RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 BMP8BP34820 402 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 EPHX2P34913 555 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 MTNR1BP49286 362 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 JAM2P57087 298 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 IRF9Q00978 393 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 LSAMPQ13449 338 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 PUM3Q15397 648 aaKnown RBP3.81□□□□□ -1.8
CNOT1-221ENST00000569924 GPR19Q15760 415 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 INF2Q27J81 1249 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 SLC4A8Q2Y0W8 1093 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 DEFB115Q30KQ5 88 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 CRY2Q49AN0 593 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 PRR16Q569H4 304 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 ANGEL2Q5VTE6 544 aaKnown RBP3.81□□□□□ -1.8
CNOT1-221ENST00000569924 ANKRD34AQ69YU3 496 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 FDX2Q6P4F2 183 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 LVRNQ6Q4G3 990 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 IGF2-ASQ6U949 168 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 CRTC3Q6UUV7 619 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 HHIPL2Q6UWX4 724 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 C1orf229Q6ZS94 237 aaPredicted RBP3.81□□□□□ -1.8
CNOT1-221ENST00000569924 ACAD11Q709F0 780 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 USP45Q70EL2 814 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 DPP9Q86TI2 863 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 PTRH1Q86Y79 214 aaKnown RBP3.81□□□□□ -1.8
CNOT1-221ENST00000569924 DENND1CQ8IV53 801 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 KIAA0319LQ8IZA0 1049 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 GPC2Q8N158 579 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 CLASRPQ8N2M8 674 aaKnown RBP3.81□□□□□ -1.8
CNOT1-221ENST00000569924 PRR18Q8N4B5 295 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 ZNF655Q8N720 491 aaPredicted RBP3.81□□□□□ -1.8
CNOT1-221ENST00000569924 SPATA5Q8NB90 893 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 PPHLN1Q8NEY8 458 aaKnown RBP3.81□□□□□ -1.8
CNOT1-221ENST00000569924 PPP1R35Q8TAP8 253 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 EDARADDQ8WWZ3 215 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 MVB12AQ96EY5 273 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 MPP4Q96JB8 637 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 BTBD6Q96KE9 485 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 PHACTR3Q96KR7 559 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 Q96M66 194 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 CFAP53Q96M91 514 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 KCNJ15Q99712 375 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 WDR12Q9GZL7 423 aaKnown RBP3.81□□□□□ -1.8
CNOT1-221ENST00000569924 MS4A5Q9H3V2 200 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 PCIF1Q9H4Z3 704 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 ZMAT4Q9H898 229 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 SMURF1Q9HCE7 757 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 ACSS2Q9NR19 701 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 L1RE1Q9UN81 338 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 NIP7Q9Y221 180 aaKnown RBP eCLIP3.81□□□□□ -1.8
CNOT1-221ENST00000569924 POLHQ9Y253 713 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 NUDCQ9Y266 331 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 PCDHGB6Q9Y5F9 930 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 RIC1Q4ADV7 1423 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 IBTKQ9P2D0 1353 aaPredicted RBP3.8□□□□□ -1.8
CNOT1-221ENST00000569924 hCG_1642624A0A1W2PR95 340 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 ERVV-1B6SEH8 477 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 RASA4BC9J798 803 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 GOLIM4O00461 696 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 RASA4O43374 803 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 MYO1BO43795 1136 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 KDM1AO60341 852 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 TLR5O60602 858 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 NDUFS2O75306 463 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 UBXN7O94888 489 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 EOMESO95936 686 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 AMY2AP04746 511 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 HSD3B1P14060 373 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 AMY2BP19961 511 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 ENPP1P22413 925 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 CD40P25942 277 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 HOXA10P31260 410 aaPredicted RBP3.8□□□□□ -1.8
CNOT1-221ENST00000569924 KIR3DL1P43629 444 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 KIF11P52732 1056 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 CACNB3P54284 484 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 SRSF2Q01130 221 aaKnown RBP3.8□□□□□ -1.8
CNOT1-221ENST00000569924 MAP2K1Q02750 393 aaPredicted RBP3.8□□□□□ -1.8
CNOT1-221ENST00000569924 TRIM14Q14142 442 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 FSCN1Q16658 493 aaKnown RBP3.8□□□□□ -1.8
CNOT1-221ENST00000569924 TUBB8Q3ZCM7 444 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 DGKKQ5KSL6 1271 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 L1TD1Q5T7N2 865 aaKnown RBP3.8□□□□□ -1.8
CNOT1-221ENST00000569924 LDHAL6AQ6ZMR3 332 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 ARHGAP36Q6ZRI8 547 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 SLC41A1Q8IVJ1 513 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 ZZZ3Q8IYH5 903 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 CNTROBQ8N137 903 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 KRT78Q8N1N4 520 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 SYNE4Q8N205 404 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 CAMKK1Q8N5S9 505 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 GALNT6Q8NCL4 622 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 CCT6BQ92526 530 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 RTF1Q92541 710 aaKnown RBP3.8□□□□□ -1.8
CNOT1-221ENST00000569924 SKA1Q96BD8 255 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 COA7Q96BR5 231 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 CHAMP1Q96JM3 812 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 TBATAQ96M53 351 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 CRB3Q9BUF7 120 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 HDAC8Q9BY41 377 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 NYXQ9GZU5 481 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms