RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 CCDC113Q9H0I3 377 aa22.36■■□□□ 1.17
RNF40-210ENST00000566811 MINDY3Q9H8M7 445 aa22.36■■□□□ 1.17
RNF40-210ENST00000566811 RGS18Q9NS28 235 aa22.36■■□□□ 1.17
RNF40-210ENST00000566811 SLC4A7Q9Y6M7 1214 aa22.36■■□□□ 1.17
RNF40-210ENST00000566811 ADGRA3Q8IWK6 1321 aa22.35■■□□□ 1.17
RNF40-210ENST00000566811 ZBBXA8MT70 800 aa22.35■■□□□ 1.17
RNF40-210ENST00000566811 ACKR2O00590 384 aa22.35■■□□□ 1.17
RNF40-210ENST00000566811 GTPBP6O43824 516 aaPredicted RBP22.35■■□□□ 1.17
RNF40-210ENST00000566811 PRKCBP05771 671 aa22.35■■□□□ 1.17
RNF40-210ENST00000566811 IDEP14735 1019 aa22.35■■□□□ 1.17
RNF40-210ENST00000566811 CACNB1Q02641 598 aaPredicted RBP22.35■■□□□ 1.17
RNF40-210ENST00000566811 STRN3Q13033 797 aa22.35■■□□□ 1.17
RNF40-210ENST00000566811 SNW1Q13573 536 aaKnown RBP22.35■■□□□ 1.17
RNF40-210ENST00000566811 SHHQ15465 462 aa22.35■■□□□ 1.17
RNF40-210ENST00000566811 STXBP4Q6ZWJ1 553 aa22.35■■□□□ 1.17
RNF40-210ENST00000566811 CCDC47Q96A33 483 aaKnown RBP22.35■■□□□ 1.17
RNF40-210ENST00000566811 GUCD1Q96NT3 240 aa22.35■■□□□ 1.17
RNF40-210ENST00000566811 OSBPL7Q9BZF2 842 aa22.35■■□□□ 1.17
RNF40-210ENST00000566811 ZHX3Q9H4I2 956 aa22.35■■□□□ 1.17
RNF40-210ENST00000566811 PANK4Q9NVE7 773 aa22.35■■□□□ 1.17
RNF40-210ENST00000566811 PIN4Q9Y237 131 aaKnown RBP22.35■■□□□ 1.17
RNF40-210ENST00000566811 K7ENM7 598 aa22.34■■□□□ 1.17
RNF40-210ENST00000566811 TSPAN1O60635 241 aa22.34■■□□□ 1.17
RNF40-210ENST00000566811 PRPF40AO75400 957 aaKnown RBP22.34■■□□□ 1.17
RNF40-210ENST00000566811 DSC3Q14574 896 aa22.34■■□□□ 1.17
RNF40-210ENST00000566811 AMHR2Q16671 573 aa22.34■■□□□ 1.17
RNF40-210ENST00000566811 C9orf50Q5SZB4 431 aa22.34■■□□□ 1.17
RNF40-210ENST00000566811 FAM109BQ6ICB4 259 aaPredicted RBP22.34■■□□□ 1.17
RNF40-210ENST00000566811 SLC24A5Q71RS6 500 aa22.34■■□□□ 1.17
RNF40-210ENST00000566811 TMEM161BQ8NDZ6 487 aa22.34■■□□□ 1.17
RNF40-210ENST00000566811 TMX1Q9H3N1 280 aa22.34■■□□□ 1.17
RNF40-210ENST00000566811 UNC80Q8N2C7 3258 aa22.33■■□□□ 1.17
RNF40-210ENST00000566811 SLC16A4O15374 487 aa22.33■■□□□ 1.17
RNF40-210ENST00000566811 AFMP43652 599 aa22.33■■□□□ 1.17
RNF40-210ENST00000566811 PRPF4BQ13523 1007 aaKnown RBP22.33■■□□□ 1.17
RNF40-210ENST00000566811 HERC4Q5GLZ8 1057 aaPredicted RBP22.33■■□□□ 1.17
RNF40-210ENST00000566811 HAUS6Q7Z4H7 955 aa22.33■■□□□ 1.17
RNF40-210ENST00000566811 SFR1Q86XK3 245 aa22.33■■□□□ 1.17
RNF40-210ENST00000566811 COL25A1Q9BXS0 654 aaPredicted RBP22.33■■□□□ 1.17
RNF40-210ENST00000566811 MRPL4Q9BYD3 311 aaKnown RBP22.33■■□□□ 1.17
RNF40-210ENST00000566811 ELAC1Q9H777 363 aaKnown RBP22.33■■□□□ 1.17
RNF40-210ENST00000566811 LAMA2P24043 3122 aaKnown RBP22.33■■□□□ 1.16
RNF40-210ENST00000566811 GBF1Q92538 1859 aa22.32■■□□□ 1.16
RNF40-210ENST00000566811 SFI1A8K8P3 1242 aa22.32■■□□□ 1.16
RNF40-210ENST00000566811 N4BP3O15049 544 aa22.32■■□□□ 1.16
RNF40-210ENST00000566811 STAG3L1P0CL83 205 aa22.32■■□□□ 1.16
RNF40-210ENST00000566811 SARSP49591 514 aaKnown RBP22.32■■□□□ 1.16
RNF40-210ENST00000566811 COASYQ13057 564 aa22.32■■□□□ 1.16
RNF40-210ENST00000566811 TWF2Q6IBS0 349 aaKnown RBP22.32■■□□□ 1.16
RNF40-210ENST00000566811 ZPBP2Q6X784 338 aa22.32■■□□□ 1.16
RNF40-210ENST00000566811 NPAS4Q8IUM7 802 aa22.32■■□□□ 1.16
RNF40-210ENST00000566811 STAMQ92783 540 aa22.32■■□□□ 1.16
RNF40-210ENST00000566811 FAM161BQ96MY7 647 aa22.32■■□□□ 1.16
RNF40-210ENST00000566811 FIZ1Q96SL8 496 aa22.32■■□□□ 1.16
RNF40-210ENST00000566811 ADAM2Q99965 735 aa22.32■■□□□ 1.16
RNF40-210ENST00000566811 ADPGKQ9BRR6 497 aa22.32■■□□□ 1.16
RNF40-210ENST00000566811 KIFC3Q9BVG8 833 aa22.32■■□□□ 1.16
RNF40-210ENST00000566811 GTPBP4Q9BZE4 634 aaKnown RBP22.32■■□□□ 1.16
RNF40-210ENST00000566811 MRPL44Q9H9J2 332 aaKnown RBP22.32■■□□□ 1.16
RNF40-210ENST00000566811 PCDHB13Q9Y5F0 798 aa22.32■■□□□ 1.16
RNF40-210ENST00000566811 UBE4BO95155 1302 aa22.31■■□□□ 1.16
RNF40-210ENST00000566811 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.31■■□□□ 1.16
RNF40-210ENST00000566811 ENPP3O14638 875 aa22.31■■□□□ 1.16
RNF40-210ENST00000566811 GADD45BO75293 160 aaPredicted RBP22.31■■□□□ 1.16
RNF40-210ENST00000566811 NR1I2O75469 434 aa22.31■■□□□ 1.16
RNF40-210ENST00000566811 CSDE1O75534 798 aaKnown RBP22.31■■□□□ 1.16
RNF40-210ENST00000566811 ATP2A2P16615 1042 aaKnown RBP22.31■■□□□ 1.16
RNF40-210ENST00000566811 FGFR4P22455 802 aa22.31■■□□□ 1.16
RNF40-210ENST00000566811 GTF2BQ00403 316 aa22.31■■□□□ 1.16
RNF40-210ENST00000566811 PSMD2Q13200 908 aa22.31■■□□□ 1.16
RNF40-210ENST00000566811 POSTNQ15063 836 aa22.31■■□□□ 1.16
RNF40-210ENST00000566811 TCTN1Q2MV58 587 aa22.31■■□□□ 1.16
RNF40-210ENST00000566811 TPRNQ4KMQ1 711 aa22.31■■□□□ 1.16
RNF40-210ENST00000566811 SLC27A1Q6PCB7 646 aa22.31■■□□□ 1.16
RNF40-210ENST00000566811 HACE1Q8IYU2 909 aa22.31■■□□□ 1.16
RNF40-210ENST00000566811 POLD4Q9HCU8 107 aa22.31■■□□□ 1.16
RNF40-210ENST00000566811 ZMYM2Q9UBW7 1377 aa22.3■■□□□ 1.16
RNF40-210ENST00000566811 A0A0U1RQF3 1178 aa22.3■■□□□ 1.16
RNF40-210ENST00000566811 A0A1B0GUA9 196 aa22.3■■□□□ 1.16
RNF40-210ENST00000566811 C9IYK1 514 aa22.3■■□□□ 1.16
RNF40-210ENST00000566811 EIF3DO15371 548 aaKnown RBP eCLIP22.3■■□□□ 1.16
RNF40-210ENST00000566811 HOXA2O43364 376 aa22.3■■□□□ 1.16
RNF40-210ENST00000566811 ARF4P18085 180 aaPredicted RBP22.3■■□□□ 1.16
RNF40-210ENST00000566811 HOXA11P31270 313 aaPredicted RBP22.3■■□□□ 1.16
RNF40-210ENST00000566811 EHHADHQ08426 723 aa22.3■■□□□ 1.16
RNF40-210ENST00000566811 CUL4BQ13620 913 aa22.3■■□□□ 1.16
RNF40-210ENST00000566811 FAM26FQ5R3K3 315 aa22.3■■□□□ 1.16
RNF40-210ENST00000566811 ZNF720Q7Z2F6 126 aa22.3■■□□□ 1.16
RNF40-210ENST00000566811 MAP4K3Q8IVH8 894 aa22.3■■□□□ 1.16
RNF40-210ENST00000566811 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.3■■□□□ 1.16
RNF40-210ENST00000566811 MYOCDQ8IZQ8 938 aa22.3■■□□□ 1.16
RNF40-210ENST00000566811 LINC01599Q8WXQ3 324 aa22.3■■□□□ 1.16
RNF40-210ENST00000566811 TOP1MTQ969P6 601 aa22.3■■□□□ 1.16
RNF40-210ENST00000566811 EXOC1Q9NV70 894 aa22.3■■□□□ 1.16
RNF40-210ENST00000566811 RMND1Q9NWS8 449 aa22.3■■□□□ 1.16
RNF40-210ENST00000566811 TMEM161AQ9NX61 479 aa22.3■■□□□ 1.16
RNF40-210ENST00000566811 CXXC1Q9P0U4 656 aaPredicted RBP22.3■■□□□ 1.16
RNF40-210ENST00000566811 TBX20Q9UMR3 447 aa22.3■■□□□ 1.16
RNF40-210ENST00000566811 EXOC7Q9UPT5 735 aa22.3■■□□□ 1.16
RNF40-210ENST00000566811 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms