RNA–Protein interactions for RNA: ENST00000568488.5

CLK3-223, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-223ENST00000568488 SMG5Q9UPR3 1016 aaKnown RBP18.25■□□□□ 0.51
CLK3-223ENST00000568488 PRG3Q9Y2Y8 225 aaPredicted RBP18.25■□□□□ 0.51
CLK3-223ENST00000568488 PCDHGA2Q9Y5H1 932 aa18.25■□□□□ 0.51
CLK3-223ENST00000568488 FAM170BA6NMN3 283 aa18.24■□□□□ 0.51
CLK3-223ENST00000568488 ANHXE9PGG2 379 aa18.24■□□□□ 0.51
CLK3-223ENST00000568488 ZNF862O60290 1169 aa18.24■□□□□ 0.51
CLK3-223ENST00000568488 POMCP01189 267 aa18.24■□□□□ 0.51
CLK3-223ENST00000568488 ADRB1P08588 477 aa18.24■□□□□ 0.51
CLK3-223ENST00000568488 RAB27AP51159 221 aa18.24■□□□□ 0.51
CLK3-223ENST00000568488 AFF1P51825 1210 aaKnown RBP18.24■□□□□ 0.51
CLK3-223ENST00000568488 PRKCEQ02156 737 aa18.24■□□□□ 0.51
CLK3-223ENST00000568488 CATSPER4Q7RTX7 472 aa18.24■□□□□ 0.51
CLK3-223ENST00000568488 ZNF707Q96C28 371 aaPredicted RBP18.24■□□□□ 0.51
CLK3-223ENST00000568488 TMEM175Q9BSA9 504 aa18.24■□□□□ 0.51
CLK3-223ENST00000568488 RHOBTB2Q9BYZ6 727 aa18.24■□□□□ 0.51
CLK3-223ENST00000568488 INO80BQ9C086 356 aaPredicted RBP18.24■□□□□ 0.51
CLK3-223ENST00000568488 NT5C3AQ9H0P0 336 aa18.24■□□□□ 0.51
CLK3-223ENST00000568488 MTF2Q9Y483 593 aaPredicted RBP18.24■□□□□ 0.51
CLK3-223ENST00000568488 V9GY48 417 aaPredicted RBP18.24■□□□□ 0.51
CLK3-223ENST00000568488 WDR64B1ANS9 1081 aa18.23■□□□□ 0.51
CLK3-223ENST00000568488 GAS2O43903 313 aaKnown RBP18.23■□□□□ 0.51
CLK3-223ENST00000568488 ZNF623O75123 536 aa18.23■□□□□ 0.51
CLK3-223ENST00000568488 IGHDP01880 384 aa18.23■□□□□ 0.51
CLK3-223ENST00000568488 LIFRP42702 1097 aa18.23■□□□□ 0.51
CLK3-223ENST00000568488 CLK2P49760 499 aaKnown RBP18.23■□□□□ 0.51
CLK3-223ENST00000568488 CDC42EP1Q00587 391 aa18.23■□□□□ 0.51
CLK3-223ENST00000568488 SYNE3Q6ZMZ3 975 aa18.23■□□□□ 0.51
CLK3-223ENST00000568488 TEX2Q8IWB9 1127 aa18.23■□□□□ 0.51
CLK3-223ENST00000568488 HERC2P3Q9BVR0 1158 aa18.23■□□□□ 0.51
CLK3-223ENST00000568488 GLT8D2Q9H1C3 349 aa18.23■□□□□ 0.51
CLK3-223ENST00000568488 ZSCAN32Q9NX65 697 aa18.23■□□□□ 0.51
CLK3-223ENST00000568488 KANSL3Q9P2N6 904 aa18.23■□□□□ 0.51
CLK3-223ENST00000568488 PCDHB2Q9Y5E7 798 aa18.23■□□□□ 0.51
CLK3-223ENST00000568488 RBM8AQ9Y5S9 174 aaKnown RBP18.23■□□□□ 0.51
CLK3-223ENST00000568488 MAP1BP46821 2468 aaKnown RBP18.23■□□□□ 0.51
CLK3-223ENST00000568488 CFAP47Q6ZTR5 3102 aa18.23■□□□□ 0.51
CLK3-223ENST00000568488 CYP3A4P08684 503 aa18.22■□□□□ 0.51
CLK3-223ENST00000568488 CHMLP26374 656 aa18.22■□□□□ 0.51
CLK3-223ENST00000568488 OR1G1P47890 313 aa18.22■□□□□ 0.51
CLK3-223ENST00000568488 GLUD2P49448 558 aa18.22■□□□□ 0.51
CLK3-223ENST00000568488 DNM2P50570 870 aa18.22■□□□□ 0.51
CLK3-223ENST00000568488 SETQ01105 290 aaPredicted RBP18.22■□□□□ 0.51
CLK3-223ENST00000568488 MLF2Q15773 248 aaPredicted RBP18.22■□□□□ 0.51
CLK3-223ENST00000568488 MTERF2Q49AM1 385 aa18.22■□□□□ 0.51
CLK3-223ENST00000568488 SLC44A4Q53GD3 710 aa18.22■□□□□ 0.51
CLK3-223ENST00000568488 PRR16Q569H4 304 aa18.22■□□□□ 0.51
CLK3-223ENST00000568488 TSSK4Q6SA08 328 aa18.22■□□□□ 0.51
CLK3-223ENST00000568488 PARM1Q6UWI2 310 aa18.22■□□□□ 0.51
CLK3-223ENST00000568488 AGMOQ6ZNB7 445 aa18.22■□□□□ 0.51
CLK3-223ENST00000568488 RHPN2Q8IUC4 686 aa18.22■□□□□ 0.51
CLK3-223ENST00000568488 GLYCTKQ8IVS8 523 aa18.22■□□□□ 0.51
CLK3-223ENST00000568488 FGF14Q92915 247 aa18.22■□□□□ 0.51
CLK3-223ENST00000568488 MAP4K1Q92918 833 aa18.22■□□□□ 0.51
CLK3-223ENST00000568488 RSAD1Q9HA92 442 aa18.22■□□□□ 0.51
CLK3-223ENST00000568488 DISC1Q9NRI5 854 aa18.22■□□□□ 0.51
CLK3-223ENST00000568488 RALYQ9UKM9 306 aaKnown RBP18.22■□□□□ 0.51
CLK3-223ENST00000568488 CNTNAP5Q8WYK1 1306 aa18.22■□□□□ 0.51
CLK3-223ENST00000568488 CHMP2AO43633 222 aa18.21■□□□□ 0.51
CLK3-223ENST00000568488 CD72P21854 359 aa18.21■□□□□ 0.51
CLK3-223ENST00000568488 FSHRP23945 695 aa18.21■□□□□ 0.51
CLK3-223ENST00000568488 COL9A3Q14050 684 aaPredicted RBP18.21■□□□□ 0.51
CLK3-223ENST00000568488 UGCGQ16739 394 aa18.21■□□□□ 0.51
CLK3-223ENST00000568488 PPM1JQ5JR12 505 aa18.21■□□□□ 0.51
CLK3-223ENST00000568488 ZBTB44Q8NCP5 570 aa18.21■□□□□ 0.51
CLK3-223ENST00000568488 HDAC7Q8WUI4 952 aa18.21■□□□□ 0.51
CLK3-223ENST00000568488 SH2D3AQ9BRG2 576 aa18.21■□□□□ 0.51
CLK3-223ENST00000568488 PRKD2Q9BZL6 878 aa18.21■□□□□ 0.51
CLK3-223ENST00000568488 EPC1Q9H2F5 836 aa18.21■□□□□ 0.51
CLK3-223ENST00000568488 PLEKHA4Q9H4M7 779 aa18.21■□□□□ 0.51
CLK3-223ENST00000568488 BARHL2Q9NY43 387 aa18.21■□□□□ 0.51
CLK3-223ENST00000568488 SUCLA2Q9P2R7 463 aaPredicted RBP18.21■□□□□ 0.51
CLK3-223ENST00000568488 GMEB2Q9UKD1 530 aa18.21■□□□□ 0.51
CLK3-223ENST00000568488 DOCK8Q8NF50 2099 aa18.2■□□□□ 0.5
CLK3-223ENST00000568488 TGM5O43548 720 aa18.2■□□□□ 0.5
CLK3-223ENST00000568488 GSPT1P15170 499 aaKnown RBP18.2■□□□□ 0.5
CLK3-223ENST00000568488 KCNA4P22459 653 aa18.2■□□□□ 0.5
CLK3-223ENST00000568488 TGM1P22735 817 aa18.2■□□□□ 0.5
CLK3-223ENST00000568488 PRKCQQ04759 706 aa18.2■□□□□ 0.5
CLK3-223ENST00000568488 KSR1Q8IVT5 923 aa18.2■□□□□ 0.5
CLK3-223ENST00000568488 NLRP4Q96MN2 994 aa18.2■□□□□ 0.5
CLK3-223ENST00000568488 RXFP1Q9HBX9 757 aa18.2■□□□□ 0.5
CLK3-223ENST00000568488 PARD6AQ9NPB6 346 aa18.2■□□□□ 0.5
CLK3-223ENST00000568488 RBM28Q9NW13 759 aaKnown RBP18.2■□□□□ 0.5
CLK3-223ENST00000568488 MARCH5Q9NX47 278 aa18.2■□□□□ 0.5
CLK3-223ENST00000568488 SEPT9Q9UHD8 586 aaPredicted RBP18.2■□□□□ 0.5
CLK3-223ENST00000568488 hCG_1984214I3L0E3 225 aa18.19■□□□□ 0.5
CLK3-223ENST00000568488 TBC1D4O60343 1298 aa18.19■□□□□ 0.5
CLK3-223ENST00000568488 ZNF410Q86VK4 478 aa18.19■□□□□ 0.5
CLK3-223ENST00000568488 ZNF713Q8N859 430 aaPredicted RBP18.19■□□□□ 0.5
CLK3-223ENST00000568488 B3GALT6Q96L58 329 aa18.19■□□□□ 0.5
CLK3-223ENST00000568488 DDX23Q9BUQ8 820 aaKnown RBP18.19■□□□□ 0.5
CLK3-223ENST00000568488 LTB4R2Q9NPC1 389 aa18.19■□□□□ 0.5
CLK3-223ENST00000568488 ZDHHC7Q9NXF8 308 aa18.19■□□□□ 0.5
CLK3-223ENST00000568488 ZFP37Q9Y6Q3 630 aaPredicted RBP18.19■□□□□ 0.5
CLK3-223ENST00000568488 MIA3Q5JRA6 1907 aa18.19■□□□□ 0.5
CLK3-223ENST00000568488 CHD6Q8TD26 2715 aa18.18■□□□□ 0.5
CLK3-223ENST00000568488 CHD8Q9HCK8 2581 aa18.18■□□□□ 0.5
CLK3-223ENST00000568488 TMEM150BA6NC51 233 aa18.18■□□□□ 0.5
CLK3-223ENST00000568488 SGSM2O43147 1006 aa18.18■□□□□ 0.5
CLK3-223ENST00000568488 LILRB5O75023 590 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms