RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 ADCY7P51828 1080 aa9.78□□□□□ -0.84
SMG1-216ENST00000569122 NAPAP54920 295 aa9.78□□□□□ -0.84
SMG1-216ENST00000569122 ACAP1Q15027 740 aa9.78□□□□□ -0.84
SMG1-216ENST00000569122 ZNF852Q6ZMS4 543 aa9.78□□□□□ -0.84
SMG1-216ENST00000569122 SYNE3Q6ZMZ3 975 aa9.78□□□□□ -0.84
SMG1-216ENST00000569122 MAMSTRQ6ZN01 415 aa9.78□□□□□ -0.84
SMG1-216ENST00000569122 TRMT1LQ7Z2T5 733 aaKnown RBP9.78□□□□□ -0.84
SMG1-216ENST00000569122 ZNF410Q86VK4 478 aa9.78□□□□□ -0.84
SMG1-216ENST00000569122 LRRC71Q8N4P6 559 aa9.78□□□□□ -0.84
SMG1-216ENST00000569122 CNNM3Q8NE01 707 aa9.78□□□□□ -0.84
SMG1-216ENST00000569122 CLDN23Q96B33 292 aa9.78□□□□□ -0.84
SMG1-216ENST00000569122 TMEM87BQ96K49 555 aa9.78□□□□□ -0.84
SMG1-216ENST00000569122 JPH2Q9BR39 696 aaPredicted RBP9.78□□□□□ -0.84
SMG1-216ENST00000569122 MYL10Q9BUA6 226 aa9.78□□□□□ -0.84
SMG1-216ENST00000569122 HERC2P3Q9BVR0 1158 aa9.78□□□□□ -0.84
SMG1-216ENST00000569122 ANO3Q9BYT9 981 aa9.78□□□□□ -0.84
SMG1-216ENST00000569122 SENP2Q9HC62 589 aa9.78□□□□□ -0.84
SMG1-216ENST00000569122 LTB4R2Q9NPC1 389 aa9.78□□□□□ -0.84
SMG1-216ENST00000569122 GABBR1Q9UBS5 961 aa9.78□□□□□ -0.84
SMG1-216ENST00000569122 DNAJB4Q9UDY4 337 aa9.78□□□□□ -0.84
SMG1-216ENST00000569122 CDH7Q9ULB5 785 aa9.78□□□□□ -0.84
SMG1-216ENST00000569122 PIN4Q9Y237 131 aaKnown RBP9.78□□□□□ -0.84
SMG1-216ENST00000569122 MYH6P13533 1939 aa9.78□□□□□ -0.84
SMG1-216ENST00000569122 SPTBN2O15020 2390 aa9.78□□□□□ -0.84
SMG1-216ENST00000569122 CHD6Q8TD26 2715 aa9.77□□□□□ -0.84
SMG1-216ENST00000569122 NRP1O14786 923 aa9.77□□□□□ -0.85
SMG1-216ENST00000569122 DHX15O43143 795 aaKnown RBP9.77□□□□□ -0.85
SMG1-216ENST00000569122 RFPL2O75678 378 aa9.77□□□□□ -0.85
SMG1-216ENST00000569122 PLEKHA8P1O95397 391 aa9.77□□□□□ -0.85
SMG1-216ENST00000569122 OATP04181 439 aa9.77□□□□□ -0.85
SMG1-216ENST00000569122 HNRNPA1P09651 372 aaKnown RBP eCLIP9.77□□□□□ -0.85
SMG1-216ENST00000569122 SHC2P98077 582 aa9.77□□□□□ -0.85
SMG1-216ENST00000569122 DSG1Q02413 1049 aa9.77□□□□□ -0.85
SMG1-216ENST00000569122 AAMPQ13685 434 aa9.77□□□□□ -0.85
SMG1-216ENST00000569122 COL9A3Q14050 684 aaPredicted RBP9.77□□□□□ -0.85
SMG1-216ENST00000569122 COL9A2Q14055 689 aaPredicted RBP9.77□□□□□ -0.85
SMG1-216ENST00000569122 IL31Q6EBC2 164 aa9.77□□□□□ -0.85
SMG1-216ENST00000569122 CATSPER4Q7RTX7 472 aa9.77□□□□□ -0.85
SMG1-216ENST00000569122 BCL7CQ8WUZ0 217 aaPredicted RBP9.77□□□□□ -0.85
SMG1-216ENST00000569122 LPPQ93052 612 aa9.77□□□□□ -0.85
SMG1-216ENST00000569122 ZNF707Q96C28 371 aaPredicted RBP9.77□□□□□ -0.85
SMG1-216ENST00000569122 VN1R3Q9BXE9 311 aa9.77□□□□□ -0.85
SMG1-216ENST00000569122 RSAD1Q9HA92 442 aa9.77□□□□□ -0.85
SMG1-216ENST00000569122 FNIP2Q9P278 1114 aa9.77□□□□□ -0.85
SMG1-216ENST00000569122 SLC12A7Q9Y666 1083 aa9.77□□□□□ -0.85
SMG1-216ENST00000569122 ATRXP46100 2492 aa9.77□□□□□ -0.85
SMG1-216ENST00000569122 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.76□□□□□ -0.85
SMG1-216ENST00000569122 SMCO2A6NFE2 343 aa9.76□□□□□ -0.85
SMG1-216ENST00000569122 MAN2B1O00754 1011 aa9.76□□□□□ -0.85
SMG1-216ENST00000569122 XYLBO75191 536 aa9.76□□□□□ -0.85
SMG1-216ENST00000569122 LRRN2O75325 713 aa9.76□□□□□ -0.85
SMG1-216ENST00000569122 CYP3A4P08684 503 aa9.76□□□□□ -0.85
SMG1-216ENST00000569122 FGFR4P22455 802 aa9.76□□□□□ -0.85
SMG1-216ENST00000569122 SFNP31947 248 aa9.76□□□□□ -0.85
SMG1-216ENST00000569122 MCM5P33992 734 aa9.76□□□□□ -0.85
SMG1-216ENST00000569122 CNR2P34972 360 aa9.76□□□□□ -0.85
SMG1-216ENST00000569122 LIFRP42702 1097 aa9.76□□□□□ -0.85
SMG1-216ENST00000569122 ADCY1Q08828 1119 aa9.76□□□□□ -0.85
SMG1-216ENST00000569122 SPEM2Q0P670 501 aa9.76□□□□□ -0.85
SMG1-216ENST00000569122 CSRP2Q16527 193 aa9.76□□□□□ -0.85
SMG1-216ENST00000569122 ZNF280BQ86YH2 543 aa9.76□□□□□ -0.85
SMG1-216ENST00000569122 PLEKHM2Q8IWE5 1019 aa9.76□□□□□ -0.85
SMG1-216ENST00000569122 EXOC8Q8IYI6 725 aa9.76□□□□□ -0.85
SMG1-216ENST00000569122 FANCBQ8NB91 859 aa9.76□□□□□ -0.85
SMG1-216ENST00000569122 COLEC11Q9BWP8 271 aa9.76□□□□□ -0.85
SMG1-216ENST00000569122 PRMT8Q9NR22 394 aaPredicted RBP9.76□□□□□ -0.85
SMG1-216ENST00000569122 PCDHB2Q9Y5E7 798 aa9.76□□□□□ -0.85
SMG1-216ENST00000569122 FAM86B1E9PN63 330 aa9.75□□□□□ -0.85
SMG1-216ENST00000569122 TGM5O43548 720 aa9.75□□□□□ -0.85
SMG1-216ENST00000569122 ZMYND10O75800 440 aa9.75□□□□□ -0.85
SMG1-216ENST00000569122 FAM86B2P0C5J1 330 aa9.75□□□□□ -0.85
SMG1-216ENST00000569122 OR1G1P47890 313 aa9.75□□□□□ -0.85
SMG1-216ENST00000569122 CCR3P51677 355 aa9.75□□□□□ -0.85
SMG1-216ENST00000569122 NCBP1Q09161 790 aaKnown RBP9.75□□□□□ -0.85
SMG1-216ENST00000569122 USP41Q3LFD5 358 aa9.75□□□□□ -0.85
SMG1-216ENST00000569122 LONRF3Q496Y0 759 aa9.75□□□□□ -0.85
SMG1-216ENST00000569122 LIN9Q5TKA1 542 aa9.75□□□□□ -0.85
SMG1-216ENST00000569122 PARM1Q6UWI2 310 aa9.75□□□□□ -0.85
SMG1-216ENST00000569122 TMTC3Q6ZXV5 915 aa9.75□□□□□ -0.85
SMG1-216ENST00000569122 RTL10Q7L3V2 364 aa9.75□□□□□ -0.85
SMG1-216ENST00000569122 MRPL10Q7Z7H8 261 aaKnown RBP9.75□□□□□ -0.85
SMG1-216ENST00000569122 CHD1LQ86WJ1 897 aa9.75□□□□□ -0.85
SMG1-216ENST00000569122 PALB2Q86YC2 1186 aa9.75□□□□□ -0.85
SMG1-216ENST00000569122 MB21D2Q8IYB1 491 aaPredicted RBP9.75□□□□□ -0.85
SMG1-216ENST00000569122 CCDC82Q8N4S0 544 aa9.75□□□□□ -0.85
SMG1-216ENST00000569122 FEZF2Q8TBJ5 459 aa9.75□□□□□ -0.85
SMG1-216ENST00000569122 FGF14Q92915 247 aa9.75□□□□□ -0.85
SMG1-216ENST00000569122 ZNF668Q96K58 619 aaPredicted RBP9.75□□□□□ -0.85
SMG1-216ENST00000569122 PHF20Q9BVI0 1012 aa9.75□□□□□ -0.85
SMG1-216ENST00000569122 RWDD1Q9H446 243 aaPredicted RBP9.75□□□□□ -0.85
SMG1-216ENST00000569122 PARD6AQ9NPB6 346 aa9.75□□□□□ -0.85
SMG1-216ENST00000569122 DISC1Q9NRI5 854 aa9.75□□□□□ -0.85
SMG1-216ENST00000569122 CHST7Q9NS84 486 aa9.75□□□□□ -0.85
SMG1-216ENST00000569122 SEMA4GQ9NTN9 838 aa9.75□□□□□ -0.85
SMG1-216ENST00000569122 FAM217BQ9NTX9 383 aaPredicted RBP9.75□□□□□ -0.85
SMG1-216ENST00000569122 RBM28Q9NW13 759 aaKnown RBP9.75□□□□□ -0.85
SMG1-216ENST00000569122 A0A087WZ62 844 aa9.74□□□□□ -0.85
SMG1-216ENST00000569122 PRC1O43663 620 aa9.74□□□□□ -0.85
SMG1-216ENST00000569122 CSDE1O75534 798 aaKnown RBP9.74□□□□□ -0.85
SMG1-216ENST00000569122 DDHD2O94830 711 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms