RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 PRDM12Q9H4Q4 367 aa4.62□□□□□ -1.67
HMGB1P6-201ENST00000569046 AGO3Q9H9G7 860 aaKnown RBP4.62□□□□□ -1.67
HMGB1P6-201ENST00000569046 POLR3BQ9NW08 1133 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P6-201ENST00000569046 USP36Q9P275 1121 aaKnown RBP4.62□□□□□ -1.67
HMGB1P6-201ENST00000569046 TMPRSS11EQ9UL52 423 aa4.62□□□□□ -1.67
HMGB1P6-201ENST00000569046 PPP2R3BQ9Y5P8 575 aa4.62□□□□□ -1.67
HMGB1P6-201ENST00000569046 MYPNQ86TC9 1320 aa4.62□□□□□ -1.67
HMGB1P6-201ENST00000569046 ZMYM3Q14202 1370 aa4.62□□□□□ -1.67
HMGB1P6-201ENST00000569046 IQSEC2Q5JU85 1478 aa4.62□□□□□ -1.67
HMGB1P6-201ENST00000569046 ZNF518AQ6AHZ1 1483 aa4.62□□□□□ -1.67
HMGB1P6-201ENST00000569046 CEP170BQ9Y4F5 1589 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P6-201ENST00000569046 PREX2Q70Z35 1606 aa4.61□□□□□ -1.67
HMGB1P6-201ENST00000569046 ANKRD62A6NC57 917 aa4.61□□□□□ -1.67
HMGB1P6-201ENST00000569046 ZEB2O60315 1214 aa4.61□□□□□ -1.67
HMGB1P6-201ENST00000569046 KDM1AO60341 852 aa4.61□□□□□ -1.67
HMGB1P6-201ENST00000569046 ADCY7P51828 1080 aa4.61□□□□□ -1.67
HMGB1P6-201ENST00000569046 HNRNPMP52272 730 aaKnown RBP eCLIP4.61□□□□□ -1.67
HMGB1P6-201ENST00000569046 MANFP55145 182 aaKnown RBP4.61□□□□□ -1.67
HMGB1P6-201ENST00000569046 ADAM8P78325 824 aa4.61□□□□□ -1.67
HMGB1P6-201ENST00000569046 ATP2C1P98194 919 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P6-201ENST00000569046 CDSNQ15517 529 aa4.61□□□□□ -1.67
HMGB1P6-201ENST00000569046 KRT26Q7Z3Y9 468 aa4.61□□□□□ -1.67
HMGB1P6-201ENST00000569046 CLEC14AQ86T13 490 aa4.61□□□□□ -1.67
HMGB1P6-201ENST00000569046 C11orf74Q86VG3 221 aa4.61□□□□□ -1.67
HMGB1P6-201ENST00000569046 RASSF3Q86WH2 238 aa4.61□□□□□ -1.67
HMGB1P6-201ENST00000569046 LYSMD2Q8IV50 215 aa4.61□□□□□ -1.67
HMGB1P6-201ENST00000569046 TTC9BQ8N6N2 239 aa4.61□□□□□ -1.67
HMGB1P6-201ENST00000569046 CLRN3Q8NCR9 226 aa4.61□□□□□ -1.67
HMGB1P6-201ENST00000569046 GIMAP8Q8ND71 665 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P6-201ENST00000569046 WDR92Q96MX6 357 aa4.61□□□□□ -1.67
HMGB1P6-201ENST00000569046 NOL10Q9BSC4 688 aaKnown RBP4.61□□□□□ -1.67
HMGB1P6-201ENST00000569046 PLA2G12BQ9BX93 195 aa4.61□□□□□ -1.67
HMGB1P6-201ENST00000569046 ANO3Q9BYT9 981 aa4.61□□□□□ -1.67
HMGB1P6-201ENST00000569046 C12orf65Q9H3J6 166 aaKnown RBP4.61□□□□□ -1.67
HMGB1P6-201ENST00000569046 VTA1Q9NP79 307 aa4.61□□□□□ -1.67
HMGB1P6-201ENST00000569046 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.61□□□□□ -1.67
HMGB1P6-201ENST00000569046 PUF60Q9UHX1 559 aaKnown RBP4.61□□□□□ -1.67
HMGB1P6-201ENST00000569046 ZFR2Q9UPR6 939 aaKnown RBP4.61□□□□□ -1.67
HMGB1P6-201ENST00000569046 RBM8AQ9Y5S9 174 aaKnown RBP4.61□□□□□ -1.67
HMGB1P6-201ENST00000569046 DNMT1P26358 1616 aaKnown RBP4.61□□□□□ -1.67
HMGB1P6-201ENST00000569046 ALKQ9UM73 1620 aa4.61□□□□□ -1.67
HMGB1P6-201ENST00000569046 XIRP1Q702N8 1843 aaKnown RBP4.6□□□□□ -1.67
HMGB1P6-201ENST00000569046 ZNF623O75123 536 aa4.6□□□□□ -1.67
HMGB1P6-201ENST00000569046 CLSTN1O94985 981 aa4.6□□□□□ -1.67
HMGB1P6-201ENST00000569046 PFKMP08237 780 aa4.6□□□□□ -1.67
HMGB1P6-201ENST00000569046 CLEC2LP0C7M8 214 aa4.6□□□□□ -1.67
HMGB1P6-201ENST00000569046 ZNF20P17024 532 aa4.6□□□□□ -1.67
HMGB1P6-201ENST00000569046 STAT4Q14765 748 aa4.6□□□□□ -1.67
HMGB1P6-201ENST00000569046 ZNF585AQ6P3V2 769 aa4.6□□□□□ -1.67
HMGB1P6-201ENST00000569046 ZNF662Q6ZS27 426 aa4.6□□□□□ -1.67
HMGB1P6-201ENST00000569046 FRMD7Q6ZUT3 714 aa4.6□□□□□ -1.67
HMGB1P6-201ENST00000569046 HDGFL2Q7Z4V5 671 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P6-201ENST00000569046 CMIPQ8IY22 773 aa4.6□□□□□ -1.67
HMGB1P6-201ENST00000569046 FERMT2Q96AC1 680 aa4.6□□□□□ -1.67
HMGB1P6-201ENST00000569046 OR14A2Q96R54 314 aa4.6□□□□□ -1.67
HMGB1P6-201ENST00000569046 GPHA2Q96T91 129 aa4.6□□□□□ -1.67
HMGB1P6-201ENST00000569046 FDXACB1Q9BRP7 624 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P6-201ENST00000569046 C1QTNF3Q9BXJ4 246 aa4.6□□□□□ -1.67
HMGB1P6-201ENST00000569046 KRTAP4-9Q9BYQ8 210 aa4.6□□□□□ -1.67
HMGB1P6-201ENST00000569046 TOPORSQ9NS56 1045 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P6-201ENST00000569046 RGS17Q9UGC6 210 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P6-201ENST00000569046 JAG2Q9Y219 1238 aa4.6□□□□□ -1.67
HMGB1P6-201ENST00000569046 SBNO2Q9Y2G9 1366 aa4.6□□□□□ -1.67
HMGB1P6-201ENST00000569046 ABCC1P33527 1531 aa4.6□□□□□ -1.67
HMGB1P6-201ENST00000569046 SAMD9LQ8IVG5 1584 aa4.6□□□□□ -1.67
HMGB1P6-201ENST00000569046 REREQ9P2R6 1566 aa4.6□□□□□ -1.67
HMGB1P6-201ENST00000569046 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P6-201ENST00000569046 SLC26A4O43511 780 aa4.59□□□□□ -1.67
HMGB1P6-201ENST00000569046 TOM1O60784 492 aa4.59□□□□□ -1.67
HMGB1P6-201ENST00000569046 EIF5BO60841 1220 aaKnown RBP4.59□□□□□ -1.67
HMGB1P6-201ENST00000569046 H2AFYO75367 372 aaKnown RBP4.59□□□□□ -1.67
HMGB1P6-201ENST00000569046 RAD17O75943 681 aa4.59□□□□□ -1.67
HMGB1P6-201ENST00000569046 ADRB1P08588 477 aa4.59□□□□□ -1.67
HMGB1P6-201ENST00000569046 NCLP19338 710 aaKnown RBP4.59□□□□□ -1.67
HMGB1P6-201ENST00000569046 AGLP35573 1532 aa4.59□□□□□ -1.67
HMGB1P6-201ENST00000569046 TCIRG1Q13488 830 aa4.59□□□□□ -1.67
HMGB1P6-201ENST00000569046 RIN1Q13671 783 aa4.59□□□□□ -1.67
HMGB1P6-201ENST00000569046 TRIM25Q14258 630 aaKnown RBP4.59□□□□□ -1.67
HMGB1P6-201ENST00000569046 R3HDM1Q15032 1099 aaKnown RBP4.59□□□□□ -1.67
HMGB1P6-201ENST00000569046 CT83Q5H943 113 aa4.59□□□□□ -1.67
HMGB1P6-201ENST00000569046 CT47A1Q5JQC4 288 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P6-201ENST00000569046 Q6ZSN1 163 aa4.59□□□□□ -1.67
HMGB1P6-201ENST00000569046 ADGRE4PQ86SQ3 457 aa4.59□□□□□ -1.67
HMGB1P6-201ENST00000569046 SLC41A1Q8IVJ1 513 aa4.59□□□□□ -1.67
HMGB1P6-201ENST00000569046 SHCBP1Q8NEM2 672 aa4.59□□□□□ -1.67
HMGB1P6-201ENST00000569046 CHST13Q8NET6 341 aa4.59□□□□□ -1.67
HMGB1P6-201ENST00000569046 PPP1R14CQ8TAE6 165 aa4.59□□□□□ -1.67
HMGB1P6-201ENST00000569046 GFM2Q969S9 779 aaKnown RBP4.59□□□□□ -1.67
HMGB1P6-201ENST00000569046 SLC7A6OSQ96CW6 309 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P6-201ENST00000569046 NEURL4Q96JN8 1562 aa4.59□□□□□ -1.67
HMGB1P6-201ENST00000569046 RPL10LQ96L21 214 aaKnown RBP4.59□□□□□ -1.67
HMGB1P6-201ENST00000569046 MLH3Q9UHC1 1453 aa4.59□□□□□ -1.67
HMGB1P6-201ENST00000569046 USP18Q9UMW8 372 aa4.59□□□□□ -1.67
HMGB1P6-201ENST00000569046 APOBEC2Q9Y235 224 aaKnown RBP4.59□□□□□ -1.67
HMGB1P6-201ENST00000569046 NOC2LQ9Y3T9 749 aaKnown RBP4.59□□□□□ -1.67
HMGB1P6-201ENST00000569046 PRKAB1Q9Y478 270 aa4.59□□□□□ -1.67
HMGB1P6-201ENST00000569046 PCDHB6Q9Y5E3 794 aa4.59□□□□□ -1.67
HMGB1P6-201ENST00000569046 SLC30A1Q9Y6M5 507 aa4.59□□□□□ -1.67
HMGB1P6-201ENST00000569046 SYCP2Q9BX26 1530 aa4.58□□□□□ -1.68
HMGB1P6-201ENST00000569046 SHANK2Q9UPX8 1470 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms