RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 RNASELQ05823 741 aaKnown RBP11.25□□□□□ -0.61
GTF3C1-206ENST00000566779 TFDP1Q14186 410 aa11.25□□□□□ -0.61
GTF3C1-206ENST00000566779 PLPP4Q5VZY2 271 aa11.25□□□□□ -0.61
GTF3C1-206ENST00000566779 PTCRAQ6ISU1 281 aaPredicted RBP11.25□□□□□ -0.61
GTF3C1-206ENST00000566779 ADGRD2Q7Z7M1 963 aa11.25□□□□□ -0.61
GTF3C1-206ENST00000566779 FERMT3Q86UX7 667 aa11.25□□□□□ -0.61
GTF3C1-206ENST00000566779 EXOC8Q8IYI6 725 aa11.25□□□□□ -0.61
GTF3C1-206ENST00000566779 CRIPAKQ8N1N5 446 aa11.25□□□□□ -0.61
GTF3C1-206ENST00000566779 ZNF710Q8N1W2 664 aa11.25□□□□□ -0.61
GTF3C1-206ENST00000566779 ASAP3Q8TDY4 903 aa11.25□□□□□ -0.61
GTF3C1-206ENST00000566779 PPP2R3CQ969Q6 453 aa11.25□□□□□ -0.61
GTF3C1-206ENST00000566779 ZNF558Q96NG5 402 aa11.25□□□□□ -0.61
GTF3C1-206ENST00000566779 MTMR9Q96QG7 549 aa11.25□□□□□ -0.61
GTF3C1-206ENST00000566779 LMAN2LQ9H0V9 348 aa11.25□□□□□ -0.61
GTF3C1-206ENST00000566779 DHX33Q9H6R0 707 aaKnown RBP11.25□□□□□ -0.61
GTF3C1-206ENST00000566779 MINDY3Q9H8M7 445 aa11.25□□□□□ -0.61
GTF3C1-206ENST00000566779 ENTPD7Q9NQZ7 604 aa11.25□□□□□ -0.61
GTF3C1-206ENST00000566779 SMC3Q9UQE7 1217 aa11.25□□□□□ -0.61
GTF3C1-206ENST00000566779 ARHGEF35A5YM69 484 aa11.24□□□□□ -0.61
GTF3C1-206ENST00000566779 LRRIQ4A6NIV6 560 aa11.24□□□□□ -0.61
GTF3C1-206ENST00000566779 LINC01565O15544 149 aa11.24□□□□□ -0.61
GTF3C1-206ENST00000566779 FGF18O76093 207 aa11.24□□□□□ -0.61
GTF3C1-206ENST00000566779 BMP1P13497 986 aa11.24□□□□□ -0.61
GTF3C1-206ENST00000566779 HOXB3P14651 431 aaPredicted RBP11.24□□□□□ -0.61
GTF3C1-206ENST00000566779 IL9P15248 144 aa11.24□□□□□ -0.61
GTF3C1-206ENST00000566779 ATF7P17544 494 aaPredicted RBP11.24□□□□□ -0.61
GTF3C1-206ENST00000566779 CDC42EP1Q00587 391 aa11.24□□□□□ -0.61
GTF3C1-206ENST00000566779 HYAL1Q12794 435 aa11.24□□□□□ -0.61
GTF3C1-206ENST00000566779 SPPL3Q8TCT6 385 aa11.24□□□□□ -0.61
GTF3C1-206ENST00000566779 SNX29Q8TEQ0 813 aa11.24□□□□□ -0.61
GTF3C1-206ENST00000566779 KHSRPQ92945 711 aaKnown RBP eCLIP11.24□□□□□ -0.61
GTF3C1-206ENST00000566779 P2RX5Q93086 422 aa11.24□□□□□ -0.61
GTF3C1-206ENST00000566779 CPB2Q96IY4 423 aa11.24□□□□□ -0.61
GTF3C1-206ENST00000566779 TBC1D32Q96NH3 1257 aa11.24□□□□□ -0.61
GTF3C1-206ENST00000566779 CASD1Q96PB1 797 aa11.24□□□□□ -0.61
GTF3C1-206ENST00000566779 ADAM33Q9BZ11 813 aa11.24□□□□□ -0.61
GTF3C1-206ENST00000566779 ELAC1Q9H777 363 aaKnown RBP11.24□□□□□ -0.61
GTF3C1-206ENST00000566779 IFT122Q9HBG6 1241 aa11.24□□□□□ -0.61
GTF3C1-206ENST00000566779 GPRC5CQ9NQ84 441 aa11.24□□□□□ -0.61
GTF3C1-206ENST00000566779 XPNPEP1Q9NQW7 623 aa11.24□□□□□ -0.61
GTF3C1-206ENST00000566779 TLR9Q9NR96 1032 aa11.24□□□□□ -0.61
GTF3C1-206ENST00000566779 AGPAT5Q9NUQ2 364 aa11.24□□□□□ -0.61
GTF3C1-206ENST00000566779 FAM105AQ9NUU6 356 aa11.24□□□□□ -0.61
GTF3C1-206ENST00000566779 RNF19AQ9NV58 838 aa11.24□□□□□ -0.61
GTF3C1-206ENST00000566779 PCDHB6Q9Y5E3 794 aa11.24□□□□□ -0.61
GTF3C1-206ENST00000566779 A0A0U1RQF3 1178 aa11.23□□□□□ -0.61
GTF3C1-206ENST00000566779 MEIS3P2A8K0S8 358 aa11.23□□□□□ -0.61
GTF3C1-206ENST00000566779 NT5C1B-RDH14C9J2C7 533 aa11.23□□□□□ -0.61
GTF3C1-206ENST00000566779 PER2O15055 1255 aa11.23□□□□□ -0.61
GTF3C1-206ENST00000566779 GAS2O43903 313 aaKnown RBP11.23□□□□□ -0.61
GTF3C1-206ENST00000566779 DGAT1O75907 488 aa11.23□□□□□ -0.61
GTF3C1-206ENST00000566779 RARRES1P49788 294 aa11.23□□□□□ -0.61
GTF3C1-206ENST00000566779 RAB27AP51159 221 aa11.23□□□□□ -0.61
GTF3C1-206ENST00000566779 CAPSQ13938 189 aa11.23□□□□□ -0.61
GTF3C1-206ENST00000566779 ARSIQ5FYB1 569 aa11.23□□□□□ -0.61
GTF3C1-206ENST00000566779 HAUS3Q68CZ6 603 aa11.23□□□□□ -0.61
GTF3C1-206ENST00000566779 LLGL2Q6P1M3 1020 aa11.23□□□□□ -0.61
GTF3C1-206ENST00000566779 KCNT2Q6UVM3 1135 aa11.23□□□□□ -0.61
GTF3C1-206ENST00000566779 GLB1LQ6UWU2 654 aa11.23□□□□□ -0.61
GTF3C1-206ENST00000566779 LRRC55Q6ZSA7 311 aa11.23□□□□□ -0.61
GTF3C1-206ENST00000566779 SRGAP1Q7Z6B7 1085 aa11.23□□□□□ -0.61
GTF3C1-206ENST00000566779 CDR2LQ86X02 465 aaPredicted RBP11.23□□□□□ -0.61
GTF3C1-206ENST00000566779 CATSPER3Q86XQ3 398 aa11.23□□□□□ -0.61
GTF3C1-206ENST00000566779 PABPC5Q96DU9 382 aaKnown RBP11.23□□□□□ -0.61
GTF3C1-206ENST00000566779 HSD17B14Q9BPX1 270 aa11.23□□□□□ -0.61
GTF3C1-206ENST00000566779 MRPL9Q9BYD2 267 aaKnown RBP11.23□□□□□ -0.61
GTF3C1-206ENST00000566779 CWH43Q9H720 699 aa11.23□□□□□ -0.61
GTF3C1-206ENST00000566779 ANKEF1Q9NU02 776 aa11.23□□□□□ -0.61
GTF3C1-206ENST00000566779 LRWD1Q9UFC0 647 aa11.23□□□□□ -0.61
GTF3C1-206ENST00000566779 PPME1Q9Y570 386 aa11.23□□□□□ -0.61
GTF3C1-206ENST00000566779 PCDHB2Q9Y5E7 798 aa11.23□□□□□ -0.61
GTF3C1-206ENST00000566779 PP2D1A8MPX8 630 aa11.22□□□□□ -0.61
GTF3C1-206ENST00000566779 CITO14578 2027 aa11.22□□□□□ -0.61
GTF3C1-206ENST00000566779 TBX10O75333 385 aa11.22□□□□□ -0.61
GTF3C1-206ENST00000566779 SPATA31C1P0DKV0 1188 aa11.22□□□□□ -0.61
GTF3C1-206ENST00000566779 SKIP12755 728 aa11.22□□□□□ -0.61
GTF3C1-206ENST00000566779 FAM189BP81408 668 aa11.22□□□□□ -0.61
GTF3C1-206ENST00000566779 RBM10P98175 930 aaKnown RBP11.22□□□□□ -0.61
GTF3C1-206ENST00000566779 CAMK1Q14012 370 aa11.22□□□□□ -0.61
GTF3C1-206ENST00000566779 MXD4Q14582 209 aaPredicted RBP11.22□□□□□ -0.61
GTF3C1-206ENST00000566779 LEXMQ3ZCV2 418 aa11.22□□□□□ -0.61
GTF3C1-206ENST00000566779 NAALADL2Q58DX5 795 aa11.22□□□□□ -0.61
GTF3C1-206ENST00000566779 ZNF598Q86UK7 904 aaKnown RBP11.22□□□□□ -0.61
GTF3C1-206ENST00000566779 URGCPQ8TCY9 931 aa11.22□□□□□ -0.61
GTF3C1-206ENST00000566779 FAM193BQ96PV7 902 aaPredicted RBP11.22□□□□□ -0.61
GTF3C1-206ENST00000566779 TCF25Q9BQ70 676 aa11.22□□□□□ -0.61
GTF3C1-206ENST00000566779 APOL5Q9BWW9 433 aa11.22□□□□□ -0.61
GTF3C1-206ENST00000566779 TRIM6Q9C030 488 aaPredicted RBP11.22□□□□□ -0.61
GTF3C1-206ENST00000566779 TLE6Q9H808 572 aa11.22□□□□□ -0.61
GTF3C1-206ENST00000566779 POLD4Q9HCU8 107 aa11.22□□□□□ -0.61
GTF3C1-206ENST00000566779 TUFT1Q9NNX1 390 aa11.22□□□□□ -0.61
GTF3C1-206ENST00000566779 CHST12Q9NRB3 414 aa11.22□□□□□ -0.61
GTF3C1-206ENST00000566779 SPG21Q9NZD8 308 aa11.22□□□□□ -0.61
GTF3C1-206ENST00000566779 PUF60Q9UHX1 559 aaKnown RBP11.22□□□□□ -0.61
GTF3C1-206ENST00000566779 BARX2Q9UMQ3 279 aaPredicted RBP11.22□□□□□ -0.61
GTF3C1-206ENST00000566779 VPS37CA5D8V6 355 aaPredicted RBP11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 ASAP2O43150 1006 aa11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 B4GALT5O43286 388 aa11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 TSPAN1O60635 241 aa11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 LYPLA2O95372 231 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms