RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 DPP7Q9UHL4 492 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 LIMCH1Q9UPQ0 1083 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 STXBP5LQ9Y2K9 1186 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 SYNGAP1Q96PV0 1343 aa3.9□□□□□ -1.79
HERPUD1-211ENST00000566550 SHISA3A0PJX4 238 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 NPIPB6E9PJ23 425 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 K7ENM7 598 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 APOL1O14791 398 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 WNT9AO14904 365 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 FFAR2O15552 330 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 FKTNO75072 461 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 SKAP2O75563 359 aaPredicted RBP3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 BAIAP3O94812 1187 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 FTLP02792 175 aaPredicted RBP3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 AMY2AP04746 511 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 MYF5P13349 255 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 MTHFD2P13995 350 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 TSHRP16473 764 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 AMY2BP19961 511 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 PDIA3P30101 505 aaKnown RBP3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 CD96P40200 585 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 NOP2P46087 812 aaKnown RBP3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 AGFG1P52594 562 aaKnown RBP3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 LACTBP83111 547 aaPredicted RBP3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 ZBED6P86452 979 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 ZP2Q05996 745 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 ZNF543Q08ER8 600 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 PRKG2Q13237 762 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 CDK5R2Q13319 367 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 IKZF1Q13422 519 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 LSAMPQ13449 338 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 GPR19Q15760 415 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 C3orf36Q3SXR2 165 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 SLC45A4Q5BKX6 768 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 FAM133BQ5BKY9 247 aaKnown RBP3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 TTLL5Q6EMB2 1281 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 IQCEQ6IPM2 695 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 PRR23BQ6ZRT6 265 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 NOSTRINQ8IVI9 506 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 ZZZ3Q8IYH5 903 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 PRR18Q8N4B5 295 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 MSL3Q8N5Y2 521 aaKnown RBP3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 C7orf31Q8N865 590 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 NAT16Q8N8M0 369 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 DTWD2Q8NBA8 298 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 UCMAQ8WVF2 138 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 TRAPPC12Q8WVT3 735 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 NRG4Q8WWG1 115 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 AUTS2Q8WXX7 1259 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 USP13Q92995 863 aaPredicted RBP3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 MUL1Q969V5 352 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 TMEM41AQ96HV5 264 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 RMDN3Q96TC7 470 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 NUDT16L1Q9BRJ7 211 aaKnown RBP3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 TTLL2Q9BWV7 592 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 SORBS1Q9BX66 1292 aaKnown RBP3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 ACE2Q9BYF1 805 aaPredicted RBP3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 C22orf23Q9BZE7 217 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 CD244Q9BZW8 370 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 MAGEH1Q9H213 219 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 POFUT1Q9H488 388 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 C14orf93Q9H972 538 aaKnown RBP3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 ZNF287Q9HBT7 754 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 DCP1AQ9NPI6 582 aaPredicted RBP3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 ACSS2Q9NR19 701 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 IRAK4Q9NWZ3 460 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 GGA3Q9NZ52 723 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 ITGB1BP2Q9UKP3 347 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 PCOLCE2Q9UKZ9 415 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 OGDHLQ9ULD0 1010 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 JAG2Q9Y219 1238 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 TMX2Q9Y320 296 aa3.89□□□□□ -1.79
HERPUD1-211ENST00000566550 SYNDIG1LA6NDD5 238 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 TCAF2A6NFQ2 919 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 TRIM38O00635 465 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 MAN2B1O00754 1011 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 NKRFO15226 690 aaKnown RBP eCLIP3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 IRAK2O43187 625 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 TMCC2O75069 709 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 TMEM127O75204 238 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 CNOT4O95628 575 aaKnown RBP3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 TBX18O95935 607 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 RPN1P04843 607 aaKnown RBP3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 PARP1P09874 1014 aaKnown RBP3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 ATP1A3P13637 1013 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 BRAFP15056 766 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 FPR2P25090 351 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 ELF1P32519 619 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 HSPA7P48741 367 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 ALDH9A1P49189 494 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 MANFP55145 182 aaKnown RBP3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 RAB1AP62820 205 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 RPL11P62913 178 aaKnown RBP3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 DUSP4Q13115 394 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 IL10RAQ13651 578 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 TESK1Q15569 626 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 MPEG1Q2M385 716 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 MUM1Q2TAK8 710 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 PITRM1Q5JRX3 1037 aa3.88□□□□□ -1.79
HERPUD1-211ENST00000566550 WDR45BQ5MNZ6 344 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms