RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 PGBD4Q96DM1 585 aa9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 MRPL9Q9BYD2 267 aaKnown RBP9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 NT5C3AQ9H0P0 336 aa9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 CSRNP2Q9H175 543 aa9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 BHMT2Q9H2M3 363 aa9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 NSUN3Q9H649 340 aaKnown RBP9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 UBN1Q9NPG3 1134 aa9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 AAASQ9NRG9 546 aa9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 PRMT7Q9NVM4 692 aaPredicted RBP9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 THEGQ9P2T0 379 aa9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 PIN4Q9Y237 131 aaKnown RBP9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 PCDHB12Q9Y5F1 795 aa9.07□□□□□ -0.96
HDGFL3-205ENST00000568129 VWA3AA6NCI4 1184 aa9.06□□□□□ -0.96
HDGFL3-205ENST00000568129 MEIS3P2A8K0S8 358 aa9.06□□□□□ -0.96
HDGFL3-205ENST00000568129 ACKR2O00590 384 aa9.06□□□□□ -0.96
HDGFL3-205ENST00000568129 STX6O43752 255 aa9.06□□□□□ -0.96
HDGFL3-205ENST00000568129 EFEMP2O95967 443 aa9.06□□□□□ -0.96
HDGFL3-205ENST00000568129 NASPP49321 788 aaPredicted RBP9.06□□□□□ -0.96
HDGFL3-205ENST00000568129 KCNC3Q14003 757 aa9.06□□□□□ -0.96
HDGFL3-205ENST00000568129 PPP2R5AQ15172 486 aa9.06□□□□□ -0.96
HDGFL3-205ENST00000568129 PAN2Q504Q3 1202 aaKnown RBP9.06□□□□□ -0.96
HDGFL3-205ENST00000568129 ARSHQ5FYA8 562 aa9.06□□□□□ -0.96
HDGFL3-205ENST00000568129 TJAP1Q5JTD0 557 aa9.06□□□□□ -0.96
HDGFL3-205ENST00000568129 KCNT2Q6UVM3 1135 aa9.06□□□□□ -0.96
HDGFL3-205ENST00000568129 LRRC43Q8N309 656 aa9.06□□□□□ -0.96
HDGFL3-205ENST00000568129 GSTCDQ8NEC7 633 aa9.06□□□□□ -0.96
HDGFL3-205ENST00000568129 LRRC15Q8TF66 581 aa9.06□□□□□ -0.96
HDGFL3-205ENST00000568129 POF1BQ8WVV4 589 aa9.06□□□□□ -0.96
HDGFL3-205ENST00000568129 SYMPKQ92797 1274 aaKnown RBP9.06□□□□□ -0.96
HDGFL3-205ENST00000568129 HLA-CQ95604 372 aa9.06□□□□□ -0.96
HDGFL3-205ENST00000568129 C2orf40Q9H1Z8 148 aa9.06□□□□□ -0.96
HDGFL3-205ENST00000568129 TMEM134Q9H6X4 195 aa9.06□□□□□ -0.96
HDGFL3-205ENST00000568129 ALG13Q9NP73 1137 aaKnown RBP9.06□□□□□ -0.96
HDGFL3-205ENST00000568129 BMP2KQ9NSY1 1161 aaPredicted RBP9.06□□□□□ -0.96
HDGFL3-205ENST00000568129 ARHGAP28Q9P2N2 729 aa9.06□□□□□ -0.96
HDGFL3-205ENST00000568129 KANSL3Q9P2N6 904 aa9.06□□□□□ -0.96
HDGFL3-205ENST00000568129 HCSTQ9UBK5 93 aa9.06□□□□□ -0.96
HDGFL3-205ENST00000568129 KCNG1Q9UIX4 513 aa9.06□□□□□ -0.96
HDGFL3-205ENST00000568129 SRPRBQ9Y5M8 271 aaKnown RBP9.06□□□□□ -0.96
HDGFL3-205ENST00000568129 INO80B-WBP1J3KQ70 363 aa9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 FGF18O76093 207 aa9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 ERLIN2O94905 339 aa9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 GALTP07902 379 aa9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 PPM1AP35813 382 aa9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 LTBRP36941 435 aa9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 EFNA5P52803 228 aa9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 GRIN1Q05586 938 aa9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 DSC1Q08554 894 aa9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 NCBP1Q09161 790 aaKnown RBP9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 HYAL1Q12794 435 aa9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 ADAM15Q13444 863 aa9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 SLC39A14Q15043 492 aa9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 AAK1Q2M2I8 961 aa9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 LEXMQ3ZCV2 418 aa9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 TCEAL5Q5H9L2 206 aa9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 NOMO2Q5JPE7 1267 aa9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 SLC27A1Q6PCB7 646 aa9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 TMEM184AQ6ZMB5 413 aa9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 SLC39A11Q8N1S5 342 aa9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 HELQQ8TDG4 1101 aa9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 SPIRE2Q8WWL2 714 aa9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 PPM1EQ8WY54 764 aa9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 MRPS27Q92552 414 aaKnown RBP9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 LPPQ93052 612 aa9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 PABPC5Q96DU9 382 aaKnown RBP9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 CCDC43Q96MW1 224 aaKnown RBP9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 RUSC1Q9BVN2 902 aa9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 COL25A1Q9BXS0 654 aaPredicted RBP9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 EIF2AQ9BY44 585 aaKnown RBP9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 NRDE2Q9H7Z3 1164 aa9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 PTPRHQ9HD43 1115 aa9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 BLOC1S4Q9NUP1 217 aa9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 TBC1D13Q9NVG8 400 aa9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 FBXO2Q9UK22 296 aaPredicted RBP9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 GIT1Q9Y2X7 761 aa9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 RBM19Q9Y4C8 960 aaKnown RBP9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 IPPQ9Y573 584 aa9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 CLIC4Q9Y696 253 aa9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 MUC3AQ02505 3323 aa9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 PHLPP2Q6ZVD8 1323 aa9.05□□□□□ -0.96
HDGFL3-205ENST00000568129 ANK1P16157 1881 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 VWA8A3KMH1 1905 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 TTC28Q96AY4 2481 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 VPS37CA5D8V6 355 aaPredicted RBP9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 LRRIQ4A6NIV6 560 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 TTLL13PA6NNM8 815 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 B4GALT5O43286 388 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 HIP1RO75146 1068 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 EDN1P05305 212 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 PLA2G4BP0C869 781 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 PROZP22891 400 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 IRS1P35568 1242 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 DDIT3P35638 169 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 NPTX2P47972 431 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 AFF1P51825 1210 aaKnown RBP9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 ZNF131P52739 623 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 BCAR1P56945 870 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 ERVFC1P60507 584 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 MAPK6Q16659 721 aa9.04□□□□□ -0.96
HDGFL3-205ENST00000568129 NT5DC1Q5TFE4 455 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms