RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 SLC9A2Q9UBY0 812 aa12.81□□□□□ -0.36
CDH3-208ENST00000569036 INPP5FQ9Y2H2 1132 aa12.81□□□□□ -0.36
CDH3-208ENST00000569036 NEUROG3Q9Y4Z2 214 aa12.81□□□□□ -0.36
CDH3-208ENST00000569036 COL4A2P08572 1712 aa12.81□□□□□ -0.36
CDH3-208ENST00000569036 ZMYM6O95789 1325 aa12.81□□□□□ -0.36
CDH3-208ENST00000569036 COL1A2P08123 1366 aa12.81□□□□□ -0.36
CDH3-208ENST00000569036 WDR81Q562E7 1941 aa12.8□□□□□ -0.36
CDH3-208ENST00000569036 HBP1O60381 514 aa12.8□□□□□ -0.36
CDH3-208ENST00000569036 C22orf31O95567 290 aa12.8□□□□□ -0.36
CDH3-208ENST00000569036 SOD2P04179 222 aa12.8□□□□□ -0.36
CDH3-208ENST00000569036 ACTR2P61160 394 aa12.8□□□□□ -0.36
CDH3-208ENST00000569036 NTHL1P78549 312 aa12.8□□□□□ -0.36
CDH3-208ENST00000569036 PLA2G2CQ5R387 149 aa12.8□□□□□ -0.36
CDH3-208ENST00000569036 HEATR6Q6AI08 1181 aaKnown RBP12.8□□□□□ -0.36
CDH3-208ENST00000569036 GRASPQ7Z6J2 395 aaPredicted RBP12.8□□□□□ -0.36
CDH3-208ENST00000569036 IQCA1Q86XH1 822 aa12.8□□□□□ -0.36
CDH3-208ENST00000569036 PROSER1Q86XN7 944 aa12.8□□□□□ -0.36
CDH3-208ENST00000569036 ZNF280BQ86YH2 543 aa12.8□□□□□ -0.36
CDH3-208ENST00000569036 LPPQ93052 612 aa12.8□□□□□ -0.36
CDH3-208ENST00000569036 HERC2P3Q9BVR0 1158 aa12.8□□□□□ -0.36
CDH3-208ENST00000569036 ADAMTS10Q9H324 1103 aa12.8□□□□□ -0.36
CDH3-208ENST00000569036 RXFP1Q9HBX9 757 aa12.8□□□□□ -0.36
CDH3-208ENST00000569036 DACH1Q9UI36 760 aa12.8□□□□□ -0.36
CDH3-208ENST00000569036 MAD2L2Q9UI95 211 aa12.8□□□□□ -0.36
CDH3-208ENST00000569036 HECTD1Q9ULT8 2610 aa12.8□□□□□ -0.36
CDH3-208ENST00000569036 K7ESF4 209 aa12.79□□□□□ -0.36
CDH3-208ENST00000569036 TGM5O43548 720 aa12.79□□□□□ -0.36
CDH3-208ENST00000569036 EIF4BP23588 611 aaKnown RBP12.79□□□□□ -0.36
CDH3-208ENST00000569036 SLC26A2P50443 739 aa12.79□□□□□ -0.36
CDH3-208ENST00000569036 GAS6Q14393 721 aa12.79□□□□□ -0.36
CDH3-208ENST00000569036 LONRF3Q496Y0 759 aa12.79□□□□□ -0.36
CDH3-208ENST00000569036 KIAA1211LQ6NV74 962 aa12.79□□□□□ -0.36
CDH3-208ENST00000569036 USP17L6PQ6QN14 398 aa12.79□□□□□ -0.36
CDH3-208ENST00000569036 GLB1LQ6UWU2 654 aa12.79□□□□□ -0.36
CDH3-208ENST00000569036 TAS1R1Q7RTX1 841 aa12.79□□□□□ -0.36
CDH3-208ENST00000569036 PALB2Q86YC2 1186 aa12.79□□□□□ -0.36
CDH3-208ENST00000569036 GLIS3Q8NEA6 775 aa12.79□□□□□ -0.36
CDH3-208ENST00000569036 SMARCC2Q8TAQ2 1214 aa12.79□□□□□ -0.36
CDH3-208ENST00000569036 LOXL4Q96JB6 756 aa12.79□□□□□ -0.36
CDH3-208ENST00000569036 ZSCAN10Q96SZ4 725 aaPredicted RBP12.79□□□□□ -0.36
CDH3-208ENST00000569036 RNF41Q9H4P4 317 aaPredicted RBP12.79□□□□□ -0.36
CDH3-208ENST00000569036 LMAN1LQ9HAT1 526 aa12.79□□□□□ -0.36
CDH3-208ENST00000569036 SSX2IPQ9Y2D8 614 aa12.79□□□□□ -0.36
CDH3-208ENST00000569036 MSRB2Q9Y3D2 182 aa12.79□□□□□ -0.36
CDH3-208ENST00000569036 UBIAD1Q9Y5Z9 338 aa12.79□□□□□ -0.36
CDH3-208ENST00000569036 NOTCH4Q99466 2003 aa12.78□□□□□ -0.36
CDH3-208ENST00000569036 MEIS3P2A8K0S8 358 aa12.78□□□□□ -0.36
CDH3-208ENST00000569036 HYAL3O43820 417 aaPredicted RBP12.78□□□□□ -0.36
CDH3-208ENST00000569036 GAS2O43903 313 aaKnown RBP12.78□□□□□ -0.36
CDH3-208ENST00000569036 FGFR4P22455 802 aa12.78□□□□□ -0.36
CDH3-208ENST00000569036 PHKA2P46019 1235 aa12.78□□□□□ -0.36
CDH3-208ENST00000569036 GLUD2P49448 558 aa12.78□□□□□ -0.36
CDH3-208ENST00000569036 NLRP11P59045 1033 aaKnown RBP12.78□□□□□ -0.36
CDH3-208ENST00000569036 ZNF484Q5JVG2 852 aa12.78□□□□□ -0.36
CDH3-208ENST00000569036 TCEAL6Q6IPX3 200 aa12.78□□□□□ -0.36
CDH3-208ENST00000569036 METTL13Q8N6R0 699 aa12.78□□□□□ -0.36
CDH3-208ENST00000569036 ITFG1Q8TB96 612 aa12.78□□□□□ -0.36
CDH3-208ENST00000569036 TCEAL3Q969E4 200 aa12.78□□□□□ -0.36
CDH3-208ENST00000569036 EDEM2Q9BV94 578 aa12.78□□□□□ -0.36
CDH3-208ENST00000569036 DACT1Q9NYF0 836 aa12.78□□□□□ -0.36
CDH3-208ENST00000569036 KLK13Q9UKR3 277 aa12.78□□□□□ -0.36
CDH3-208ENST00000569036 MYO18BQ8IUG5 2567 aa12.78□□□□□ -0.36
CDH3-208ENST00000569036 PNMA6FA0A0J9YX94 578 aa12.77□□□□□ -0.37
CDH3-208ENST00000569036 PALM3A6NDB9 673 aaPredicted RBP12.77□□□□□ -0.37
CDH3-208ENST00000569036 C4orf47A7E2U8 309 aa12.77□□□□□ -0.37
CDH3-208ENST00000569036 MAN2B1O00754 1011 aa12.77□□□□□ -0.37
CDH3-208ENST00000569036 MEIS2O14770 477 aa12.77□□□□□ -0.37
CDH3-208ENST00000569036 OFD1O75665 1012 aa12.77□□□□□ -0.37
CDH3-208ENST00000569036 ZMYND10O75800 440 aa12.77□□□□□ -0.37
CDH3-208ENST00000569036 DDHD2O94830 711 aa12.77□□□□□ -0.37
CDH3-208ENST00000569036 PAPSS2O95340 614 aaPredicted RBP12.77□□□□□ -0.37
CDH3-208ENST00000569036 C1RP00736 705 aa12.77□□□□□ -0.37
CDH3-208ENST00000569036 CAPNS1P04632 268 aa12.77□□□□□ -0.37
CDH3-208ENST00000569036 CEACAM1P13688 526 aa12.77□□□□□ -0.37
CDH3-208ENST00000569036 MPLP40238 635 aa12.77□□□□□ -0.37
CDH3-208ENST00000569036 RAP1GAPP47736 663 aa12.77□□□□□ -0.37
CDH3-208ENST00000569036 CLCN3P51790 818 aa12.77□□□□□ -0.37
CDH3-208ENST00000569036 TROAPQ12815 778 aa12.77□□□□□ -0.37
CDH3-208ENST00000569036 SPEM1Q8N4L4 309 aa12.77□□□□□ -0.37
CDH3-208ENST00000569036 PI4K2BQ8TCG2 481 aa12.77□□□□□ -0.37
CDH3-208ENST00000569036 DNASE1L2Q92874 299 aa12.77□□□□□ -0.37
CDH3-208ENST00000569036 ZNF668Q96K58 619 aaPredicted RBP12.77□□□□□ -0.37
CDH3-208ENST00000569036 PLA2G2FQ9BZM2 168 aa12.77□□□□□ -0.37
CDH3-208ENST00000569036 RIOX1Q9H6W3 641 aa12.77□□□□□ -0.37
CDH3-208ENST00000569036 JADE2Q9NQC1 790 aa12.77□□□□□ -0.37
CDH3-208ENST00000569036 ZBTB40Q9NUA8 1239 aa12.77□□□□□ -0.37
CDH3-208ENST00000569036 CFAP46Q8IYW2 2715 aa12.76□□□□□ -0.37
CDH3-208ENST00000569036 IGKV6D-21A0A0A0MT36 114 aa12.76□□□□□ -0.37
CDH3-208ENST00000569036 PIK3CDO00329 1044 aa12.76□□□□□ -0.37
CDH3-208ENST00000569036 NRP1O14786 923 aa12.76□□□□□ -0.37
CDH3-208ENST00000569036 CYTH3O43739 400 aa12.76□□□□□ -0.37
CDH3-208ENST00000569036 ECI2O75521 394 aa12.76□□□□□ -0.37
CDH3-208ENST00000569036 ATG7O95352 703 aa12.76□□□□□ -0.37
CDH3-208ENST00000569036 HOXC13P31276 330 aa12.76□□□□□ -0.37
CDH3-208ENST00000569036 LILRA6Q6PI73 481 aa12.76□□□□□ -0.37
CDH3-208ENST00000569036 WDR5BQ86VZ2 330 aa12.76□□□□□ -0.37
CDH3-208ENST00000569036 NPAS3Q8IXF0 933 aa12.76□□□□□ -0.37
CDH3-208ENST00000569036 RNF168Q8IYW5 571 aaPredicted RBP12.76□□□□□ -0.37
CDH3-208ENST00000569036 CUL5Q93034 780 aa12.76□□□□□ -0.37
CDH3-208ENST00000569036 VPS45Q9NRW7 570 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms