.28
RAB40B-203ENST00000570676 ARL2P36404 184 aa16.77■□□□□ 0.28
RAB40B-203ENST00000570676 PTENP60484 403 aa16.77■□□□□ 0.28
RAB40B-203ENST00000570676 COASYQ13057 564 aa16.77■□□□□ 0.28
RAB40B-203ENST00000570676 KCNC3Q14003 757 aa16.77■□□□□ 0.28
RAB40B-203ENST00000570676 MXD4Q14582 209 aaPredicted RBP16.77■□□□□ 0.28
RAB40B-203ENST00000570676 SF3A1Q15459 793 aaKnown RBP16.77■□□□□ 0.28
RAB40B-203ENST00000570676 AGMOQ6ZNB7 445 aa16.77■□□□□ 0.28
RAB40B-203ENST00000570676 MRPL10Q7Z7H8 261 aaKnown RBP16.77■□□□□ 0.28
RAB40B-203ENST00000570676 TMEM173Q86WV6 379 aaPredicted RBP16.77■□□□□ 0.28
RAB40B-203ENST00000570676 CATSPER3Q86XQ3 398 aa16.77■□□□□ 0.28
RAB40B-203ENST00000570676 SMRP1Q8NCR6 262 aa16.77■□□□□ 0.28
RAB40B-203ENST00000570676 GBP4Q96PP9 640 aa16.77■□□□□ 0.28
RAB40B-203ENST00000570676 TCF25Q9BQ70 676 aa16.77■□□□□ 0.28
RAB40B-203ENST00000570676 C1QTNF1Q9BXJ1 281 aa16.77■□□□□ 0.28
RAB40B-203ENST00000570676 TLE6Q9H808 572 aa16.77■□□□□ 0.28
RAB40B-203ENST00000570676 TUFT1Q9NNX1 390 aa16.77■□□□□ 0.28
RAB40B-203ENST00000570676 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.77■□□□□ 0.28
RAB40B-203ENST00000570676 SPG21Q9NZD8 308 aa16.77■□□□□ 0.28
RAB40B-203ENST00000570676 PCDHB2Q9Y5E7 798 aa16.77■□□□□ 0.28
RAB40B-203ENST00000570676 HIDE1A8MVS5 230 aa16.76■□□□□ 0.27
RAB40B-203ENST00000570676 PER2O15055 1255 aa16.76■□□□□ 0.27
RAB40B-203ENST00000570676 USO1O60763 962 aaKnown RBP16.76■□□□□ 0.27
RAB40B-203ENST00000570676 OFD1O75665 1012 aa16.76■□□□□ 0.27
RAB40B-203ENST00000570676 GLRA2P23416 452 aa16.76■□□□□ 0.27
RAB40B-203ENST00000570676 NASPP49321 788 aaPredicted RBP16.76■□□□□ 0.27
RAB40B-203ENST00000570676 BCAR1P56945 870 aa16.76■□□□□ 0.27
RAB40B-203ENST00000570676 MBTD1Q05BQ5 628 aa16.76■□□□□ 0.27
RAB40B-203ENST00000570676 AMHR2Q16671 573 aa16.76■□□□□ 0.27
RAB40B-203ENST00000570676 NOMO2Q5JPE7 1267 aa16.76■□□□□ 0.27
RAB40B-203ENST00000570676 GLB1LQ6UWU2 654 aa16.76■□□□□ 0.27
RAB40B-203ENST00000570676 CLEC17AQ6ZS10 378 aa16.76■□□□□ 0.27
RAB40B-203ENST00000570676 ADHFE1Q8IWW8 467 aa16.76■□□□□ 0.27
RAB40B-203ENST00000570676 MICAL1Q8TDZ2 1067 aa16.76■□□□□ 0.27
RAB40B-203ENST00000570676 CCDC43Q96MW1 224 aaKnown RBP16.76■□□□□ 0.27
RAB40B-203ENST00000570676 CDCA3Q99618 268 aaPredicted RBP16.76■□□□□ 0.27
RAB40B-203ENST00000570676 POLR3CQ9BUI4 534 aaPredicted RBP16.76■□□□□ 0.27
RAB40B-203ENST00000570676 POLR3FQ9H1D9 316 aaPredicted RBP16.76■□□□□ 0.27
RAB40B-203ENST00000570676 NRDE2Q9H7Z3 1164 aa16.76■□□□□ 0.27
RAB40B-203ENST00000570676 C11orf16Q9NQ32 467 aa16.76■□□□□ 0.27
RAB40B-203ENST00000570676 ENTPD7Q9NQZ7 604 aa16.76■□□□□ 0.27
RAB40B-203ENST00000570676 INPP5FQ9Y2H2 1132 aa16.76■□□□□ 0.27
RAB40B-203ENST00000570676 CNTNAP2Q9UHC6 1331 aa16.75■□□□□ 0.27
RAB40B-203ENST00000570676 FSD2A1L4K1 749 aa16.75■□□□□ 0.27
RAB40B-203ENST00000570676 NT5C1B-RDH14C9J2C7 533 aa16.75■□□□□ 0.27
RAB40B-203ENST00000570676 PI4K2BG5E9Z4 385 aa16.75■□□□□ 0.27
RAB40B-203ENST00000570676 ZC3H11AO75152 810 aaKnown RBP eCLIP16.75■□□□□ 0.27
RAB40B-203ENST00000570676 ERLIN2O94905 339 aa16.75■□□□□ 0.27
RAB40B-203ENST00000570676 YEATS4O95619 227 aa16.75■□□□□ 0.27
RAB40B-203ENST00000570676 BMP15O95972 392 aa16.75■□□□□ 0.27
RAB40B-203ENST00000570676 XRCC6P12956 609 aaKnown RBP eCLIP16.75■□□□□ 0.27
RAB40B-203ENST00000570676 SSTR3P32745 418 aaPredicted RBP16.75■□□□□ 0.27
RAB40B-203ENST00000570676 TECP42680 631 aa16.75■□□□□ 0.27
RAB40B-203ENST00000570676 POU5F1BQ06416 359 aa16.75■□□□□ 0.27
RAB40B-203ENST00000570676 TFDP1Q14186 410 aa16.75■□□□□ 0.27
RAB40B-203ENST00000570676 STK38Q15208 465 aa16.75■□□□□ 0.27
RAB40B-203ENST00000570676 PCBP1Q15365 356 aaKnown RBP eCLIP16.75■□□□□ 0.27
RAB40B-203ENST00000570676 POTEGQ6S5H5 508 aa16.75■□□□□ 0.27
RAB40B-203ENST00000570676 C4orf32Q8N8J7 132 aa16.75■□□□□ 0.27
RAB40B-203ENST00000570676 SMG8Q8ND04 991 aaKnown RBP16.75■□□□□ 0.27
RAB40B-203ENST00000570676 BCL7CQ8WUZ0 217 aaPredicted RBP16.75■□□□□ 0.27
RAB40B-203ENST00000570676 PGBD4Q96DM1 585 aa16.75■□□□□ 0.27
RAB40B-203ENST00000570676 EIF2AQ9BY44 585 aaKnown RBP16.75■□□□□ 0.27
RAB40B-203ENST00000570676 NFKBIZQ9BYH8 718 aa16.75■□□□□ 0.27
RAB40B-203ENST00000570676 SCAND2PQ9GZW5 306 aaPredicted RBP16.75■□□□□ 0.27
RAB40B-203ENST00000570676 RSAD1Q9HA92 442 aa16.75■□□□□ 0.27
RAB40B-203ENST00000570676 NGRNQ9NPE2 291 aaKnown RBP16.75■□□□□ 0.27
RAB40B-203ENST00000570676 GPRC5CQ9NQ84 441 aa16.75■□□□□ 0.27
RAB40B-203ENST00000570676 DNAJB4Q9UDY4 337 aa16.75■□□□□ 0.27
RAB40B-203ENST00000570676 PUF60Q9UHX1 559 aaKnown RBP16.75■□□□□ 0.27
RAB40B-203ENST00000570676 DBR1Q9UK59 544 aaKnown RBP16.75■□□□□ 0.27
RAB40B-203ENST00000570676 RPA1P27694 616 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms