RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 TMEM132AQ24JP5 1023 aa9.93□□□□□ -0.82
NPLOC4-204ENST00000570324 TPRNQ4KMQ1 711 aa9.93□□□□□ -0.82
NPLOC4-204ENST00000570324 CES5AQ6NT32 575 aa9.93□□□□□ -0.82
NPLOC4-204ENST00000570324 NOTUMQ6P988 496 aa9.93□□□□□ -0.82
NPLOC4-204ENST00000570324 MAEAQ7L5Y9 396 aa9.93□□□□□ -0.82
NPLOC4-204ENST00000570324 VPS52Q8N1B4 723 aa9.93□□□□□ -0.82
NPLOC4-204ENST00000570324 MRPL43Q8N983 215 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-204ENST00000570324 FAM122AQ96E09 287 aa9.93□□□□□ -0.82
NPLOC4-204ENST00000570324 RPGRIP1Q96KN7 1286 aa9.93□□□□□ -0.82
NPLOC4-204ENST00000570324 HSD17B14Q9BPX1 270 aa9.93□□□□□ -0.82
NPLOC4-204ENST00000570324 APOL5Q9BWW9 433 aa9.93□□□□□ -0.82
NPLOC4-204ENST00000570324 PHF7Q9BWX1 381 aaPredicted RBP9.93□□□□□ -0.82
NPLOC4-204ENST00000570324 NRDE2Q9H7Z3 1164 aa9.93□□□□□ -0.82
NPLOC4-204ENST00000570324 MINDY3Q9H8M7 445 aa9.93□□□□□ -0.82
NPLOC4-204ENST00000570324 SH2B1Q9NRF2 756 aaPredicted RBP9.93□□□□□ -0.82
NPLOC4-204ENST00000570324 FAN1Q9Y2M0 1017 aa9.93□□□□□ -0.82
NPLOC4-204ENST00000570324 ARID2Q68CP9 1835 aa9.92□□□□□ -0.82
NPLOC4-204ENST00000570324 LRRIQ4A6NIV6 560 aa9.92□□□□□ -0.82
NPLOC4-204ENST00000570324 MEIS3P2A8K0S8 358 aa9.92□□□□□ -0.82
NPLOC4-204ENST00000570324 USO1O60763 962 aaKnown RBP9.92□□□□□ -0.82
NPLOC4-204ENST00000570324 OFD1O75665 1012 aa9.92□□□□□ -0.82
NPLOC4-204ENST00000570324 POMCP01189 267 aa9.92□□□□□ -0.82
NPLOC4-204ENST00000570324 GALTP07902 379 aa9.92□□□□□ -0.82
NPLOC4-204ENST00000570324 PTENP60484 403 aa9.92□□□□□ -0.82
NPLOC4-204ENST00000570324 ORC2Q13416 577 aaPredicted RBP9.92□□□□□ -0.82
NPLOC4-204ENST00000570324 ANKRD54Q6NXT1 300 aa9.92□□□□□ -0.82
NPLOC4-204ENST00000570324 TMEM184AQ6ZMB5 413 aa9.92□□□□□ -0.82
NPLOC4-204ENST00000570324 MRPL10Q7Z7H8 261 aaKnown RBP9.92□□□□□ -0.82
NPLOC4-204ENST00000570324 DDX53Q86TM3 631 aaKnown RBP9.92□□□□□ -0.82
NPLOC4-204ENST00000570324 RNF135Q8IUD6 432 aa9.92□□□□□ -0.82
NPLOC4-204ENST00000570324 CCDC51Q96ER9 411 aa9.92□□□□□ -0.82
NPLOC4-204ENST00000570324 IGSF21Q96ID5 467 aa9.92□□□□□ -0.82
NPLOC4-204ENST00000570324 CPB2Q96IY4 423 aa9.92□□□□□ -0.82
NPLOC4-204ENST00000570324 MTMR9Q96QG7 549 aa9.92□□□□□ -0.82
NPLOC4-204ENST00000570324 NACC1Q96RE7 527 aa9.92□□□□□ -0.82
NPLOC4-204ENST00000570324 APOL6Q9BWW8 343 aa9.92□□□□□ -0.82
NPLOC4-204ENST00000570324 POLR3FQ9H1D9 316 aaPredicted RBP9.92□□□□□ -0.82
NPLOC4-204ENST00000570324 FOXP1Q9H334 677 aaPredicted RBP9.92□□□□□ -0.82
NPLOC4-204ENST00000570324 UPF2Q9HAU5 1272 aaKnown RBP9.92□□□□□ -0.82
NPLOC4-204ENST00000570324 TUFT1Q9NNX1 390 aa9.92□□□□□ -0.82
NPLOC4-204ENST00000570324 STK39Q9UEW8 545 aa9.92□□□□□ -0.82
NPLOC4-204ENST00000570324 MUTYHQ9UIF7 546 aa9.92□□□□□ -0.82
NPLOC4-204ENST00000570324 KIF3AQ9Y496 699 aa9.92□□□□□ -0.82
NPLOC4-204ENST00000570324 A0A087WWV3 80 aa9.91□□□□□ -0.82
NPLOC4-204ENST00000570324 ARHGEF35A5YM69 484 aa9.91□□□□□ -0.82
NPLOC4-204ENST00000570324 C2orf71A6NGG8 1288 aa9.91□□□□□ -0.82
NPLOC4-204ENST00000570324 TSPAN1O60635 241 aa9.91□□□□□ -0.82
NPLOC4-204ENST00000570324 OR52Z1P0C646 297 aa9.91□□□□□ -0.82
NPLOC4-204ENST00000570324 NCLP19338 710 aaKnown RBP9.91□□□□□ -0.82
NPLOC4-204ENST00000570324 HOXA11P31270 313 aaPredicted RBP9.91□□□□□ -0.82
NPLOC4-204ENST00000570324 SLC11A1P49279 550 aa9.91□□□□□ -0.82
NPLOC4-204ENST00000570324 RARRES1P49788 294 aa9.91□□□□□ -0.82
NPLOC4-204ENST00000570324 POU5F1BQ06416 359 aa9.91□□□□□ -0.82
NPLOC4-204ENST00000570324 CAPSQ13938 189 aa9.91□□□□□ -0.82
NPLOC4-204ENST00000570324 CBX2Q14781 532 aaPredicted RBP9.91□□□□□ -0.82
NPLOC4-204ENST00000570324 TTC38Q5R3I4 469 aa9.91□□□□□ -0.82
NPLOC4-204ENST00000570324 HAUS3Q68CZ6 603 aa9.91□□□□□ -0.82
NPLOC4-204ENST00000570324 AGMOQ6ZNB7 445 aa9.91□□□□□ -0.82
NPLOC4-204ENST00000570324 ZBTB33Q86T24 672 aa9.91□□□□□ -0.82
NPLOC4-204ENST00000570324 CATSPER3Q86XQ3 398 aa9.91□□□□□ -0.82
NPLOC4-204ENST00000570324 ZBTB8OSQ8IWT0 167 aa9.91□□□□□ -0.82
NPLOC4-204ENST00000570324 MCPH1Q8NEM0 835 aa9.91□□□□□ -0.82
NPLOC4-204ENST00000570324 FBXO18Q8NFZ0 1043 aa9.91□□□□□ -0.82
NPLOC4-204ENST00000570324 VN1R2Q8NFZ6 395 aa9.91□□□□□ -0.82
NPLOC4-204ENST00000570324 AUTS2Q8WXX7 1259 aa9.91□□□□□ -0.82
NPLOC4-204ENST00000570324 TMEM175Q9BSA9 504 aa9.91□□□□□ -0.82
NPLOC4-204ENST00000570324 EMILIN2Q9BXX0 1053 aa9.91□□□□□ -0.82
NPLOC4-204ENST00000570324 RAB34Q9BZG1 259 aa9.91□□□□□ -0.82
NPLOC4-204ENST00000570324 TMEM60Q9H2L4 133 aa9.91□□□□□ -0.82
NPLOC4-204ENST00000570324 XPNPEP1Q9NQW7 623 aa9.91□□□□□ -0.82
NPLOC4-204ENST00000570324 DNAJB4Q9UDY4 337 aa9.91□□□□□ -0.82
NPLOC4-204ENST00000570324 NR2E1Q9Y466 385 aa9.91□□□□□ -0.82
NPLOC4-204ENST00000570324 IPPQ9Y573 584 aa9.91□□□□□ -0.82
NPLOC4-204ENST00000570324 HCFC2Q9Y5Z7 792 aa9.91□□□□□ -0.82
NPLOC4-204ENST00000570324 LOC730098B7Z3J9 87 aa9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 WNT7AO00755 349 aa9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 ST18O60284 1047 aa9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 CLASP2O75122 1294 aaKnown RBP9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 SSBP05455 408 aaKnown RBP eCLIP9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 CTSAP10619 480 aa9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 GLRA2P23416 452 aa9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 ARL2P36404 184 aa9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 CCT6AP40227 531 aaKnown RBP9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 OR1G1P47890 313 aa9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 TRAPPC10P48553 1259 aa9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 MBTD1Q05BQ5 628 aa9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 ITIH3Q06033 890 aa9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 ST3GAL1Q11201 340 aa9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 HERC4Q5GLZ8 1057 aaPredicted RBP9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 UBXN11Q5T124 520 aa9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 KIAA1841Q6NSI8 718 aa9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 PPFIBP1Q86W92 1011 aa9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 ZNF280BQ86YH2 543 aa9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 NOSTRINQ8IVI9 506 aa9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 ASAP3Q8TDY4 903 aa9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 RIPOR3Q96MK2 946 aa9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 POLR3CQ9BUI4 534 aaPredicted RBP9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 EIF2AQ9BY44 585 aaKnown RBP9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 ZBP1Q9H171 429 aa9.9□□□□□ -0.82
NPLOC4-204ENST00000570324 CSRNP2Q9H175 543 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms