RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 GDF9O60383 454 aa15.62■□□□□ 0.09
SMG1-213ENST00000567737 DARSP14868 501 aaKnown RBP15.62■□□□□ 0.09
SMG1-213ENST00000567737 SDSP20132 328 aa15.62■□□□□ 0.09
SMG1-213ENST00000567737 CD72P21854 359 aa15.62■□□□□ 0.09
SMG1-213ENST00000567737 FGFR4P22455 802 aa15.62■□□□□ 0.09
SMG1-213ENST00000567737 RPS9P46781 194 aaKnown RBP15.62■□□□□ 0.09
SMG1-213ENST00000567737 TRDNQ13061 729 aa15.62■□□□□ 0.09
SMG1-213ENST00000567737 PPP2R5DQ14738 602 aa15.62■□□□□ 0.09
SMG1-213ENST00000567737 LONRF3Q496Y0 759 aa15.62■□□□□ 0.09
SMG1-213ENST00000567737 SWSAP1Q6NVH7 229 aa15.62■□□□□ 0.09
SMG1-213ENST00000567737 EFCAB12Q6NXP0 572 aa15.62■□□□□ 0.09
SMG1-213ENST00000567737 MIS18BP1Q6P0N0 1132 aa15.62■□□□□ 0.09
SMG1-213ENST00000567737 PARM1Q6UWI2 310 aa15.62■□□□□ 0.09
SMG1-213ENST00000567737 TRMT1LQ7Z2T5 733 aaKnown RBP15.62■□□□□ 0.09
SMG1-213ENST00000567737 CATIPQ7Z7H3 387 aa15.62■□□□□ 0.09
SMG1-213ENST00000567737 HDAC7Q8WUI4 952 aa15.62■□□□□ 0.09
SMG1-213ENST00000567737 CLDN23Q96B33 292 aa15.62■□□□□ 0.09
SMG1-213ENST00000567737 ZNF668Q96K58 619 aaPredicted RBP15.62■□□□□ 0.09
SMG1-213ENST00000567737 DSCC1Q9BVC3 393 aa15.62■□□□□ 0.09
SMG1-213ENST00000567737 NT5C3AQ9H0P0 336 aa15.62■□□□□ 0.09
SMG1-213ENST00000567737 AGO4Q9HCK5 861 aaKnown RBP15.62■□□□□ 0.09
SMG1-213ENST00000567737 CHST12Q9NRB3 414 aa15.62■□□□□ 0.09
SMG1-213ENST00000567737 ZDHHC7Q9NXF8 308 aa15.62■□□□□ 0.09
SMG1-213ENST00000567737 DOCK8Q8NF50 2099 aa15.61■□□□□ 0.09
SMG1-213ENST00000567737 CCNE2O96020 404 aa15.61■□□□□ 0.09
SMG1-213ENST00000567737 SOD2P04179 222 aa15.61■□□□□ 0.09
SMG1-213ENST00000567737 ALDH2P05091 517 aa15.61■□□□□ 0.09
SMG1-213ENST00000567737 FSHRP23945 695 aa15.61■□□□□ 0.09
SMG1-213ENST00000567737 TARSP26639 723 aaKnown RBP15.61■□□□□ 0.09
SMG1-213ENST00000567737 MTSS1LQ765P7 747 aa15.61■□□□□ 0.09
SMG1-213ENST00000567737 URGCPQ8TCY9 931 aa15.61■□□□□ 0.09
SMG1-213ENST00000567737 NLRP7Q8WX94 980 aa15.61■□□□□ 0.09
SMG1-213ENST00000567737 FAM193BQ96PV7 902 aaPredicted RBP15.61■□□□□ 0.09
SMG1-213ENST00000567737 HERC2P3Q9BVR0 1158 aa15.61■□□□□ 0.09
SMG1-213ENST00000567737 PLEKHA4Q9H4M7 779 aa15.61■□□□□ 0.09
SMG1-213ENST00000567737 FAM217BQ9NTX9 383 aaPredicted RBP15.61■□□□□ 0.09
SMG1-213ENST00000567737 FAN1Q9Y2M0 1017 aa15.61■□□□□ 0.09
SMG1-213ENST00000567737 COL4A3Q01955 1670 aa15.6■□□□□ 0.09
SMG1-213ENST00000567737 OFD1O75665 1012 aa15.6■□□□□ 0.09
SMG1-213ENST00000567737 PAPLNO95428 1278 aa15.6■□□□□ 0.09
SMG1-213ENST00000567737 SPATA31D3P0C874 917 aa15.6■□□□□ 0.09
SMG1-213ENST00000567737 ATP4AP20648 1035 aa15.6■□□□□ 0.09
SMG1-213ENST00000567737 GPC3P51654 580 aa15.6■□□□□ 0.09
SMG1-213ENST00000567737 MTAPQ13126 283 aa15.6■□□□□ 0.09
SMG1-213ENST00000567737 CEP55Q53EZ4 464 aa15.6■□□□□ 0.09
SMG1-213ENST00000567737 ANKRD45Q5TZF3 282 aa15.6■□□□□ 0.09
SMG1-213ENST00000567737 TWF2Q6IBS0 349 aaKnown RBP15.6■□□□□ 0.09
SMG1-213ENST00000567737 CWC27Q6UX04 472 aaKnown RBP15.6■□□□□ 0.09
SMG1-213ENST00000567737 UNQ6494/PRO21346Q6UXR6 183 aa15.6■□□□□ 0.09
SMG1-213ENST00000567737 SPATA31D4Q6ZUB0 917 aa15.6■□□□□ 0.09
SMG1-213ENST00000567737 TPRG1Q6ZUI0 275 aa15.6■□□□□ 0.09
SMG1-213ENST00000567737 ZNF280BQ86YH2 543 aa15.6■□□□□ 0.09
SMG1-213ENST00000567737 LRRC71Q8N4P6 559 aa15.6■□□□□ 0.09
SMG1-213ENST00000567737 TMEM175Q9BSA9 504 aa15.6■□□□□ 0.09
SMG1-213ENST00000567737 TRAIPQ9BWF2 469 aa15.6■□□□□ 0.09
SMG1-213ENST00000567737 PRKD2Q9BZL6 878 aa15.6■□□□□ 0.09
SMG1-213ENST00000567737 SENP2Q9HC62 589 aa15.6■□□□□ 0.09
SMG1-213ENST00000567737 MRPS17Q9Y2R5 130 aaKnown RBP15.6■□□□□ 0.09
SMG1-213ENST00000567737 SMARCA1P28370 1054 aa15.59■□□□□ 0.09
SMG1-213ENST00000567737 GLUD2P49448 558 aa15.59■□□□□ 0.09
SMG1-213ENST00000567737 SART3Q15020 963 aaKnown RBP15.59■□□□□ 0.09
SMG1-213ENST00000567737 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.59■□□□□ 0.09
SMG1-213ENST00000567737 CTCFLQ8NI51 663 aaPredicted RBP15.59■□□□□ 0.09
SMG1-213ENST00000567737 FAM105AQ9NUU6 356 aa15.59■□□□□ 0.09
SMG1-213ENST00000567737 CDH7Q9ULB5 785 aa15.59■□□□□ 0.09
SMG1-213ENST00000567737 FASNP49327 2511 aaKnown RBP15.59■□□□□ 0.09
SMG1-213ENST00000567737 MEIS3P2A8K0S8 358 aa15.58■□□□□ 0.08
SMG1-213ENST00000567737 C1QTNF9BB2RNN3 333 aa15.58■□□□□ 0.08
SMG1-213ENST00000567737 GAS2O43903 313 aaKnown RBP15.58■□□□□ 0.08
SMG1-213ENST00000567737 B4GALT3O60512 393 aa15.58■□□□□ 0.08
SMG1-213ENST00000567737 C1QTNF9P0C862 333 aa15.58■□□□□ 0.08
SMG1-213ENST00000567737 RAB27AP51159 221 aa15.58■□□□□ 0.08
SMG1-213ENST00000567737 ADCY1Q08828 1119 aa15.58■□□□□ 0.08
SMG1-213ENST00000567737 SIM2Q14190 667 aaPredicted RBP15.58■□□□□ 0.08
SMG1-213ENST00000567737 AASDHQ4L235 1098 aaPredicted RBP15.58■□□□□ 0.08
SMG1-213ENST00000567737 ZNF852Q6ZMS4 543 aa15.58■□□□□ 0.08
SMG1-213ENST00000567737 PALB2Q86YC2 1186 aa15.58■□□□□ 0.08
SMG1-213ENST00000567737 LINC01465Q8N7H1 131 aa15.58■□□□□ 0.08
SMG1-213ENST00000567737 PGBD4Q96DM1 585 aa15.58■□□□□ 0.08
SMG1-213ENST00000567737 LZTS2Q9BRK4 669 aa15.58■□□□□ 0.08
SMG1-213ENST00000567737 PHF20Q9BVI0 1012 aa15.58■□□□□ 0.08
SMG1-213ENST00000567737 GCOM2Q9BZD3 368 aaPredicted RBP15.58■□□□□ 0.08
SMG1-213ENST00000567737 LY9Q9HBG7 655 aa15.58■□□□□ 0.08
SMG1-213ENST00000567737 RXFP1Q9HBX9 757 aa15.58■□□□□ 0.08
SMG1-213ENST00000567737 DIAPH3Q9NSV4 1193 aa15.58■□□□□ 0.08
SMG1-213ENST00000567737 MAFBQ9Y5Q3 323 aaPredicted RBP15.58■□□□□ 0.08
SMG1-213ENST00000567737 MYH15Q9Y2K3 1946 aa15.57■□□□□ 0.08
SMG1-213ENST00000567737 NRP1O14786 923 aa15.57■□□□□ 0.08
SMG1-213ENST00000567737 CSDE1O75534 798 aaKnown RBP15.57■□□□□ 0.08
SMG1-213ENST00000567737 DDHD2O94830 711 aa15.57■□□□□ 0.08
SMG1-213ENST00000567737 C1RP00736 705 aa15.57■□□□□ 0.08
SMG1-213ENST00000567737 TDGF1P13385 188 aa15.57■□□□□ 0.08
SMG1-213ENST00000567737 PRKCSHP14314 528 aaPredicted RBP15.57■□□□□ 0.08
SMG1-213ENST00000567737 SFPQP23246 707 aaKnown RBP eCLIP15.57■□□□□ 0.08
SMG1-213ENST00000567737 LIMK1P53667 647 aa15.57■□□□□ 0.08
SMG1-213ENST00000567737 KANSL3Q9P2N6 904 aa15.57■□□□□ 0.08
SMG1-213ENST00000567737 PIN4Q9Y237 131 aaKnown RBP15.57■□□□□ 0.08
SMG1-213ENST00000567737 ANKRD11Q6UB99 2663 aaPredicted RBP15.57■□□□□ 0.08
SMG1-213ENST00000567737 FRYQ5TBA9 3013 aa15.57■□□□□ 0.08
SMG1-213ENST00000567737 MEIS1O00470 390 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms