RNA–Protein interactions for RNA: ENST00000568539.1

SF3B3-212, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-212ENST00000568539 CTSHP09668 335 aa9.31□□□□□ -0.92
SF3B3-212ENST00000568539 MYBP10242 640 aa9.31□□□□□ -0.92
SF3B3-212ENST00000568539 DARSP14868 501 aaKnown RBP9.31□□□□□ -0.92
SF3B3-212ENST00000568539 SCP2P22307 547 aa9.31□□□□□ -0.92
SF3B3-212ENST00000568539 EIF4BP23588 611 aaKnown RBP9.31□□□□□ -0.92
SF3B3-212ENST00000568539 PHKA2P46019 1235 aa9.31□□□□□ -0.92
SF3B3-212ENST00000568539 EFNA5P52803 228 aa9.31□□□□□ -0.92
SF3B3-212ENST00000568539 SMTNP53814 917 aa9.31□□□□□ -0.92
SF3B3-212ENST00000568539 GTF2BQ00403 316 aa9.31□□□□□ -0.92
SF3B3-212ENST00000568539 BFSP2Q13515 415 aa9.31□□□□□ -0.92
SF3B3-212ENST00000568539 ALCAMQ13740 583 aa9.31□□□□□ -0.92
SF3B3-212ENST00000568539 ZC2HC1CQ53FD0 456 aaPredicted RBP9.31□□□□□ -0.92
SF3B3-212ENST00000568539 COBLL1Q53SF7 1204 aa9.31□□□□□ -0.92
SF3B3-212ENST00000568539 HAUS6Q7Z4H7 955 aa9.31□□□□□ -0.92
SF3B3-212ENST00000568539 CCDC155Q8N6L0 562 aa9.31□□□□□ -0.92
SF3B3-212ENST00000568539 SLC17A8Q8NDX2 589 aa9.31□□□□□ -0.92
SF3B3-212ENST00000568539 TMEM40Q8WWA1 233 aa9.31□□□□□ -0.92
SF3B3-212ENST00000568539 OSMRQ99650 979 aa9.31□□□□□ -0.92
SF3B3-212ENST00000568539 NOC4LQ9BVI4 516 aaKnown RBP9.31□□□□□ -0.92
SF3B3-212ENST00000568539 GCOM2Q9BZD3 368 aaPredicted RBP9.31□□□□□ -0.92
SF3B3-212ENST00000568539 GTPBP4Q9BZE4 634 aaKnown RBP9.31□□□□□ -0.92
SF3B3-212ENST00000568539 CCDC113Q9H0I3 377 aa9.31□□□□□ -0.92
SF3B3-212ENST00000568539 C2orf40Q9H1Z8 148 aa9.31□□□□□ -0.92
SF3B3-212ENST00000568539 TMEM134Q9H6X4 195 aa9.31□□□□□ -0.92
SF3B3-212ENST00000568539 MINDY3Q9H8M7 445 aa9.31□□□□□ -0.92
SF3B3-212ENST00000568539 GINS2Q9Y248 185 aa9.31□□□□□ -0.92
SF3B3-212ENST00000568539 CDY2AQ9Y6F7 541 aa9.31□□□□□ -0.92
SF3B3-212ENST00000568539 SPTBN5Q9NRC6 3674 aaKnown RBP9.31□□□□□ -0.92
SF3B3-212ENST00000568539 ARID2Q68CP9 1835 aa9.31□□□□□ -0.92
SF3B3-212ENST00000568539 PHLPP2Q6ZVD8 1323 aa9.31□□□□□ -0.92
SF3B3-212ENST00000568539 TRIM66O15016 1216 aa9.3□□□□□ -0.92
SF3B3-212ENST00000568539 EIF3DO15371 548 aaKnown RBP eCLIP9.3□□□□□ -0.92
SF3B3-212ENST00000568539 EVI5O60447 810 aa9.3□□□□□ -0.92
SF3B3-212ENST00000568539 IQCF3P0C7M6 154 aa9.3□□□□□ -0.92
SF3B3-212ENST00000568539 SELPP16109 830 aa9.3□□□□□ -0.92
SF3B3-212ENST00000568539 ABCD1P33897 745 aa9.3□□□□□ -0.92
SF3B3-212ENST00000568539 HOXD13P35453 343 aa9.3□□□□□ -0.92
SF3B3-212ENST00000568539 NLRP12P59046 1061 aa9.3□□□□□ -0.92
SF3B3-212ENST00000568539 MBTD1Q05BQ5 628 aa9.3□□□□□ -0.92
SF3B3-212ENST00000568539 KCNA1Q09470 495 aa9.3□□□□□ -0.92
SF3B3-212ENST00000568539 BMT2Q1RMZ1 405 aa9.3□□□□□ -0.92
SF3B3-212ENST00000568539 DPCR1Q3MIW9 517 aa9.3□□□□□ -0.92
SF3B3-212ENST00000568539 SASS6Q6UVJ0 657 aa9.3□□□□□ -0.92
SF3B3-212ENST00000568539 STXBP4Q6ZWJ1 553 aa9.3□□□□□ -0.92
SF3B3-212ENST00000568539 LRRC8DQ7L1W4 858 aa9.3□□□□□ -0.92
SF3B3-212ENST00000568539 TAS1R3Q7RTX0 852 aa9.3□□□□□ -0.92
SF3B3-212ENST00000568539 SRGAP1Q7Z6B7 1085 aa9.3□□□□□ -0.92
SF3B3-212ENST00000568539 ZBTB8OSQ8IWT0 167 aa9.3□□□□□ -0.92
SF3B3-212ENST00000568539 SMYD4Q8IYR2 804 aaPredicted RBP9.3□□□□□ -0.92
SF3B3-212ENST00000568539 GUF1Q8N442 669 aaKnown RBP9.3□□□□□ -0.92
SF3B3-212ENST00000568539 MLKLQ8NB16 471 aa9.3□□□□□ -0.92
SF3B3-212ENST00000568539 ZNF507Q8TCN5 953 aa9.3□□□□□ -0.92
SF3B3-212ENST00000568539 SCFD1Q8WVM8 642 aa9.3□□□□□ -0.92
SF3B3-212ENST00000568539 HVCN1Q96D96 273 aa9.3□□□□□ -0.92
SF3B3-212ENST00000568539 SCLT1Q96NL6 688 aa9.3□□□□□ -0.92
SF3B3-212ENST00000568539 FUCA2Q9BTY2 467 aa9.3□□□□□ -0.92
SF3B3-212ENST00000568539 OSBPL7Q9BZF2 842 aa9.3□□□□□ -0.92
SF3B3-212ENST00000568539 GZF1Q9H116 711 aaPredicted RBP9.3□□□□□ -0.92
SF3B3-212ENST00000568539 HIPK3Q9H422 1215 aa9.3□□□□□ -0.92
SF3B3-212ENST00000568539 FZD8Q9H461 694 aa9.3□□□□□ -0.92
SF3B3-212ENST00000568539 TMEM39AQ9NV64 488 aa9.3□□□□□ -0.92
SF3B3-212ENST00000568539 TBX20Q9UMR3 447 aa9.3□□□□□ -0.92
SF3B3-212ENST00000568539 UMODL1Q5DID0 1318 aa9.3□□□□□ -0.92
SF3B3-212ENST00000568539 TRIM43BA6NCK2 446 aa9.29□□□□□ -0.92
SF3B3-212ENST00000568539 PPP1R3GB7ZBB8 358 aa9.29□□□□□ -0.92
SF3B3-212ENST00000568539 INO80B-WBP1J3KQ70 363 aa9.29□□□□□ -0.92
SF3B3-212ENST00000568539 K7ERI5 159 aa9.29□□□□□ -0.92
SF3B3-212ENST00000568539 KIAA0355O15063 1070 aa9.29□□□□□ -0.92
SF3B3-212ENST00000568539 CSDE1O75534 798 aaKnown RBP9.29□□□□□ -0.92
SF3B3-212ENST00000568539 PRPF6O94906 941 aaKnown RBP9.29□□□□□ -0.92
SF3B3-212ENST00000568539 EDN1P05305 212 aa9.29□□□□□ -0.92
SF3B3-212ENST00000568539 PRCPP42785 496 aa9.29□□□□□ -0.92
SF3B3-212ENST00000568539 TYRO3Q06418 890 aa9.29□□□□□ -0.92
SF3B3-212ENST00000568539 STRN3Q13033 797 aa9.29□□□□□ -0.92
SF3B3-212ENST00000568539 LPIN1Q14693 890 aa9.29□□□□□ -0.92
SF3B3-212ENST00000568539 MBTPS1Q14703 1052 aa9.29□□□□□ -0.92
SF3B3-212ENST00000568539 GPNMBQ14956 572 aa9.29□□□□□ -0.92
SF3B3-212ENST00000568539 MAPK6Q16659 721 aa9.29□□□□□ -0.92
SF3B3-212ENST00000568539 AMHR2Q16671 573 aa9.29□□□□□ -0.92
SF3B3-212ENST00000568539 FAM187BQ17R55 369 aa9.29□□□□□ -0.92
SF3B3-212ENST00000568539 FBXO47Q5MNV8 452 aa9.29□□□□□ -0.92
SF3B3-212ENST00000568539 L1TD1Q5T7N2 865 aaKnown RBP9.29□□□□□ -0.92
SF3B3-212ENST00000568539 MAP4K3Q8IVH8 894 aa9.29□□□□□ -0.92
SF3B3-212ENST00000568539 MYOCDQ8IZQ8 938 aa9.29□□□□□ -0.92
SF3B3-212ENST00000568539 ADSSL1Q8N142 457 aa9.29□□□□□ -0.92
SF3B3-212ENST00000568539 SP7Q8TDD2 431 aaPredicted RBP9.29□□□□□ -0.92
SF3B3-212ENST00000568539 TRIM43Q96BQ3 446 aaPredicted RBP9.29□□□□□ -0.92
SF3B3-212ENST00000568539 HTATIP2Q9BUP3 242 aa9.29□□□□□ -0.92
SF3B3-212ENST00000568539 PPP1R12CQ9BZL4 782 aa9.29□□□□□ -0.92
SF3B3-212ENST00000568539 INO80BQ9C086 356 aaPredicted RBP9.29□□□□□ -0.92
SF3B3-212ENST00000568539 WNT8AQ9H1J5 351 aa9.29□□□□□ -0.92
SF3B3-212ENST00000568539 PRMT7Q9NVM4 692 aaPredicted RBP9.29□□□□□ -0.92
SF3B3-212ENST00000568539 MAPK8IP1Q9UQF2 711 aa9.29□□□□□ -0.92
SF3B3-212ENST00000568539 NOC2LQ9Y3T9 749 aaKnown RBP9.29□□□□□ -0.92
SF3B3-212ENST00000568539 SQORQ9Y6N5 450 aa9.29□□□□□ -0.92
SF3B3-212ENST00000568539 UBE4BO95155 1302 aa9.29□□□□□ -0.92
SF3B3-212ENST00000568539 ZMYM2Q9UBW7 1377 aa9.28□□□□□ -0.92
SF3B3-212ENST00000568539 RBAK-RBAKDNI3L0D1 243 aa9.28□□□□□ -0.92
SF3B3-212ENST00000568539 ACKR2O00590 384 aa9.28□□□□□ -0.92
SF3B3-212ENST00000568539 B4GALT5O43286 388 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms