RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 ZNF564Q8TBZ8 553 aaPredicted RBP16.48■□□□□ 0.23
USP43-202ENST00000570475 FAM163AQ96GL9 167 aaPredicted RBP16.48■□□□□ 0.23
USP43-202ENST00000570475 DDX23Q9BUQ8 820 aaKnown RBP16.48■□□□□ 0.23
USP43-202ENST00000570475 ANAPC7Q9UJX3 599 aa16.48■□□□□ 0.23
USP43-202ENST00000570475 COG5Q9UP83 839 aa16.48■□□□□ 0.23
USP43-202ENST00000570475 POC1B-GALNT4F8VUJ3 575 aa16.47■□□□□ 0.23
USP43-202ENST00000570475 TOM1O60784 492 aa16.47■□□□□ 0.23
USP43-202ENST00000570475 SCTRP47872 440 aa16.47■□□□□ 0.23
USP43-202ENST00000570475 NPEPPSP55786 919 aa16.47■□□□□ 0.23
USP43-202ENST00000570475 SOX10P56693 466 aa16.47■□□□□ 0.23
USP43-202ENST00000570475 SEPT7Q16181 437 aaKnown RBP16.47■□□□□ 0.23
USP43-202ENST00000570475 SRRM1Q8IYB3 904 aaKnown RBP16.47■□□□□ 0.23
USP43-202ENST00000570475 HAUS1Q96CS2 278 aa16.47■□□□□ 0.23
USP43-202ENST00000570475 OSBPL7Q9BZF2 842 aa16.47■□□□□ 0.23
USP43-202ENST00000570475 VCPKMTQ9H867 229 aa16.47■□□□□ 0.23
USP43-202ENST00000570475 EHMT1Q9H9B1 1298 aa16.47■□□□□ 0.23
USP43-202ENST00000570475 SIX2Q9NPC8 291 aa16.47■□□□□ 0.23
USP43-202ENST00000570475 FGFR1OP2Q9NVK5 253 aa16.47■□□□□ 0.23
USP43-202ENST00000570475 ROBO1Q9Y6N7 1651 aa16.47■□□□□ 0.23
USP43-202ENST00000570475 ECEL1O95672 775 aa16.47■□□□□ 0.23
USP43-202ENST00000570475 PYGMP11217 842 aa16.47■□□□□ 0.23
USP43-202ENST00000570475 MAPK7Q13164 816 aa16.47■□□□□ 0.23
USP43-202ENST00000570475 KYNUQ16719 465 aa16.47■□□□□ 0.23
USP43-202ENST00000570475 AOC3Q16853 763 aa16.47■□□□□ 0.23
USP43-202ENST00000570475 SLC47A2Q86VL8 602 aa16.47■□□□□ 0.23
USP43-202ENST00000570475 MREGQ8N565 214 aa16.47■□□□□ 0.23
USP43-202ENST00000570475 ARHGEF2Q92974 986 aaKnown RBP16.47■□□□□ 0.23
USP43-202ENST00000570475 TOPORSQ9NS56 1045 aaPredicted RBP16.47■□□□□ 0.23
USP43-202ENST00000570475 CCPG1Q9ULG6 757 aa16.47■□□□□ 0.23
USP43-202ENST00000570475 TTC7AQ9ULT0 858 aaPredicted RBP16.47■□□□□ 0.23
USP43-202ENST00000570475 PASKQ96RG2 1323 aa16.47■□□□□ 0.23
USP43-202ENST00000570475 TCP11X1B4DZS4 312 aa16.46■□□□□ 0.23
USP43-202ENST00000570475 MAPK4P31152 587 aa16.46■□□□□ 0.23
USP43-202ENST00000570475 CEP55Q53EZ4 464 aa16.46■□□□□ 0.23
USP43-202ENST00000570475 PLA2G4FQ68DD2 849 aa16.46■□□□□ 0.23
USP43-202ENST00000570475 RNF207Q6ZRF8 634 aa16.46■□□□□ 0.23
USP43-202ENST00000570475 ZNF720Q7Z2F6 126 aa16.46■□□□□ 0.23
USP43-202ENST00000570475 C9orf72Q96LT7 481 aa16.46■□□□□ 0.23
USP43-202ENST00000570475 WDR18Q9BV38 432 aa16.46■□□□□ 0.23
USP43-202ENST00000570475 MMP10P09238 476 aa16.46■□□□□ 0.23
USP43-202ENST00000570475 ATF7P17544 494 aaPredicted RBP16.46■□□□□ 0.23
USP43-202ENST00000570475 TAOK1Q7L7X3 1001 aa16.46■□□□□ 0.23
USP43-202ENST00000570475 POMGNT1Q8WZA1 660 aa16.46■□□□□ 0.23
USP43-202ENST00000570475 PABPC3Q9H361 631 aaKnown RBP16.46■□□□□ 0.23
USP43-202ENST00000570475 UNC45AQ9H3U1 944 aa16.46■□□□□ 0.23
USP43-202ENST00000570475 CTNNAL1Q9UBT7 734 aa16.46■□□□□ 0.23
USP43-202ENST00000570475 TNNI1P19237 187 aa16.46■□□□□ 0.23
USP43-202ENST00000570475 PDE6CP51160 858 aa16.46■□□□□ 0.23
USP43-202ENST00000570475 LLGL2Q6P1M3 1020 aa16.46■□□□□ 0.23
USP43-202ENST00000570475 PRUNE1Q86TP1 453 aa16.46■□□□□ 0.23
USP43-202ENST00000570475 NCAPGQ9BPX3 1015 aa16.46■□□□□ 0.23
USP43-202ENST00000570475 CEP83Q9Y592 693 aa16.46■□□□□ 0.23
USP43-202ENST00000570475 SREBF1P36956 1147 aa16.45■□□□□ 0.22
USP43-202ENST00000570475 EIF3BP55884 814 aaKnown RBP16.45■□□□□ 0.22
USP43-202ENST00000570475 RHOT2Q8IXI1 618 aa16.45■□□□□ 0.22
USP43-202ENST00000570475 SP8Q8IXZ3 490 aa16.45■□□□□ 0.22
USP43-202ENST00000570475 CPA5Q8WXQ8 436 aa16.45■□□□□ 0.22
USP43-202ENST00000570475 PLVAPQ9BX97 442 aa16.45■□□□□ 0.22
USP43-202ENST00000570475 NKIRAS1Q9NYS0 192 aa16.45■□□□□ 0.22
USP43-202ENST00000570475 MYO3BQ8WXR4 1341 aa16.45■□□□□ 0.22
USP43-202ENST00000570475 SLC16A3O15427 465 aaKnown RBP16.45■□□□□ 0.22
USP43-202ENST00000570475 ECHS1P30084 290 aa16.45■□□□□ 0.22
USP43-202ENST00000570475 PPP3CAQ08209 521 aa16.45■□□□□ 0.22
USP43-202ENST00000570475 BYSLQ13895 437 aaKnown RBP16.45■□□□□ 0.22
USP43-202ENST00000570475 DCAF12L1Q5VU92 463 aa16.45■□□□□ 0.22
USP43-202ENST00000570475 CD302Q8IX05 232 aa16.45■□□□□ 0.22
USP43-202ENST00000570475 PRPF38AQ8NAV1 312 aaKnown RBP16.45■□□□□ 0.22
USP43-202ENST00000570475 RNF25Q96BH1 459 aaPredicted RBP16.45■□□□□ 0.22
USP43-202ENST00000570475 HES6Q96HZ4 224 aa16.45■□□□□ 0.22
USP43-202ENST00000570475 HOMER3Q9NSC5 361 aa16.45■□□□□ 0.22
USP43-202ENST00000570475 NYAP2Q9P242 653 aa16.45■□□□□ 0.22
USP43-202ENST00000570475 BCORQ6W2J9 1755 aa16.45■□□□□ 0.22
USP43-202ENST00000570475 PTENP60484 403 aa16.45■□□□□ 0.22
USP43-202ENST00000570475 MYO1EQ12965 1108 aa16.45■□□□□ 0.22
USP43-202ENST00000570475 OTOP1Q7RTM1 612 aa16.45■□□□□ 0.22
USP43-202ENST00000570475 CBWD2Q8IUF1 395 aa16.45■□□□□ 0.22
USP43-202ENST00000570475 SEPT12Q8IYM1 358 aa16.45■□□□□ 0.22
USP43-202ENST00000570475 CNPY4Q8N129 248 aa16.45■□□□□ 0.22
USP43-202ENST00000570475 AGBL1Q96MI9 1066 aa16.45■□□□□ 0.22
USP43-202ENST00000570475 CARD9Q9H257 536 aa16.45■□□□□ 0.22
USP43-202ENST00000570475 CNOT10Q9H9A5 744 aaKnown RBP16.45■□□□□ 0.22
USP43-202ENST00000570475 TRPC6Q9Y210 931 aa16.45■□□□□ 0.22
USP43-202ENST00000570475 CTNNA2P26232 953 aa16.44■□□□□ 0.22
USP43-202ENST00000570475 PRKCIP41743 596 aa16.44■□□□□ 0.22
USP43-202ENST00000570475 KRT17Q04695 432 aa16.44■□□□□ 0.22
USP43-202ENST00000570475 ANKRD20A8PQ5CZ79 823 aa16.44■□□□□ 0.22
USP43-202ENST00000570475 AGBL2Q5U5Z8 902 aa16.44■□□□□ 0.22
USP43-202ENST00000570475 XXYLT1Q8NBI6 393 aa16.44■□□□□ 0.22
USP43-202ENST00000570475 KLHL29Q96CT2 875 aa16.44■□□□□ 0.22
USP43-202ENST00000570475 PRMT6Q96LA8 375 aaPredicted RBP16.44■□□□□ 0.22
USP43-202ENST00000570475 STMN4Q9H169 189 aaPredicted RBP16.44■□□□□ 0.22
USP43-202ENST00000570475 ACTR5Q9H9F9 607 aaPredicted RBP16.44■□□□□ 0.22
USP43-202ENST00000570475 SYNGAP1Q96PV0 1343 aa16.44■□□□□ 0.22
USP43-202ENST00000570475 DOT1LQ8TEK3 1739 aa16.44■□□□□ 0.22
USP43-202ENST00000570475 PPIP5K2O43314 1243 aa16.44■□□□□ 0.22
USP43-202ENST00000570475 ECE2O60344 883 aa16.44■□□□□ 0.22
USP43-202ENST00000570475 SPAG7O75391 227 aa16.44■□□□□ 0.22
USP43-202ENST00000570475 CREB1P16220 341 aa16.44■□□□□ 0.22
USP43-202ENST00000570475 KRT15P19012 456 aa16.44■□□□□ 0.22
USP43-202ENST00000570475 CDC25CP30307 473 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms