RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 CLIC2O15247 247 aa16.88■□□□□ 0.29
COMMD4-215ENST00000566843 DIAPH2O60879 1101 aa16.88■□□□□ 0.29
COMMD4-215ENST00000566843 WFS1O76024 890 aa16.88■□□□□ 0.29
COMMD4-215ENST00000566843 KRT16P08779 473 aa16.88■□□□□ 0.29
COMMD4-215ENST00000566843 PSMC2P35998 433 aaKnown RBP16.88■□□□□ 0.29
COMMD4-215ENST00000566843 GABPAQ06546 454 aa16.88■□□□□ 0.29
COMMD4-215ENST00000566843 TTBK2Q6IQ55 1244 aa16.88■□□□□ 0.29
COMMD4-215ENST00000566843 VSTM1Q6UX27 236 aa16.88■□□□□ 0.29
COMMD4-215ENST00000566843 ZNF804AQ7Z570 1209 aa16.88■□□□□ 0.29
COMMD4-215ENST00000566843 FAM186BQ8IYM0 893 aa16.88■□□□□ 0.29
COMMD4-215ENST00000566843 UHMK1Q8TAS1 419 aaKnown RBP16.88■□□□□ 0.29
COMMD4-215ENST00000566843 CKAP2Q8WWK9 683 aa16.88■□□□□ 0.29
COMMD4-215ENST00000566843 SERPINB12Q96P63 405 aa16.88■□□□□ 0.29
COMMD4-215ENST00000566843 RPS6KC1Q96S38 1066 aa16.88■□□□□ 0.29
COMMD4-215ENST00000566843 ZSWIM1Q9BR11 485 aa16.88■□□□□ 0.29
COMMD4-215ENST00000566843 MKNK1Q9BUB5 465 aa16.88■□□□□ 0.29
COMMD4-215ENST00000566843 RXFP1Q9HBX9 757 aa16.88■□□□□ 0.29
COMMD4-215ENST00000566843 STK24Q9Y6E0 443 aa16.88■□□□□ 0.29
COMMD4-215ENST00000566843 PFASO15067 1338 aa16.88■□□□□ 0.29
COMMD4-215ENST00000566843 FOCADQ5VW36 1801 aa16.88■□□□□ 0.29
COMMD4-215ENST00000566843 TBX3O15119 743 aa16.87■□□□□ 0.29
COMMD4-215ENST00000566843 SMNDC1O75940 238 aaKnown RBP eCLIP16.87■□□□□ 0.29
COMMD4-215ENST00000566843 PEX5P50542 639 aa16.87■□□□□ 0.29
COMMD4-215ENST00000566843 EN1Q05925 392 aaPredicted RBP16.87■□□□□ 0.29
COMMD4-215ENST00000566843 CCDC137Q6PK04 289 aaKnown RBP16.87■□□□□ 0.29
COMMD4-215ENST00000566843 SAMD1Q6SPF0 538 aaPredicted RBP16.87■□□□□ 0.29
COMMD4-215ENST00000566843 CCDC24Q8N4L8 307 aa16.87■□□□□ 0.29
COMMD4-215ENST00000566843 CRYGNQ8WXF5 182 aa16.87■□□□□ 0.29
COMMD4-215ENST00000566843 ANKRD27Q96NW4 1050 aa16.87■□□□□ 0.29
COMMD4-215ENST00000566843 UIMC1Q96RL1 719 aa16.87■□□□□ 0.29
COMMD4-215ENST00000566843 SETDB2Q96T68 719 aa16.87■□□□□ 0.29
COMMD4-215ENST00000566843 TAOK3Q9H2K8 898 aa16.87■□□□□ 0.29
COMMD4-215ENST00000566843 OLFML3Q9NRN5 406 aa16.87■□□□□ 0.29
COMMD4-215ENST00000566843 ZMYM2Q9UBW7 1377 aa16.87■□□□□ 0.29
COMMD4-215ENST00000566843 RSPH10B2B2RC85 870 aa16.87■□□□□ 0.29
COMMD4-215ENST00000566843 EIF3DO15371 548 aaKnown RBP eCLIP16.87■□□□□ 0.29
COMMD4-215ENST00000566843 RSPH10BP0C881 870 aa16.87■□□□□ 0.29
COMMD4-215ENST00000566843 AKR1B1P15121 316 aa16.87■□□□□ 0.29
COMMD4-215ENST00000566843 COILP38432 576 aaPredicted RBP16.87■□□□□ 0.29
COMMD4-215ENST00000566843 SKIV2L2P42285 1042 aaKnown RBP16.87■□□□□ 0.29
COMMD4-215ENST00000566843 MSH2P43246 934 aa16.87■□□□□ 0.29
COMMD4-215ENST00000566843 C11orf91Q3C1V1 193 aa16.87■□□□□ 0.29
COMMD4-215ENST00000566843 SPATA21Q7Z572 469 aa16.87■□□□□ 0.29
COMMD4-215ENST00000566843 PRCCQ92733 491 aaPredicted RBP16.87■□□□□ 0.29
COMMD4-215ENST00000566843 KRT35Q92764 455 aa16.87■□□□□ 0.29
COMMD4-215ENST00000566843 ANO3Q9BYT9 981 aa16.87■□□□□ 0.29
COMMD4-215ENST00000566843 SLC24A3Q9HC58 644 aa16.87■□□□□ 0.29
COMMD4-215ENST00000566843 ANKRD63C9JTQ0 380 aa16.86■□□□□ 0.29
COMMD4-215ENST00000566843 GCNT3O95395 438 aa16.86■□□□□ 0.29
COMMD4-215ENST00000566843 CCNB1P14635 433 aa16.86■□□□□ 0.29
COMMD4-215ENST00000566843 GAP43P17677 238 aa16.86■□□□□ 0.29
COMMD4-215ENST00000566843 CCNHP51946 323 aaPredicted RBP16.86■□□□□ 0.29
COMMD4-215ENST00000566843 CTTNQ14247 550 aaKnown RBP16.86■□□□□ 0.29
COMMD4-215ENST00000566843 CCDC38Q502W7 563 aa16.86■□□□□ 0.29
COMMD4-215ENST00000566843 GPATCH4Q5T3I0 446 aaKnown RBP16.86■□□□□ 0.29
COMMD4-215ENST00000566843 PALB2Q86YC2 1186 aa16.86■□□□□ 0.29
COMMD4-215ENST00000566843 MORC4Q8TE76 937 aa16.86■□□□□ 0.29
COMMD4-215ENST00000566843 INTS2Q9H0H0 1204 aaKnown RBP16.86■□□□□ 0.29
COMMD4-215ENST00000566843 CCDC113Q9H0I3 377 aa16.86■□□□□ 0.29
COMMD4-215ENST00000566843 ADAM22Q9P0K1 906 aa16.86■□□□□ 0.29
COMMD4-215ENST00000566843 GGT7Q9UJ14 662 aa16.86■□□□□ 0.29
COMMD4-215ENST00000566843 CORO1CQ9ULV4 474 aaPredicted RBP16.86■□□□□ 0.29
COMMD4-215ENST00000566843 GAKO14976 1311 aa16.86■□□□□ 0.29
COMMD4-215ENST00000566843 TMEM120BA0PK00 339 aa16.86■□□□□ 0.29
COMMD4-215ENST00000566843 USP17L10C9JJH3 530 aa16.86■□□□□ 0.29
COMMD4-215ENST00000566843 MEIS1O00470 390 aa16.86■□□□□ 0.29
COMMD4-215ENST00000566843 TTLL1O95922 423 aa16.86■□□□□ 0.29
COMMD4-215ENST00000566843 ADRA2BP18089 450 aa16.86■□□□□ 0.29
COMMD4-215ENST00000566843 PDE6BP35913 854 aa16.86■□□□□ 0.29
COMMD4-215ENST00000566843 KCNA1Q09470 495 aa16.86■□□□□ 0.29
COMMD4-215ENST00000566843 MKRN3Q13064 507 aaKnown RBP16.86■□□□□ 0.29
COMMD4-215ENST00000566843 SLC15A2Q16348 729 aa16.86■□□□□ 0.29
COMMD4-215ENST00000566843 RNF43Q68DV7 783 aa16.86■□□□□ 0.29
COMMD4-215ENST00000566843 NAIF1Q69YI7 327 aaPredicted RBP16.86■□□□□ 0.29
COMMD4-215ENST00000566843 ERICH1Q86X53 443 aa16.86■□□□□ 0.29
COMMD4-215ENST00000566843 NBPF5PQ86XG9 351 aaPredicted RBP16.86■□□□□ 0.29
COMMD4-215ENST00000566843 SPICE1Q8N0Z3 855 aa16.86■□□□□ 0.29
COMMD4-215ENST00000566843 C12orf50Q8NA57 414 aaPredicted RBP16.86■□□□□ 0.29
COMMD4-215ENST00000566843 ARMC2Q8NEN0 867 aa16.86■□□□□ 0.29
COMMD4-215ENST00000566843 DYDC1Q8WWB3 177 aa16.86■□□□□ 0.29
COMMD4-215ENST00000566843 ARHGEF2Q92974 986 aaKnown RBP16.86■□□□□ 0.29
COMMD4-215ENST00000566843 AGPAT1Q99943 283 aa16.86■□□□□ 0.29
COMMD4-215ENST00000566843 PASKQ96RG2 1323 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 A8MUI8 341 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 USP17L15C9J2P7 530 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 USP17L13C9JLJ4 530 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 USP17L11C9JVI0 530 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 USP17L18D6R9N7 530 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 USP17L22D6RA61 530 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 USP17L17D6RBQ6 530 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 USP17L19D6RCP7 530 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 USP17L20D6RJB6 530 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 MTA2O94776 668 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 CALRP27797 417 aaKnown RBP16.85■□□□□ 0.29
COMMD4-215ENST00000566843 ATP5DP30049 168 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 MARCKSL1P49006 195 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 CCDC15Q0P6D6 951 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 USP17L24Q0WX57 530 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 BLMHQ13867 455 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 SIX1Q15475 284 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms