RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 MRPL9Q9BYD2 267 aaKnown RBP7.68□□□□□ -1.18
SF3B3-209ENST00000567635 RAB34Q9BZG1 259 aa7.68□□□□□ -1.18
SF3B3-209ENST00000567635 POLR3FQ9H1D9 316 aaPredicted RBP7.68□□□□□ -1.18
SF3B3-209ENST00000567635 KANSL3Q9P2N6 904 aa7.68□□□□□ -1.18
SF3B3-209ENST00000567635 LRWD1Q9UFC0 647 aa7.68□□□□□ -1.18
SF3B3-209ENST00000567635 PCDHB6Q9Y5E3 794 aa7.68□□□□□ -1.18
SF3B3-209ENST00000567635 STK24Q9Y6E0 443 aa7.68□□□□□ -1.18
SF3B3-209ENST00000567635 CITO14578 2027 aa7.68□□□□□ -1.18
SF3B3-209ENST00000567635 FSD2A1L4K1 749 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 ARHGEF35A5YM69 484 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 MEIS3P2A8K0S8 358 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 NT5C1B-RDH14C9J2C7 533 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 H3BQV1 296 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 FSCN2O14926 492 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 PER2O15055 1255 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 LINC01565O15544 149 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 USO1O60763 962 aaKnown RBP7.67□□□□□ -1.18
SF3B3-209ENST00000567635 CXCL14O95715 111 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 ALDH2P05091 517 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 ITGA4P13612 1032 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 CYP11B2P19099 503 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 NCLP19338 710 aaKnown RBP7.67□□□□□ -1.18
SF3B3-209ENST00000567635 GLRA2P23416 452 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 GJB2P29033 226 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 PBX3P40426 434 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 PRPHP41219 470 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 NDUFV1P49821 464 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 DLX2Q07687 328 aaPredicted RBP7.67□□□□□ -1.18
SF3B3-209ENST00000567635 CAPSQ13938 189 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 BMS1Q14692 1282 aaKnown RBP7.67□□□□□ -1.18
SF3B3-209ENST00000567635 RILPL1Q5EBL4 403 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 HAUS3Q68CZ6 603 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 NOTUMQ6P988 496 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 POTEGQ6S5H5 508 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 PADI6Q6TGC4 694 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 DTHD1Q6ZMT9 781 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 AGMOQ6ZNB7 445 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 MAEAQ7L5Y9 396 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 TMC7Q7Z402 723 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 SLC39A11Q8N1S5 342 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 IGSF22Q8N9C0 903 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 URGCPQ8TCY9 931 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 CCDC51Q96ER9 411 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 CPB2Q96IY4 423 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 CDCA3Q99618 268 aaPredicted RBP7.67□□□□□ -1.18
SF3B3-209ENST00000567635 NFKBIZQ9BYH8 718 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 NRDE2Q9H7Z3 1164 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 NGRNQ9NPE2 291 aaKnown RBP7.67□□□□□ -1.18
SF3B3-209ENST00000567635 UBN1Q9NPG3 1134 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.67□□□□□ -1.18
SF3B3-209ENST00000567635 TBC1D13Q9NVG8 400 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 PRKAG3Q9UGI9 489 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 CD207Q9UJ71 328 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 KIAA1024Q9UPX6 916 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 SMC3Q9UQE7 1217 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 INPP5FQ9Y2H2 1132 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.67□□□□□ -1.18
SF3B3-209ENST00000567635 PCDHGC5Q9Y5F6 944 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 CNTNAP2Q9UHC6 1331 aa7.67□□□□□ -1.18
SF3B3-209ENST00000567635 VCANP13611 3396 aa7.66□□□□□ -1.18
SF3B3-209ENST00000567635 A0A1B0GUA9 196 aa7.66□□□□□ -1.18
SF3B3-209ENST00000567635 LRRIQ4A6NIV6 560 aa7.66□□□□□ -1.18
SF3B3-209ENST00000567635 TSPAN1O60635 241 aa7.66□□□□□ -1.18
SF3B3-209ENST00000567635 ZC3H11AO75152 810 aaKnown RBP eCLIP7.66□□□□□ -1.18
SF3B3-209ENST00000567635 TBX10O75333 385 aa7.66□□□□□ -1.18
SF3B3-209ENST00000567635 GALTP07902 379 aa7.66□□□□□ -1.18
SF3B3-209ENST00000567635 IL9P15248 144 aa7.66□□□□□ -1.18
SF3B3-209ENST00000567635 ARF4P18085 180 aaPredicted RBP7.66□□□□□ -1.18
SF3B3-209ENST00000567635 SSTR3P32745 418 aaPredicted RBP7.66□□□□□ -1.18
SF3B3-209ENST00000567635 MBTD1Q05BQ5 628 aa7.66□□□□□ -1.18
SF3B3-209ENST00000567635 COASYQ13057 564 aa7.66□□□□□ -1.18
SF3B3-209ENST00000567635 CLUL1Q15846 466 aa7.66□□□□□ -1.18
SF3B3-209ENST00000567635 IL17AQ16552 155 aa7.66□□□□□ -1.18
SF3B3-209ENST00000567635 ECM1Q16610 540 aa7.66□□□□□ -1.18
SF3B3-209ENST00000567635 AMHR2Q16671 573 aa7.66□□□□□ -1.18
SF3B3-209ENST00000567635 DUSP6Q16828 381 aa7.66□□□□□ -1.18
SF3B3-209ENST00000567635 PLPP4Q5VZY2 271 aa7.66□□□□□ -1.18
SF3B3-209ENST00000567635 KRT79Q5XKE5 535 aa7.66□□□□□ -1.18
SF3B3-209ENST00000567635 LARP1BQ659C4 914 aaKnown RBP7.66□□□□□ -1.18
SF3B3-209ENST00000567635 DDX53Q86TM3 631 aaKnown RBP7.66□□□□□ -1.18
SF3B3-209ENST00000567635 ZNF280BQ86YH2 543 aa7.66□□□□□ -1.18
SF3B3-209ENST00000567635 GJD3Q8N144 294 aa7.66□□□□□ -1.18
SF3B3-209ENST00000567635 MRPL43Q8N983 215 aaKnown RBP7.66□□□□□ -1.18
SF3B3-209ENST00000567635 SMG8Q8ND04 991 aaKnown RBP7.66□□□□□ -1.18
SF3B3-209ENST00000567635 TMEM169Q96HH4 297 aa7.66□□□□□ -1.18
SF3B3-209ENST00000567635 MSLNLQ96KJ4 702 aa7.66□□□□□ -1.18
SF3B3-209ENST00000567635 FAM193BQ96PV7 902 aaPredicted RBP7.66□□□□□ -1.18
SF3B3-209ENST00000567635 TCF25Q9BQ70 676 aa7.66□□□□□ -1.18
SF3B3-209ENST00000567635 EIF2AQ9BY44 585 aaKnown RBP7.66□□□□□ -1.18
SF3B3-209ENST00000567635 GBP3Q9H0R5 595 aa7.66□□□□□ -1.18
SF3B3-209ENST00000567635 CSRNP2Q9H175 543 aa7.66□□□□□ -1.18
SF3B3-209ENST00000567635 RSAD1Q9HA92 442 aa7.66□□□□□ -1.18
SF3B3-209ENST00000567635 CD320Q9NPF0 282 aa7.66□□□□□ -1.18
SF3B3-209ENST00000567635 GPRC5CQ9NQ84 441 aa7.66□□□□□ -1.18
SF3B3-209ENST00000567635 ENTPD7Q9NQZ7 604 aa7.66□□□□□ -1.18
SF3B3-209ENST00000567635 DDX19AQ9NUU7 478 aaKnown RBP7.66□□□□□ -1.18
SF3B3-209ENST00000567635 CLEC1BQ9P126 229 aa7.66□□□□□ -1.18
SF3B3-209ENST00000567635 DNM3Q9UQ16 869 aa7.66□□□□□ -1.18
SF3B3-209ENST00000567635 FAN1Q9Y2M0 1017 aa7.66□□□□□ -1.18
SF3B3-209ENST00000567635 IPPQ9Y573 584 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms