RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	TMC7	Q7Z402	723 aa		11.48	□□□□□ -0.57
UBR1-207	ENST00000568782	ZNF598	Q86UK7	904 aa	Known RBP	11.48	□□□□□ -0.57
UBR1-207	ENST00000568782	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.48	□□□□□ -0.57
UBR1-207	ENST00000568782	KCTD17	Q8N5Z5	321 aa		11.48	□□□□□ -0.57
UBR1-207	ENST00000568782	IGSF22	Q8N9C0	903 aa		11.48	□□□□□ -0.57
UBR1-207	ENST00000568782	RASSF8	Q8NHQ8	419 aa		11.48	□□□□□ -0.57
UBR1-207	ENST00000568782	KIFAP3	Q92845	792 aa		11.48	□□□□□ -0.57
UBR1-207	ENST00000568782	PRIMPOL	Q96LW4	560 aa		11.48	□□□□□ -0.57
UBR1-207	ENST00000568782	CDCA3	Q99618	268 aa	Predicted RBP	11.48	□□□□□ -0.57
UBR1-207	ENST00000568782	ADPGK	Q9BRR6	497 aa		11.48	□□□□□ -0.57
UBR1-207	ENST00000568782	GBP3	Q9H0R5	595 aa		11.48	□□□□□ -0.57
UBR1-207	ENST00000568782	BHMT2	Q9H2M3	363 aa		11.48	□□□□□ -0.57
UBR1-207	ENST00000568782	CWH43	Q9H720	699 aa		11.48	□□□□□ -0.57
UBR1-207	ENST00000568782	RSAD1	Q9HA92	442 aa		11.48	□□□□□ -0.57
UBR1-207	ENST00000568782	NGRN	Q9NPE2	291 aa	Known RBP	11.48	□□□□□ -0.57
UBR1-207	ENST00000568782	XPNPEP1	Q9NQW7	623 aa		11.48	□□□□□ -0.57
UBR1-207	ENST00000568782	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.48	□□□□□ -0.57
UBR1-207	ENST00000568782	PHLPP2	Q6ZVD8	1323 aa		11.47	□□□□□ -0.57
UBR1-207	ENST00000568782	VWA3A	A6NCI4	1184 aa		11.47	□□□□□ -0.57
UBR1-207	ENST00000568782	ALDH2	P05091	517 aa		11.47	□□□□□ -0.57
UBR1-207	ENST00000568782	GLRA2	P23416	452 aa		11.47	□□□□□ -0.57
UBR1-207	ENST00000568782	NAMPT	P43490	491 aa		11.47	□□□□□ -0.57
UBR1-207	ENST00000568782	TOB1	P50616	345 aa	Predicted RBP	11.47	□□□□□ -0.57
UBR1-207	ENST00000568782	EFNA5	P52803	228 aa		11.47	□□□□□ -0.57
UBR1-207	ENST00000568782	BCAR1	P56945	870 aa		11.47	□□□□□ -0.57
UBR1-207	ENST00000568782	GIT2	Q14161	759 aa		11.47	□□□□□ -0.57
UBR1-207	ENST00000568782	MAPK6	Q16659	721 aa		11.47	□□□□□ -0.57
UBR1-207	ENST00000568782	CLLU1OS	Q5K130	101 aa		11.47	□□□□□ -0.57
UBR1-207	ENST00000568782	PTCRA	Q6ISU1	281 aa	Predicted RBP	11.47	□□□□□ -0.57
UBR1-207	ENST00000568782	SLC27A1	Q6PCB7	646 aa		11.47	□□□□□ -0.57
UBR1-207	ENST00000568782	RBM23	Q86U06	439 aa	Known RBP	11.47	□□□□□ -0.57
UBR1-207	ENST00000568782	C4orf32	Q8N8J7	132 aa		11.47	□□□□□ -0.57
UBR1-207	ENST00000568782	ASAP3	Q8TDY4	903 aa		11.47	□□□□□ -0.57
UBR1-207	ENST00000568782	LPP	Q93052	612 aa		11.47	□□□□□ -0.57
UBR1-207	ENST00000568782	CALML4	Q96GE6	196 aa		11.47	□□□□□ -0.57
UBR1-207	ENST00000568782	TCF25	Q9BQ70	676 aa		11.47	□□□□□ -0.57
UBR1-207	ENST00000568782	CSRNP2	Q9H175	543 aa		11.47	□□□□□ -0.57
UBR1-207	ENST00000568782	MINDY3	Q9H8M7	445 aa		11.47	□□□□□ -0.57
UBR1-207	ENST00000568782	REV3L	O60673	3130 aa		11.47	□□□□□ -0.57
UBR1-207	ENST00000568782	ATG2A	Q2TAZ0	1938 aa		11.47	□□□□□ -0.57
UBR1-207	ENST00000568782		H3BQ06	376 aa	Predicted RBP	11.46	□□□□□ -0.57
UBR1-207	ENST00000568782	N4BP3	O15049	544 aa		11.46	□□□□□ -0.57
UBR1-207	ENST00000568782	TSPAN1	O60635	241 aa		11.46	□□□□□ -0.57
UBR1-207	ENST00000568782	OFD1	O75665	1012 aa		11.46	□□□□□ -0.57
UBR1-207	ENST00000568782	EYA4	O95677	639 aa		11.46	□□□□□ -0.57
UBR1-207	ENST00000568782	LIG1	P18858	919 aa		11.46	□□□□□ -0.57
UBR1-207	ENST00000568782	NCL	P19338	710 aa	Known RBP	11.46	□□□□□ -0.57
UBR1-207	ENST00000568782	SSTR3	P32745	418 aa	Predicted RBP	11.46	□□□□□ -0.57
UBR1-207	ENST00000568782	UBA7	P41226	1012 aa		11.46	□□□□□ -0.57
UBR1-207	ENST00000568782	NRIP1	P48552	1158 aa		11.46	□□□□□ -0.57
UBR1-207	ENST00000568782	ATP2C1	P98194	919 aa	Predicted RBP	11.46	□□□□□ -0.57
UBR1-207	ENST00000568782	MBTD1	Q05BQ5	628 aa		11.46	□□□□□ -0.57
UBR1-207	ENST00000568782	HYAL1	Q12794	435 aa		11.46	□□□□□ -0.57
UBR1-207	ENST00000568782	DMP1	Q13316	513 aa	Predicted RBP	11.46	□□□□□ -0.57
UBR1-207	ENST00000568782	PRPF4B	Q13523	1007 aa	Known RBP	11.46	□□□□□ -0.57
UBR1-207	ENST00000568782	SMC1A	Q14683	1233 aa	Known RBP	11.46	□□□□□ -0.57
UBR1-207	ENST00000568782	LRRC55	Q6ZSA7	311 aa		11.46	□□□□□ -0.57
UBR1-207	ENST00000568782	MRPL10	Q7Z7H8	261 aa	Known RBP	11.46	□□□□□ -0.57
UBR1-207	ENST00000568782	INTS4	Q96HW7	963 aa	Known RBP	11.46	□□□□□ -0.57
UBR1-207	ENST00000568782	CPB2	Q96IY4	423 aa		11.46	□□□□□ -0.57
UBR1-207	ENST00000568782	AK8	Q96MA6	479 aa		11.46	□□□□□ -0.57
UBR1-207	ENST00000568782	DRC1	Q96MC2	740 aa		11.46	□□□□□ -0.57
UBR1-207	ENST00000568782	RPS6KC1	Q96S38	1066 aa		11.46	□□□□□ -0.57
UBR1-207	ENST00000568782	TIPIN	Q9BVW5	301 aa		11.46	□□□□□ -0.57
UBR1-207	ENST00000568782	GPRC5C	Q9NQ84	441 aa		11.46	□□□□□ -0.57
UBR1-207	ENST00000568782	FAN1	Q9Y2M0	1017 aa		11.46	□□□□□ -0.57
UBR1-207	ENST00000568782	CCDC169	A6NNP5	214 aa		11.45	□□□□□ -0.58
UBR1-207	ENST00000568782		K7ERI5	159 aa		11.45	□□□□□ -0.58
UBR1-207	ENST00000568782	SLC26A4	O43511	780 aa		11.45	□□□□□ -0.58
UBR1-207	ENST00000568782	SSB	P05455	408 aa	Known RBP eCLIP	11.45	□□□□□ -0.58
UBR1-207	ENST00000568782	PDIA4	P13667	645 aa	Known RBP	11.45	□□□□□ -0.58
UBR1-207	ENST00000568782	ATF7	P17544	494 aa	Predicted RBP	11.45	□□□□□ -0.58
UBR1-207	ENST00000568782	ARF4	P18085	180 aa	Predicted RBP	11.45	□□□□□ -0.58
UBR1-207	ENST00000568782	HOXA11	P31270	313 aa	Predicted RBP	11.45	□□□□□ -0.58
UBR1-207	ENST00000568782	SMTN	P53814	917 aa		11.45	□□□□□ -0.58
UBR1-207	ENST00000568782	CUL4A	Q13619	759 aa		11.45	□□□□□ -0.58
UBR1-207	ENST00000568782	PLPP4	Q5VZY2	271 aa		11.45	□□□□□ -0.58
UBR1-207	ENST00000568782	HSCB	Q8IWL3	235 aa		11.45	□□□□□ -0.58
UBR1-207	ENST00000568782	EFHB	Q8N7U6	833 aa		11.45	□□□□□ -0.58
UBR1-207	ENST00000568782	POP1	Q99575	1024 aa	Known RBP	11.45	□□□□□ -0.58
UBR1-207	ENST00000568782	TMEM175	Q9BSA9	504 aa		11.45	□□□□□ -0.58
UBR1-207	ENST00000568782	APOL6	Q9BWW8	343 aa		11.45	□□□□□ -0.58
UBR1-207	ENST00000568782	C17orf75	Q9HAS0	396 aa		11.45	□□□□□ -0.58
UBR1-207	ENST00000568782	RNF19A	Q9NV58	838 aa		11.45	□□□□□ -0.58
UBR1-207	ENST00000568782	TBC1D13	Q9NVG8	400 aa		11.45	□□□□□ -0.58
UBR1-207	ENST00000568782	PARP2	Q9UGN5	583 aa		11.45	□□□□□ -0.58
UBR1-207	ENST00000568782	CD207	Q9UJ71	328 aa		11.45	□□□□□ -0.58
UBR1-207	ENST00000568782	GIT1	Q9Y2X7	761 aa		11.45	□□□□□ -0.58
UBR1-207	ENST00000568782	IPP	Q9Y573	584 aa		11.45	□□□□□ -0.58
UBR1-207	ENST00000568782	GTF3C3	Q9Y5Q9	886 aa		11.45	□□□□□ -0.58
UBR1-207	ENST00000568782	BRWD1	Q9NSI6	2320 aa		11.44	□□□□□ -0.58
UBR1-207	ENST00000568782		A0A1B0GUA9	196 aa		11.44	□□□□□ -0.58
UBR1-207	ENST00000568782	SPDYE4	A6NLX3	237 aa		11.44	□□□□□ -0.58
UBR1-207	ENST00000568782	NT5C1B-RDH14	C9J2C7	533 aa		11.44	□□□□□ -0.58
UBR1-207	ENST00000568782		E9PMD0	336 aa		11.44	□□□□□ -0.58
UBR1-207	ENST00000568782		K7ELQ4	463 aa	Predicted RBP	11.44	□□□□□ -0.58
UBR1-207	ENST00000568782	NPTXR	O95502	500 aa		11.44	□□□□□ -0.58
UBR1-207	ENST00000568782	CXCL14	O95715	111 aa		11.44	□□□□□ -0.58
UBR1-207	ENST00000568782	POMC	P01189	267 aa		11.44	□□□□□ -0.58
UBR1-207	ENST00000568782	PRKCB	P05771	671 aa		11.44	□□□□□ -0.58

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