RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 KRT13P13646 458 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 MCM3P25205 808 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 GTF2H1P32780 548 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 EPHX2P34913 555 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 SOX5P35711 763 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 SMTNP53814 917 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 PTK2Q05397 1052 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 PPATQ06203 517 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 IFI16Q16666 785 aaKnown RBP5.86□□□□□ -1.47
SF3B3-213ENST00000569687 GNPTABQ3T906 1256 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 BRDTQ58F21 947 aaPredicted RBP5.86□□□□□ -1.47
SF3B3-213ENST00000569687 XKR9Q5GH70 373 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 TEX35Q5T0J7 233 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 PRAMEF18Q5VWM3 479 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 IQCEQ6IPM2 695 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 CC2D1AQ6P1N0 951 aaPredicted RBP5.86□□□□□ -1.47
SF3B3-213ENST00000569687 USP50Q70EL3 339 aaPredicted RBP5.86□□□□□ -1.47
SF3B3-213ENST00000569687 ZNF571Q7Z3V5 609 aaPredicted RBP5.86□□□□□ -1.47
SF3B3-213ENST00000569687 VPS36Q86VN1 386 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 RIOX2Q8IUF8 465 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 MMGT1Q8N4V1 131 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 XXYLT1Q8NBI6 393 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 TMEM161BQ8NDZ6 487 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 MCPH1Q8NEM0 835 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 RUBCNQ92622 972 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 ATP6V0A1Q93050 837 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 MFSD14AQ96MC6 490 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 ALS2CR12Q96Q35 445 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 SPAG5Q96R06 1193 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 NIFKQ9BYG3 293 aaKnown RBP5.86□□□□□ -1.47
SF3B3-213ENST00000569687 A1CFQ9NQ94 594 aaKnown RBP5.86□□□□□ -1.47
SF3B3-213ENST00000569687 HOMER2Q9NSB8 354 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 HDAC6Q9UBN7 1215 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 ADAMTS1Q9UHI8 967 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 TCEAL9Q9UHQ7 104 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 PUF60Q9UHX1 559 aaKnown RBP5.86□□□□□ -1.47
SF3B3-213ENST00000569687 SALL4Q9UJQ4 1053 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 NAGPAQ9UK23 515 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 TBX20Q9UMR3 447 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 TFR2Q9UP52 801 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 LHX6Q9UPM6 363 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 EXOC7Q9UPT5 735 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 COQ4Q9Y3A0 265 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 SAMM50Q9Y512 469 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 PPME1Q9Y570 386 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 PCDHGC5Q9Y5F6 944 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 SNCAIPQ9Y6H5 919 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 LOC102724159A0A0B4J2E5 919 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 A0A0G2JLL6 359 aaPredicted RBP5.85□□□□□ -1.47
SF3B3-213ENST00000569687 MACROD2A1Z1Q3 448 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 IQCA1LA6NCM1 817 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 UNCXA6NJT0 531 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 PDE2AO00408 941 aaPredicted RBP5.85□□□□□ -1.47
SF3B3-213ENST00000569687 ENC1O14682 589 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 BACH1O14867 736 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 KIAA0391O15091 583 aaKnown RBP5.85□□□□□ -1.47
SF3B3-213ENST00000569687 ATP9BO43861 1147 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 ZNF862O60290 1169 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 ERLIN1O75477 346 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 DGAT1O75907 488 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 MOCS3O95396 460 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 TBC1D8O95759 1140 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 SLC10A3P09131 477 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 H2AFZP0C0S5 128 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 PNMA6AP0CW24 399 aaPredicted RBP5.85□□□□□ -1.47
SF3B3-213ENST00000569687 ERCC3P19447 782 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 GARTP22102 1010 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 EDNRBP24530 442 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 CNGA1P29973 690 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 COPB2P35606 906 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 NPTX2P47972 431 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 VAMP7P51809 220 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 ACTR2P61160 394 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 CLDN10P78369 228 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 APBA1Q02410 837 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 CETN1Q12798 172 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 BFSP1Q12934 665 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 RAPGEF1Q13905 1077 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 KIF22Q14807 665 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 PWP2Q15269 919 aaKnown RBP5.85□□□□□ -1.47
SF3B3-213ENST00000569687 NR6A1Q15406 480 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 STXBP2Q15833 593 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 UGCGQ16739 394 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 KIAA0753Q2KHM9 967 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 EPC2Q52LR7 807 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 GLE1Q53GS7 698 aaKnown RBP5.85□□□□□ -1.47
SF3B3-213ENST00000569687 XKR3Q5GH77 459 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 BEND6Q5SZJ8 279 aaPredicted RBP5.85□□□□□ -1.47
SF3B3-213ENST00000569687 C1orf220Q5T0J3 134 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 MEI1Q5TIA1 1274 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 TCERG1LQ5VWI1 586 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 MIS18BP1Q6P0N0 1132 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 ALKBH5Q6P6C2 394 aaKnown RBP5.85□□□□□ -1.47
SF3B3-213ENST00000569687 H2AFVQ71UI9 128 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 PRRT2Q7Z6L0 340 aaPredicted RBP5.85□□□□□ -1.47
SF3B3-213ENST00000569687 SLFN11Q7Z7L1 901 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 ERO1BQ86YB8 467 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 MAP4K3Q8IVH8 894 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 KSR1Q8IVT5 923 aa5.85□□□□□ -1.47
SF3B3-213ENST00000569687 KRT222Q8N1A0 295 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms