RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 GJB2P29033 226 aa8.69□□□□□ -1.02
CDH3-209ENST00000569080 NRIP1P48552 1158 aa8.69□□□□□ -1.02
CDH3-209ENST00000569080 BCAR1P56945 870 aa8.69□□□□□ -1.02
CDH3-209ENST00000569080 COASYQ13057 564 aa8.69□□□□□ -1.02
CDH3-209ENST00000569080 PTGDRQ13258 359 aa8.69□□□□□ -1.02
CDH3-209ENST00000569080 SMAD4Q13485 552 aaKnown RBP8.69□□□□□ -1.02
CDH3-209ENST00000569080 SMAD2Q15796 467 aaKnown RBP8.69□□□□□ -1.02
CDH3-209ENST00000569080 CLUL1Q15846 466 aa8.69□□□□□ -1.02
CDH3-209ENST00000569080 NOMO2Q5JPE7 1267 aa8.69□□□□□ -1.02
CDH3-209ENST00000569080 PLPP4Q5VZY2 271 aa8.69□□□□□ -1.02
CDH3-209ENST00000569080 HAUS3Q68CZ6 603 aa8.69□□□□□ -1.02
CDH3-209ENST00000569080 PDE12Q6L8Q7 609 aaKnown RBP8.69□□□□□ -1.02
CDH3-209ENST00000569080 GLB1LQ6UWU2 654 aa8.69□□□□□ -1.02
CDH3-209ENST00000569080 PPP4R3CPQ6ZMV5 832 aa8.69□□□□□ -1.02
CDH3-209ENST00000569080 MCPH1Q8NEM0 835 aa8.69□□□□□ -1.02
CDH3-209ENST00000569080 CCDC51Q96ER9 411 aa8.69□□□□□ -1.02
CDH3-209ENST00000569080 TCF25Q9BQ70 676 aa8.69□□□□□ -1.02
CDH3-209ENST00000569080 MMTAG2Q9BU76 263 aaKnown RBP8.69□□□□□ -1.02
CDH3-209ENST00000569080 ZBP1Q9H171 429 aa8.69□□□□□ -1.02
CDH3-209ENST00000569080 C11orf16Q9NQ32 467 aa8.69□□□□□ -1.02
CDH3-209ENST00000569080 SPG21Q9NZD8 308 aa8.69□□□□□ -1.02
CDH3-209ENST00000569080 DNAJB4Q9UDY4 337 aa8.69□□□□□ -1.02
CDH3-209ENST00000569080 BARX2Q9UMQ3 279 aaPredicted RBP8.69□□□□□ -1.02
CDH3-209ENST00000569080 NOL7Q9UMY1 257 aaKnown RBP8.69□□□□□ -1.02
CDH3-209ENST00000569080 IPPQ9Y573 584 aa8.69□□□□□ -1.02
CDH3-209ENST00000569080 TDRD15B5MCY1 1934 aaKnown RBP8.69□□□□□ -1.02
CDH3-209ENST00000569080 CNTNAP2Q9UHC6 1331 aa8.69□□□□□ -1.02
CDH3-209ENST00000569080 WDFY4Q6ZS81 3184 aa8.69□□□□□ -1.02
CDH3-209ENST00000569080 DENND4AQ7Z401 1863 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 TTLL13PA6NNM8 815 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 NT5C1B-RDH14C9J2C7 533 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 INO80B-WBP1J3KQ70 363 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 ZC3H11AO75152 810 aaKnown RBP eCLIP8.68□□□□□ -1.02
CDH3-209ENST00000569080 DDHD2O94830 711 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 ERLIN2O94905 339 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 EFEMP2O95967 443 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 GALTP07902 379 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 CYP11B2P19099 503 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 AXLP30530 894 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 PRPHP41219 470 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 SLC11A1P49279 550 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 MCM2P49736 904 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 NDUFV1P49821 464 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 ATP2C1P98194 919 aaPredicted RBP8.68□□□□□ -1.02
CDH3-209ENST00000569080 CUL4AQ13619 759 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 GNL2Q13823 731 aaKnown RBP8.68□□□□□ -1.02
CDH3-209ENST00000569080 TFDP1Q14186 410 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 FAM187BQ17R55 369 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 NOTUMQ6P988 496 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 PADI6Q6TGC4 694 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 TMEM184AQ6ZMB5 413 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 RBM23Q86U06 439 aaKnown RBP8.68□□□□□ -1.02
CDH3-209ENST00000569080 ZNF280BQ86YH2 543 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 ADHFE1Q8IWW8 467 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 GSTCDQ8NEC7 633 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 ERMNQ8TAM6 284 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 SUSD6Q92537 303 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 PPP2R3CQ969Q6 453 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 PGBD4Q96DM1 585 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 IGSF21Q96ID5 467 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 CPB2Q96IY4 423 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 NACC1Q96RE7 527 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 CDCA3Q99618 268 aaPredicted RBP8.68□□□□□ -1.02
CDH3-209ENST00000569080 CCDC113Q9H0I3 377 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 CSRNP2Q9H175 543 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 RNF39Q9H2S5 420 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 NXF3Q9H4D5 531 aaKnown RBP8.68□□□□□ -1.02
CDH3-209ENST00000569080 IGFLR1Q9H665 355 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 TLE6Q9H808 572 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 RSAD1Q9HA92 442 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 UPF2Q9HAU5 1272 aaKnown RBP8.68□□□□□ -1.02
CDH3-209ENST00000569080 MARCH5Q9NX47 278 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 PRKAG3Q9UGI9 489 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 CD207Q9UJ71 328 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 INPP5FQ9Y2H2 1132 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 HES2Q9Y543 173 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 ZMYM2Q9UBW7 1377 aa8.68□□□□□ -1.02
CDH3-209ENST00000569080 A0A1B0GUA9 196 aa8.67□□□□□ -1.02
CDH3-209ENST00000569080 ARHGEF35A5YM69 484 aa8.67□□□□□ -1.02
CDH3-209ENST00000569080 C2orf71A6NGG8 1288 aa8.67□□□□□ -1.02
CDH3-209ENST00000569080 LRRIQ4A6NIV6 560 aa8.67□□□□□ -1.02
CDH3-209ENST00000569080 LAD1O00515 517 aa8.67□□□□□ -1.02
CDH3-209ENST00000569080 CCT6AP40227 531 aaKnown RBP8.67□□□□□ -1.02
CDH3-209ENST00000569080 MLH1P40692 756 aa8.67□□□□□ -1.02
CDH3-209ENST00000569080 DSC1Q08554 894 aa8.67□□□□□ -1.02
CDH3-209ENST00000569080 MAPK7Q13164 816 aa8.67□□□□□ -1.02
CDH3-209ENST00000569080 PDIA5Q14554 519 aa8.67□□□□□ -1.02
CDH3-209ENST00000569080 RILPL1Q5EBL4 403 aa8.67□□□□□ -1.02
CDH3-209ENST00000569080 EP400NLQ6ZTU2 488 aa8.67□□□□□ -1.02
CDH3-209ENST00000569080 MAEAQ7L5Y9 396 aa8.67□□□□□ -1.02
CDH3-209ENST00000569080 KCNK18Q7Z418 384 aa8.67□□□□□ -1.02
CDH3-209ENST00000569080 CDR2LQ86X02 465 aaPredicted RBP8.67□□□□□ -1.02
CDH3-209ENST00000569080 RNF168Q8IYW5 571 aaPredicted RBP8.67□□□□□ -1.02
CDH3-209ENST00000569080 DAW1Q8N136 415 aa8.67□□□□□ -1.02
CDH3-209ENST00000569080 GJD3Q8N144 294 aa8.67□□□□□ -1.02
CDH3-209ENST00000569080 MRPL43Q8N983 215 aaKnown RBP8.67□□□□□ -1.02
CDH3-209ENST00000569080 SNX29Q8TEQ0 813 aa8.67□□□□□ -1.02
CDH3-209ENST00000569080 PRIMPOLQ96LW4 560 aa8.67□□□□□ -1.02
CDH3-209ENST00000569080 ZFP42Q96MM3 310 aa8.67□□□□□ -1.02
CDH3-209ENST00000569080 CCDC43Q96MW1 224 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms