RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 RNF39Q9H2S5 420 aa15.45■□□□□ 0.06
GTF3C1-211ENST00000569653 TTC12Q9H892 705 aaPredicted RBP15.45■□□□□ 0.06
GTF3C1-211ENST00000569653 PUF60Q9UHX1 559 aaKnown RBP15.45■□□□□ 0.06
GTF3C1-211ENST00000569653 HCN4Q9Y3Q4 1203 aa15.45■□□□□ 0.06
GTF3C1-211ENST00000569653 PPME1Q9Y570 386 aa15.45■□□□□ 0.06
GTF3C1-211ENST00000569653 NEMFO60524 1076 aa15.44■□□□□ 0.06
GTF3C1-211ENST00000569653 SPATA31C1P0DKV0 1188 aa15.44■□□□□ 0.06
GTF3C1-211ENST00000569653 ARL2P36404 184 aa15.44■□□□□ 0.06
GTF3C1-211ENST00000569653 TXKP42681 527 aa15.44■□□□□ 0.06
GTF3C1-211ENST00000569653 RARRES1P49788 294 aa15.44■□□□□ 0.06
GTF3C1-211ENST00000569653 RAB27AP51159 221 aa15.44■□□□□ 0.06
GTF3C1-211ENST00000569653 PTENP60484 403 aa15.44■□□□□ 0.06
GTF3C1-211ENST00000569653 SMC1AQ14683 1233 aaKnown RBP15.44■□□□□ 0.06
GTF3C1-211ENST00000569653 GLB1LQ6UWU2 654 aa15.44■□□□□ 0.06
GTF3C1-211ENST00000569653 VPS52Q8N1B4 723 aa15.44■□□□□ 0.06
GTF3C1-211ENST00000569653 C12orf76Q8N812 135 aaPredicted RBP15.44■□□□□ 0.06
GTF3C1-211ENST00000569653 CPB2Q96IY4 423 aa15.44■□□□□ 0.06
GTF3C1-211ENST00000569653 RPGRIP1Q96KN7 1286 aa15.44■□□□□ 0.06
GTF3C1-211ENST00000569653 MTRQ99707 1265 aa15.44■□□□□ 0.06
GTF3C1-211ENST00000569653 INO80BQ9C086 356 aaPredicted RBP15.44■□□□□ 0.06
GTF3C1-211ENST00000569653 GBP3Q9H0R5 595 aa15.44■□□□□ 0.06
GTF3C1-211ENST00000569653 PCDHA12Q9UN75 941 aa15.44■□□□□ 0.06
GTF3C1-211ENST00000569653 ARIH1Q9Y4X5 557 aaPredicted RBP15.44■□□□□ 0.06
GTF3C1-211ENST00000569653 F8W810 466 aa15.43■□□□□ 0.06
GTF3C1-211ENST00000569653 B4GALT5O43286 388 aa15.43■□□□□ 0.06
GTF3C1-211ENST00000569653 MARCH6O60337 910 aa15.43■□□□□ 0.06
GTF3C1-211ENST00000569653 DKC1O60832 514 aaKnown RBP eCLIP15.43■□□□□ 0.06
GTF3C1-211ENST00000569653 WEE2P0C1S8 567 aa15.43■□□□□ 0.06
GTF3C1-211ENST00000569653 EPCAMP16422 314 aa15.43■□□□□ 0.06
GTF3C1-211ENST00000569653 GLRA2P23416 452 aa15.43■□□□□ 0.06
GTF3C1-211ENST00000569653 SP100P23497 879 aaPredicted RBP15.43■□□□□ 0.06
GTF3C1-211ENST00000569653 ALDH7A1P49419 539 aaKnown RBP15.43■□□□□ 0.06
GTF3C1-211ENST00000569653 KRT17Q04695 432 aa15.43■□□□□ 0.06
GTF3C1-211ENST00000569653 MBTD1Q05BQ5 628 aa15.43■□□□□ 0.06
GTF3C1-211ENST00000569653 DDX53Q86TM3 631 aaKnown RBP15.43■□□□□ 0.06
GTF3C1-211ENST00000569653 IFNLR1Q8IU57 520 aaPredicted RBP15.43■□□□□ 0.06
GTF3C1-211ENST00000569653 CCDC83Q8IWF9 413 aa15.43■□□□□ 0.06
GTF3C1-211ENST00000569653 PIGOQ8TEQ8 1089 aa15.43■□□□□ 0.06
GTF3C1-211ENST00000569653 SLC22A17Q8WUG5 538 aa15.43■□□□□ 0.06
GTF3C1-211ENST00000569653 EDAQ92838 391 aa15.43■□□□□ 0.06
GTF3C1-211ENST00000569653 GPRC5CQ9NQ84 441 aa15.43■□□□□ 0.06
GTF3C1-211ENST00000569653 MARCH5Q9NX47 278 aa15.43■□□□□ 0.06
GTF3C1-211ENST00000569653 MIOSQ9NXC5 875 aa15.43■□□□□ 0.06
GTF3C1-211ENST00000569653 HES2Q9Y543 173 aa15.43■□□□□ 0.06
GTF3C1-211ENST00000569653 TRIP11Q15643 1979 aa15.42■□□□□ 0.06
GTF3C1-211ENST00000569653 TTLL13PA6NNM8 815 aa15.42■□□□□ 0.06
GTF3C1-211ENST00000569653 GAS2O43903 313 aaKnown RBP15.42■□□□□ 0.06
GTF3C1-211ENST00000569653 MED24O75448 989 aa15.42■□□□□ 0.06
GTF3C1-211ENST00000569653 BAG4O95429 457 aaKnown RBP15.42■□□□□ 0.06
GTF3C1-211ENST00000569653 CXCL14O95715 111 aa15.42■□□□□ 0.06
GTF3C1-211ENST00000569653 EFEMP2O95967 443 aa15.42■□□□□ 0.06
GTF3C1-211ENST00000569653 POMCP01189 267 aa15.42■□□□□ 0.06
GTF3C1-211ENST00000569653 CTSAP10619 480 aa15.42■□□□□ 0.06
GTF3C1-211ENST00000569653 SKIP12755 728 aa15.42■□□□□ 0.06
GTF3C1-211ENST00000569653 NCLP19338 710 aaKnown RBP15.42■□□□□ 0.06
GTF3C1-211ENST00000569653 ATP2B1P20020 1258 aa15.42■□□□□ 0.06
GTF3C1-211ENST00000569653 HOXD11P31277 338 aaPredicted RBP15.42■□□□□ 0.06
GTF3C1-211ENST00000569653 PTPN14Q15678 1187 aa15.42■□□□□ 0.06
GTF3C1-211ENST00000569653 OTUD6AQ7L8S5 288 aa15.42■□□□□ 0.06
GTF3C1-211ENST00000569653 CDR2LQ86X02 465 aaPredicted RBP15.42■□□□□ 0.06
GTF3C1-211ENST00000569653 TCP11Q8WWU5 503 aa15.42■□□□□ 0.06
GTF3C1-211ENST00000569653 TMEM169Q96HH4 297 aa15.42■□□□□ 0.06
GTF3C1-211ENST00000569653 ZFP42Q96MM3 310 aa15.42■□□□□ 0.06
GTF3C1-211ENST00000569653 POMKQ9H5K3 350 aa15.42■□□□□ 0.06
GTF3C1-211ENST00000569653 RSAD1Q9HA92 442 aa15.42■□□□□ 0.06
GTF3C1-211ENST00000569653 BRMS1Q9HCU9 246 aa15.42■□□□□ 0.06
GTF3C1-211ENST00000569653 ANKEF1Q9NU02 776 aa15.42■□□□□ 0.06
GTF3C1-211ENST00000569653 IPPQ9Y573 584 aa15.42■□□□□ 0.06
GTF3C1-211ENST00000569653 IRAK3Q9Y616 596 aa15.42■□□□□ 0.06
GTF3C1-211ENST00000569653 DOCK6Q96HP0 2047 aa15.41■□□□□ 0.06
GTF3C1-211ENST00000569653 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.41■□□□□ 0.06
GTF3C1-211ENST00000569653 LILRB3O75022 631 aa15.41■□□□□ 0.06
GTF3C1-211ENST00000569653 EDN1P05305 212 aa15.41■□□□□ 0.06
GTF3C1-211ENST00000569653 ARF4P18085 180 aaPredicted RBP15.41■□□□□ 0.06
GTF3C1-211ENST00000569653 MCM7P33993 719 aa15.41■□□□□ 0.06
GTF3C1-211ENST00000569653 ZXDAP98168 799 aa15.41■□□□□ 0.06
GTF3C1-211ENST00000569653 TAS1R1Q7RTX1 841 aa15.41■□□□□ 0.06
GTF3C1-211ENST00000569653 GSTCDQ8NEC7 633 aa15.41■□□□□ 0.06
GTF3C1-211ENST00000569653 BSNDQ8WZ55 320 aa15.41■□□□□ 0.06
GTF3C1-211ENST00000569653 CASP10Q92851 521 aa15.41■□□□□ 0.06
GTF3C1-211ENST00000569653 NXF3Q9H4D5 531 aaKnown RBP15.41■□□□□ 0.06
GTF3C1-211ENST00000569653 FSD2A1L4K1 749 aa15.4■□□□□ 0.06
GTF3C1-211ENST00000569653 INPPL1O15357 1258 aa15.4■□□□□ 0.06
GTF3C1-211ENST00000569653 ASAP2O43150 1006 aa15.4■□□□□ 0.06
GTF3C1-211ENST00000569653 USO1O60763 962 aaKnown RBP15.4■□□□□ 0.06
GTF3C1-211ENST00000569653 DGAT1O75907 488 aa15.4■□□□□ 0.06
GTF3C1-211ENST00000569653 HOXB8P17481 243 aaPredicted RBP15.4■□□□□ 0.06
GTF3C1-211ENST00000569653 RNASELQ05823 741 aaKnown RBP15.4■□□□□ 0.06
GTF3C1-211ENST00000569653 DSC1Q08554 894 aa15.4■□□□□ 0.06
GTF3C1-211ENST00000569653 NBR1Q14596 966 aa15.4■□□□□ 0.06
GTF3C1-211ENST00000569653 C8orf34Q49A92 452 aa15.4■□□□□ 0.06
GTF3C1-211ENST00000569653 POTEGQ6S5H5 508 aa15.4■□□□□ 0.06
GTF3C1-211ENST00000569653 TRIM67Q6ZTA4 783 aa15.4■□□□□ 0.06
GTF3C1-211ENST00000569653 CATSPER3Q86XQ3 398 aa15.4■□□□□ 0.06
GTF3C1-211ENST00000569653 COLGALT2Q8IYK4 626 aa15.4■□□□□ 0.06
GTF3C1-211ENST00000569653 RNF168Q8IYW5 571 aaPredicted RBP15.4■□□□□ 0.06
GTF3C1-211ENST00000569653 PGBD4Q96DM1 585 aa15.4■□□□□ 0.06
GTF3C1-211ENST00000569653 ASIC4Q96FT7 647 aa15.4■□□□□ 0.06
GTF3C1-211ENST00000569653 GAD1Q99259 594 aa15.4■□□□□ 0.06
GTF3C1-211ENST00000569653 POLR3FQ9H1D9 316 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms