RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 REPS2Q8NFH8 660 aa6.22□□□□□ -1.41
CDH13-213ENST00000569454 IL31RAQ8NI17 732 aa6.22□□□□□ -1.41
CDH13-213ENST00000569454 FAM71BQ8TC56 605 aa6.22□□□□□ -1.41
CDH13-213ENST00000569454 TMC2Q8TDI7 906 aa6.22□□□□□ -1.41
CDH13-213ENST00000569454 CTNNBL1Q8WYA6 563 aaPredicted RBP6.22□□□□□ -1.41
CDH13-213ENST00000569454 RFFLQ8WZ73 363 aa6.22□□□□□ -1.41
CDH13-213ENST00000569454 ATG4CQ96DT6 458 aa6.22□□□□□ -1.41
CDH13-213ENST00000569454 PNKPQ96T60 521 aa6.22□□□□□ -1.41
CDH13-213ENST00000569454 MMS19Q96T76 1030 aa6.22□□□□□ -1.41
CDH13-213ENST00000569454 RHOXF2Q9BQY4 288 aa6.22□□□□□ -1.41
CDH13-213ENST00000569454 SELENOOQ9BVL4 669 aa6.22□□□□□ -1.41
CDH13-213ENST00000569454 TLR10Q9BXR5 811 aa6.22□□□□□ -1.41
CDH13-213ENST00000569454 MOV10L1Q9BXT6 1211 aaKnown RBP6.22□□□□□ -1.41
CDH13-213ENST00000569454 INTS2Q9H0H0 1204 aaKnown RBP6.22□□□□□ -1.41
CDH13-213ENST00000569454 MLXIPQ9HAP2 919 aa6.22□□□□□ -1.41
CDH13-213ENST00000569454 KIAA1586Q9HCI6 787 aa6.22□□□□□ -1.41
CDH13-213ENST00000569454 SIX2Q9NPC8 291 aa6.22□□□□□ -1.41
CDH13-213ENST00000569454 HOMER2Q9NSB8 354 aa6.22□□□□□ -1.41
CDH13-213ENST00000569454 GPRC5DQ9NZD1 345 aa6.22□□□□□ -1.41
CDH13-213ENST00000569454 WRAP73Q9P2S5 460 aaPredicted RBP6.22□□□□□ -1.41
CDH13-213ENST00000569454 ADAMTS1Q9UHI8 967 aa6.22□□□□□ -1.41
CDH13-213ENST00000569454 NAGPAQ9UK23 515 aa6.22□□□□□ -1.41
CDH13-213ENST00000569454 ZNF214Q9UL59 606 aaPredicted RBP6.22□□□□□ -1.41
CDH13-213ENST00000569454 NENFQ9UMX5 172 aa6.22□□□□□ -1.41
CDH13-213ENST00000569454 GJA3Q9Y6H8 435 aa6.22□□□□□ -1.41
CDH13-213ENST00000569454 SSC5DA1L4H1 1573 aa6.22□□□□□ -1.41
CDH13-213ENST00000569454 NCANO14594 1321 aa6.22□□□□□ -1.41
CDH13-213ENST00000569454 IGSF9BQ9UPX0 1349 aa6.22□□□□□ -1.41
CDH13-213ENST00000569454 LOC102724159A0A0B4J2E5 919 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 CCDC188H7C350 402 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 DDX39AO00148 427 aaKnown RBP6.21□□□□□ -1.42
CDH13-213ENST00000569454 CLIC2O15247 247 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 EVI5O60447 810 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 ZC3H11AO75152 810 aaKnown RBP eCLIP6.21□□□□□ -1.42
CDH13-213ENST00000569454 PALMO75781 387 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 SEC31AO94979 1220 aaKnown RBP6.21□□□□□ -1.42
CDH13-213ENST00000569454 TMEM253P0C7T8 217 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 MYCLP12524 364 aaPredicted RBP6.21□□□□□ -1.42
CDH13-213ENST00000569454 ERCC3P19447 782 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 GARTP22102 1010 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 OAS2P29728 719 aaKnown RBP6.21□□□□□ -1.42
CDH13-213ENST00000569454 ICAM3P32942 547 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 PLA2G4AP47712 749 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 AARSP49588 968 aaKnown RBP eCLIP6.21□□□□□ -1.42
CDH13-213ENST00000569454 MXI1P50539 228 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 VAMP7P51809 220 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 EPHB4P54760 987 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 HADHBP55084 474 aaKnown RBP6.21□□□□□ -1.42
CDH13-213ENST00000569454 APBA1Q02410 837 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 ARID5AQ03989 594 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 BAATQ14032 418 aaPredicted RBP6.21□□□□□ -1.42
CDH13-213ENST00000569454 CASP8Q14790 479 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 KIF22Q14807 665 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 TCEAL1Q15170 157 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 PWP2Q15269 919 aaKnown RBP6.21□□□□□ -1.42
CDH13-213ENST00000569454 RPS6KA1Q15418 735 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 TERF2Q15554 542 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 ZC2HC1CQ53FD0 456 aaPredicted RBP6.21□□□□□ -1.42
CDH13-213ENST00000569454 BRDTQ58F21 947 aaPredicted RBP6.21□□□□□ -1.42
CDH13-213ENST00000569454 XKR9Q5GH70 373 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 XKR3Q5GH77 459 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 NBPF12Q5TAG4 269 aaPredicted RBP6.21□□□□□ -1.42
CDH13-213ENST00000569454 ANGEL2Q5VTE6 544 aaKnown RBP6.21□□□□□ -1.42
CDH13-213ENST00000569454 PPP1R2P3Q6NXS1 205 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 MIS18BP1Q6P0N0 1132 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 CATSPERGQ6ZRH7 1159 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 ZNF571Q7Z3V5 609 aaPredicted RBP6.21□□□□□ -1.42
CDH13-213ENST00000569454 EXOC8Q8IYI6 725 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 MORC4Q8TE76 937 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 COG1Q8WTW3 980 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 DHX38Q92620 1227 aaKnown RBP6.21□□□□□ -1.42
CDH13-213ENST00000569454 CAPZA3Q96KX2 299 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 IFT74Q96LB3 600 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 TAAR1Q96RJ0 339 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 UIMC1Q96RL1 719 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 NAP1L3Q99457 506 aaPredicted RBP6.21□□□□□ -1.42
CDH13-213ENST00000569454 NTPCRQ9BSD7 190 aaKnown RBP6.21□□□□□ -1.42
CDH13-213ENST00000569454 ATP6V0A4Q9HBG4 840 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 JPH1Q9HDC5 661 aaPredicted RBP6.21□□□□□ -1.42
CDH13-213ENST00000569454 WBP1LQ9NX94 342 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 PSD3Q9NYI0 1048 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 GGA3Q9NZ52 723 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 HSPBP1Q9NZL4 362 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 STIM2Q9P246 746 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.21□□□□□ -1.42
CDH13-213ENST00000569454 SUCLA2Q9P2R7 463 aaPredicted RBP6.21□□□□□ -1.42
CDH13-213ENST00000569454 HDAC6Q9UBN7 1215 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 SLC9A2Q9UBY0 812 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 DNAJC12Q9UKB3 198 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 DUSP10Q9Y6W6 482 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 A0A0G2JMZ2 1700 aa6.21□□□□□ -1.42
CDH13-213ENST00000569454 ZFHX4Q86UP3 3567 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 CCDC66A2RUB6 948 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 ANKRD62A6NC57 917 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 SFI1A8K8P3 1242 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 MIF4GDA9UHW6 222 aaKnown RBP6.2□□□□□ -1.42
CDH13-213ENST00000569454 SPATA31C2B4DYI2 1134 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 PGRMC1O00264 195 aaKnown RBP6.2□□□□□ -1.42
CDH13-213ENST00000569454 BACH1O14867 736 aa6.2□□□□□ -1.42
CDH13-213ENST00000569454 GAS2O43903 313 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms