RNA–Protein interactions for RNA: ENST00000569446.2

SCRT1-201, Transcript of scratch family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRT1, Length 3,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1-201ENST00000569446 ECEL1O95672 775 aa21.94■■□□□ 1.1
SCRT1-201ENST00000569446 NSFP46459 744 aaKnown RBP21.94■■□□□ 1.1
SCRT1-201ENST00000569446 LNX1Q8TBB1 728 aaPredicted RBP21.94■■□□□ 1.1
SCRT1-201ENST00000569446 KCNMB3Q9NPA1 279 aa21.94■■□□□ 1.1
SCRT1-201ENST00000569446 TJP1Q07157 1748 aa21.94■■□□□ 1.1
SCRT1-201ENST00000569446 N4BP2Q86UW6 1770 aaPredicted RBP21.94■■□□□ 1.1
SCRT1-201ENST00000569446 GAKO14976 1311 aa21.94■■□□□ 1.1
SCRT1-201ENST00000569446 IGSF9BQ9UPX0 1349 aa21.94■■□□□ 1.1
SCRT1-201ENST00000569446 IFT74Q96LB3 600 aa21.94■■□□□ 1.1
SCRT1-201ENST00000569446 IMPG2Q9BZV3 1241 aa21.94■■□□□ 1.1
SCRT1-201ENST00000569446 SIPA1L3O60292 1781 aaPredicted RBP21.94■■□□□ 1.1
SCRT1-201ENST00000569446 PITPNM2Q9BZ72 1349 aa21.94■■□□□ 1.1
SCRT1-201ENST00000569446 CICQ96RK0 1608 aaPredicted RBP21.94■■□□□ 1.1
SCRT1-201ENST00000569446 PJA2O43164 708 aa21.94■■□□□ 1.1
SCRT1-201ENST00000569446 MFAP3P55082 362 aa21.94■■□□□ 1.1
SCRT1-201ENST00000569446 JAG1P78504 1218 aa21.94■■□□□ 1.1
SCRT1-201ENST00000569446 SPP2Q13103 211 aa21.94■■□□□ 1.1
SCRT1-201ENST00000569446 ZCWPW2Q504Y3 356 aa21.94■■□□□ 1.1
SCRT1-201ENST00000569446 KIAA1755Q5JYT7 1200 aa21.94■■□□□ 1.1
SCRT1-201ENST00000569446 MMS22LQ6ZRQ5 1243 aa21.94■■□□□ 1.1
SCRT1-201ENST00000569446 PWWP2AQ96N64 755 aa21.94■■□□□ 1.1
SCRT1-201ENST00000569446 AGTPBP1Q9UPW5 1226 aa21.94■■□□□ 1.1
SCRT1-201ENST00000569446 PCDHB4Q9Y5E5 795 aa21.94■■□□□ 1.1
SCRT1-201ENST00000569446 TGFB1I1O43294 461 aa21.93■■□□□ 1.1
SCRT1-201ENST00000569446 PIAS1O75925 651 aa21.93■■□□□ 1.1
SCRT1-201ENST00000569446 MARK3P27448 753 aa21.93■■□□□ 1.1
SCRT1-201ENST00000569446 SREBF1P36956 1147 aa21.93■■□□□ 1.1
SCRT1-201ENST00000569446 IFI35P80217 286 aaPredicted RBP21.93■■□□□ 1.1
SCRT1-201ENST00000569446 ZNF844Q08AG5 666 aa21.93■■□□□ 1.1
SCRT1-201ENST00000569446 ZNF720Q7Z2F6 126 aa21.93■■□□□ 1.1
SCRT1-201ENST00000569446 PRUNE1Q86TP1 453 aa21.93■■□□□ 1.1
SCRT1-201ENST00000569446 PARP4Q9UKK3 1724 aaKnown RBP21.93■■□□□ 1.1
SCRT1-201ENST00000569446 PCDHGC5Q9Y5F6 944 aa21.93■■□□□ 1.1
SCRT1-201ENST00000569446 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.93■■□□□ 1.1
SCRT1-201ENST00000569446 NUP98P52948 1817 aa21.93■■□□□ 1.1
SCRT1-201ENST00000569446 SWSAP1Q6NVH7 229 aa21.93■■□□□ 1.1
SCRT1-201ENST00000569446 KIRREL3Q8IZU9 778 aa21.93■■□□□ 1.1
SCRT1-201ENST00000569446 CCDC197Q8NCU1 140 aa21.93■■□□□ 1.1
SCRT1-201ENST00000569446 FAM163AQ96GL9 167 aaPredicted RBP21.93■■□□□ 1.1
SCRT1-201ENST00000569446 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.93■■□□□ 1.1
SCRT1-201ENST00000569446 GJB6O95452 261 aa21.93■■□□□ 1.1
SCRT1-201ENST00000569446 TMED2Q15363 201 aa21.93■■□□□ 1.1
SCRT1-201ENST00000569446 PHLDB3Q6NSJ2 640 aa21.93■■□□□ 1.1
SCRT1-201ENST00000569446 CCDC13Q8IYE1 715 aa21.93■■□□□ 1.1
SCRT1-201ENST00000569446 GABBR1Q9UBS5 961 aa21.93■■□□□ 1.1
SCRT1-201ENST00000569446 PASKQ96RG2 1323 aa21.92■■□□□ 1.1
SCRT1-201ENST00000569446 SNED1Q8TER0 1413 aa21.92■■□□□ 1.1
SCRT1-201ENST00000569446 GAS8O95995 478 aa21.92■■□□□ 1.1
SCRT1-201ENST00000569446 HNRNPH1P31943 449 aaKnown RBP21.92■■□□□ 1.1
SCRT1-201ENST00000569446 KYNUQ16719 465 aa21.92■■□□□ 1.1
SCRT1-201ENST00000569446 NT5DC3Q86UY8 548 aa21.92■■□□□ 1.1
SCRT1-201ENST00000569446 CDR2LQ86X02 465 aaPredicted RBP21.92■■□□□ 1.1
SCRT1-201ENST00000569446 SUPT20HQ8NEM7 779 aa21.92■■□□□ 1.1
SCRT1-201ENST00000569446 NSRP1Q9H0G5 558 aaKnown RBP21.92■■□□□ 1.1
SCRT1-201ENST00000569446 CEP83Q9Y592 693 aa21.92■■□□□ 1.1
SCRT1-201ENST00000569446 UTRNP46939 3433 aa21.92■■□□□ 1.1
SCRT1-201ENST00000569446 ADRA2BP18089 450 aa21.92■■□□□ 1.1
SCRT1-201ENST00000569446 PIK3CAP42336 1068 aa21.92■■□□□ 1.1
SCRT1-201ENST00000569446 STRN3Q13033 797 aa21.92■■□□□ 1.1
SCRT1-201ENST00000569446 SEMA3FQ13275 785 aa21.92■■□□□ 1.1
SCRT1-201ENST00000569446 RNF207Q6ZRF8 634 aa21.92■■□□□ 1.1
SCRT1-201ENST00000569446 INTS8Q75QN2 995 aaKnown RBP21.92■■□□□ 1.1
SCRT1-201ENST00000569446 OTOP1Q7RTM1 612 aa21.92■■□□□ 1.1
SCRT1-201ENST00000569446 USP37Q86T82 979 aa21.92■■□□□ 1.1
SCRT1-201ENST00000569446 ALG3Q92685 438 aa21.92■■□□□ 1.1
SCRT1-201ENST00000569446 ERVK-5Q9HDB9 667 aa21.92■■□□□ 1.1
SCRT1-201ENST00000569446 YWHABP31946 246 aaKnown RBP21.92■■□□□ 1.1
SCRT1-201ENST00000569446 QARSP47897 775 aaKnown RBP21.92■■□□□ 1.1
SCRT1-201ENST00000569446 IRX3P78415 501 aaPredicted RBP21.92■■□□□ 1.1
SCRT1-201ENST00000569446 TMEM270Q6UE05 265 aa21.92■■□□□ 1.1
SCRT1-201ENST00000569446 ETNPPLQ8TBG4 499 aa21.92■■□□□ 1.1
SCRT1-201ENST00000569446 RAPGEF5Q92565 580 aa21.92■■□□□ 1.1
SCRT1-201ENST00000569446 SYN2Q92777 582 aaPredicted RBP21.92■■□□□ 1.1
SCRT1-201ENST00000569446 TULP2O00295 520 aa21.91■■□□□ 1.1
SCRT1-201ENST00000569446 ATF2P15336 505 aa21.91■■□□□ 1.1
SCRT1-201ENST00000569446 MAP2K2P36507 400 aa21.91■■□□□ 1.1
SCRT1-201ENST00000569446 SH3BP5LQ7L8J4 393 aa21.91■■□□□ 1.1
SCRT1-201ENST00000569446 VSIG1Q86XK7 387 aa21.91■■□□□ 1.1
SCRT1-201ENST00000569446 CCDC77Q9BR77 488 aa21.91■■□□□ 1.1
SCRT1-201ENST00000569446 EZRP15311 586 aaKnown RBP21.91■■□□□ 1.1
SCRT1-201ENST00000569446 PPP3CAQ08209 521 aa21.91■■□□□ 1.1
SCRT1-201ENST00000569446 CNKSR1Q969H4 720 aa21.91■■□□□ 1.1
SCRT1-201ENST00000569446 ERP44Q9BS26 406 aa21.91■■□□□ 1.1
SCRT1-201ENST00000569446 SPAG7O75391 227 aa21.91■■□□□ 1.1
SCRT1-201ENST00000569446 POLGP54098 1239 aaPredicted RBP21.91■■□□□ 1.1
SCRT1-201ENST00000569446 STRIP1Q5VSL9 837 aa21.91■■□□□ 1.1
SCRT1-201ENST00000569446 GDF3Q9NR23 364 aa21.91■■□□□ 1.1
SCRT1-201ENST00000569446 NXF1Q9UBU9 619 aaKnown RBP21.91■■□□□ 1.1
SCRT1-201ENST00000569446 DISP2A7MBM2 1401 aa21.91■■□□□ 1.1
SCRT1-201ENST00000569446 RWDD2BP57060 319 aa21.9■■□□□ 1.1
SCRT1-201ENST00000569446 KIF2BQ8N4N8 673 aa21.9■■□□□ 1.1
SCRT1-201ENST00000569446 IL31RAQ8NI17 732 aa21.9■■□□□ 1.1
SCRT1-201ENST00000569446 TAAR1Q96RJ0 339 aa21.9■■□□□ 1.1
SCRT1-201ENST00000569446 EXOC7Q9UPT5 735 aa21.9■■□□□ 1.1
SCRT1-201ENST00000569446 ZHX2Q9Y6X8 837 aa21.9■■□□□ 1.1
SCRT1-201ENST00000569446 EDIL3O43854 480 aa21.9■■□□□ 1.1
SCRT1-201ENST00000569446 TTLL12Q14166 644 aaPredicted RBP21.9■■□□□ 1.1
SCRT1-201ENST00000569446 SPOPLQ6IQ16 392 aa21.9■■□□□ 1.1
SCRT1-201ENST00000569446 IQCKQ8N0W5 287 aa21.9■■□□□ 1.1
SCRT1-201ENST00000569446 TMEM143Q96AN5 459 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms