RNA–Protein interactions for RNA: ENST00000566561.1

KLHDC4-216, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-216ENST00000566561 POLR3CQ9BUI4 534 aaPredicted RBP13.75□□□□□ -0.21
KLHDC4-216ENST00000566561 POLR3FQ9H1D9 316 aaPredicted RBP13.75□□□□□ -0.21
KLHDC4-216ENST00000566561 ENTPD7Q9NQZ7 604 aa13.75□□□□□ -0.21
KLHDC4-216ENST00000566561 MUTYHQ9UIF7 546 aa13.75□□□□□ -0.21
KLHDC4-216ENST00000566561 LZTS1Q9Y250 596 aa13.75□□□□□ -0.21
KLHDC4-216ENST00000566561 PCDHB2Q9Y5E7 798 aa13.75□□□□□ -0.21
KLHDC4-216ENST00000566561 MEIS3P2A8K0S8 358 aa13.74□□□□□ -0.21
KLHDC4-216ENST00000566561 NT5C1B-RDH14C9J2C7 533 aa13.74□□□□□ -0.21
KLHDC4-216ENST00000566561 PER2O15055 1255 aa13.74□□□□□ -0.21
KLHDC4-216ENST00000566561 MBTPS2O43462 519 aa13.74□□□□□ -0.21
KLHDC4-216ENST00000566561 TBX10O75333 385 aa13.74□□□□□ -0.21
KLHDC4-216ENST00000566561 CD2BP2O95400 341 aaKnown RBP13.74□□□□□ -0.21
KLHDC4-216ENST00000566561 RPA1P27694 616 aa13.74□□□□□ -0.21
KLHDC4-216ENST00000566561 HOXA11P31270 313 aaPredicted RBP13.74□□□□□ -0.21
KLHDC4-216ENST00000566561 CA8P35219 290 aa13.74□□□□□ -0.21
KLHDC4-216ENST00000566561 ARL2P36404 184 aa13.74□□□□□ -0.21
KLHDC4-216ENST00000566561 CCT6AP40227 531 aaKnown RBP13.74□□□□□ -0.21
KLHDC4-216ENST00000566561 MCM2P49736 904 aa13.74□□□□□ -0.21
KLHDC4-216ENST00000566561 BCAR1P56945 870 aa13.74□□□□□ -0.21
KLHDC4-216ENST00000566561 PTENP60484 403 aa13.74□□□□□ -0.21
KLHDC4-216ENST00000566561 POU5F1BQ06416 359 aa13.74□□□□□ -0.21
KLHDC4-216ENST00000566561 CAPSQ13938 189 aa13.74□□□□□ -0.21
KLHDC4-216ENST00000566561 PCBP1Q15365 356 aaKnown RBP eCLIP13.74□□□□□ -0.21
KLHDC4-216ENST00000566561 NOMO2Q5JPE7 1267 aa13.74□□□□□ -0.21
KLHDC4-216ENST00000566561 PLPP4Q5VZY2 271 aa13.74□□□□□ -0.21
KLHDC4-216ENST00000566561 HAUS3Q68CZ6 603 aa13.74□□□□□ -0.21
KLHDC4-216ENST00000566561 POTEGQ6S5H5 508 aa13.74□□□□□ -0.21
KLHDC4-216ENST00000566561 TMC7Q7Z402 723 aa13.74□□□□□ -0.21
KLHDC4-216ENST00000566561 SLC39A11Q8N1S5 342 aa13.74□□□□□ -0.21
KLHDC4-216ENST00000566561 EFHBQ8N7U6 833 aa13.74□□□□□ -0.21
KLHDC4-216ENST00000566561 URGCPQ8TCY9 931 aa13.74□□□□□ -0.21
KLHDC4-216ENST00000566561 ASAP3Q8TDY4 903 aa13.74□□□□□ -0.21
KLHDC4-216ENST00000566561 SNX27Q96L92 541 aa13.74□□□□□ -0.21
KLHDC4-216ENST00000566561 TCF25Q9BQ70 676 aa13.74□□□□□ -0.21
KLHDC4-216ENST00000566561 GBP3Q9H0R5 595 aa13.74□□□□□ -0.21
KLHDC4-216ENST00000566561 LRWD1Q9UFC0 647 aa13.74□□□□□ -0.21
KLHDC4-216ENST00000566561 CD207Q9UJ71 328 aa13.74□□□□□ -0.21
KLHDC4-216ENST00000566561 DBR1Q9UK59 544 aaKnown RBP13.74□□□□□ -0.21
KLHDC4-216ENST00000566561 PCDHB6Q9Y5E3 794 aa13.74□□□□□ -0.21
KLHDC4-216ENST00000566561 ARHGEF35A5YM69 484 aa13.73□□□□□ -0.21
KLHDC4-216ENST00000566561 LRRIQ4A6NIV6 560 aa13.73□□□□□ -0.21
KLHDC4-216ENST00000566561 H3BQV1 296 aa13.73□□□□□ -0.21
KLHDC4-216ENST00000566561 TSPAN1O60635 241 aa13.73□□□□□ -0.21
KLHDC4-216ENST00000566561 OFD1O75665 1012 aa13.73□□□□□ -0.21
KLHDC4-216ENST00000566561 GLRA2P23416 452 aa13.73□□□□□ -0.21
KLHDC4-216ENST00000566561 GJB2P29033 226 aa13.73□□□□□ -0.21
KLHDC4-216ENST00000566561 AXLP30530 894 aa13.73□□□□□ -0.21
KLHDC4-216ENST00000566561 TOB1P50616 345 aaPredicted RBP13.73□□□□□ -0.21
KLHDC4-216ENST00000566561 FXR2P51116 673 aaKnown RBP eCLIP13.73□□□□□ -0.21
KLHDC4-216ENST00000566561 PTPN5P54829 565 aa13.73□□□□□ -0.21
KLHDC4-216ENST00000566561 PTGDRQ13258 359 aa13.73□□□□□ -0.21
KLHDC4-216ENST00000566561 NOTUMQ6P988 496 aa13.73□□□□□ -0.21
KLHDC4-216ENST00000566561 AGMOQ6ZNB7 445 aa13.73□□□□□ -0.21
KLHDC4-216ENST00000566561 MRPL10Q7Z7H8 261 aaKnown RBP13.73□□□□□ -0.21
KLHDC4-216ENST00000566561 IFNLR1Q8IU57 520 aaPredicted RBP13.73□□□□□ -0.21
KLHDC4-216ENST00000566561 C4orf32Q8N8J7 132 aa13.73□□□□□ -0.21
KLHDC4-216ENST00000566561 CNNM3Q8NE01 707 aa13.73□□□□□ -0.21
KLHDC4-216ENST00000566561 MCPH1Q8NEM0 835 aa13.73□□□□□ -0.21
KLHDC4-216ENST00000566561 CPB2Q96IY4 423 aa13.73□□□□□ -0.21
KLHDC4-216ENST00000566561 TBC1D32Q96NH3 1257 aa13.73□□□□□ -0.21
KLHDC4-216ENST00000566561 PRRX2Q99811 253 aa13.73□□□□□ -0.21
KLHDC4-216ENST00000566561 RAB34Q9BZG1 259 aa13.73□□□□□ -0.21
KLHDC4-216ENST00000566561 RSAD1Q9HA92 442 aa13.73□□□□□ -0.21
KLHDC4-216ENST00000566561 NGRNQ9NPE2 291 aaKnown RBP13.73□□□□□ -0.21
KLHDC4-216ENST00000566561 GPRC5CQ9NQ84 441 aa13.73□□□□□ -0.21
KLHDC4-216ENST00000566561 TBC1D13Q9NVG8 400 aa13.73□□□□□ -0.21
KLHDC4-216ENST00000566561 SMC3Q9UQE7 1217 aa13.73□□□□□ -0.21
KLHDC4-216ENST00000566561 PLXNA4Q9HCM2 1894 aa13.72□□□□□ -0.21
KLHDC4-216ENST00000566561 CNTNAP2Q9UHC6 1331 aa13.72□□□□□ -0.21
KLHDC4-216ENST00000566561 FSD2A1L4K1 749 aa13.72□□□□□ -0.21
KLHDC4-216ENST00000566561 FSCN2O14926 492 aa13.72□□□□□ -0.21
KLHDC4-216ENST00000566561 ITGA4P13612 1032 aa13.72□□□□□ -0.21
KLHDC4-216ENST00000566561 MUTP22033 750 aa13.72□□□□□ -0.21
KLHDC4-216ENST00000566561 MBTD1Q05BQ5 628 aa13.72□□□□□ -0.21
KLHDC4-216ENST00000566561 PDIA5Q14554 519 aa13.72□□□□□ -0.21
KLHDC4-216ENST00000566561 BMS1Q14692 1282 aaKnown RBP13.72□□□□□ -0.21
KLHDC4-216ENST00000566561 DUSP6Q16828 381 aa13.72□□□□□ -0.21
KLHDC4-216ENST00000566561 UBXN11Q5T124 520 aa13.72□□□□□ -0.21
KLHDC4-216ENST00000566561 PADI6Q6TGC4 694 aa13.72□□□□□ -0.21
KLHDC4-216ENST00000566561 RNF135Q8IUD6 432 aa13.72□□□□□ -0.21
KLHDC4-216ENST00000566561 SUGP1Q8IWZ8 645 aaKnown RBP13.72□□□□□ -0.21
KLHDC4-216ENST00000566561 TMEM169Q96HH4 297 aa13.72□□□□□ -0.21
KLHDC4-216ENST00000566561 FAM193BQ96PV7 902 aaPredicted RBP13.72□□□□□ -0.21
KLHDC4-216ENST00000566561 CDCA3Q99618 268 aaPredicted RBP13.72□□□□□ -0.21
KLHDC4-216ENST00000566561 EIF2AQ9BY44 585 aaKnown RBP13.72□□□□□ -0.21
KLHDC4-216ENST00000566561 TRIM6Q9C030 488 aaPredicted RBP13.72□□□□□ -0.21
KLHDC4-216ENST00000566561 NRDE2Q9H7Z3 1164 aa13.72□□□□□ -0.21
KLHDC4-216ENST00000566561 KANSL3Q9P2N6 904 aa13.72□□□□□ -0.21
KLHDC4-216ENST00000566561 BARX2Q9UMQ3 279 aaPredicted RBP13.72□□□□□ -0.21
KLHDC4-216ENST00000566561 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.72□□□□□ -0.21
KLHDC4-216ENST00000566561 CARNS1A5YM72 827 aa13.71□□□□□ -0.21
KLHDC4-216ENST00000566561 LAD1O00515 517 aa13.71□□□□□ -0.21
KLHDC4-216ENST00000566561 SRGAP2BP0DMP2 458 aa13.71□□□□□ -0.21
KLHDC4-216ENST00000566561 ARF4P18085 180 aaPredicted RBP13.71□□□□□ -0.21
KLHDC4-216ENST00000566561 NCLP19338 710 aaKnown RBP13.71□□□□□ -0.21
KLHDC4-216ENST00000566561 SMC1AQ14683 1233 aaKnown RBP13.71□□□□□ -0.21
KLHDC4-216ENST00000566561 RILPL1Q5EBL4 403 aa13.71□□□□□ -0.21
KLHDC4-216ENST00000566561 ZBTB8OSQ8IWT0 167 aa13.71□□□□□ -0.21
KLHDC4-216ENST00000566561 SMG8Q8ND04 991 aaKnown RBP13.71□□□□□ -0.21
KLHDC4-216ENST00000566561 SNX29Q8TEQ0 813 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms