RNA–Protein interactions for RNA: ENST00000566087.5

NSMCE1-211, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-211ENST00000566087 ATP2C1P98194 919 aaPredicted RBP11.84□□□□□ -0.51
NSMCE1-211ENST00000566087 LAMTOR4Q0VGL1 99 aa11.84□□□□□ -0.51
NSMCE1-211ENST00000566087 PPP2R5AQ15172 486 aa11.84□□□□□ -0.51
NSMCE1-211ENST00000566087 SKOR2Q2VWA4 1001 aaPredicted RBP11.84□□□□□ -0.51
NSMCE1-211ENST00000566087 PAN2Q504Q3 1202 aaKnown RBP11.84□□□□□ -0.51
NSMCE1-211ENST00000566087 FAM173BQ6P4H8 233 aa11.84□□□□□ -0.51
NSMCE1-211ENST00000566087 CATSPER4Q7RTX7 472 aa11.84□□□□□ -0.51
NSMCE1-211ENST00000566087 ABI1Q8IZP0 508 aa11.84□□□□□ -0.51
NSMCE1-211ENST00000566087 TMEM87AQ8NBN3 555 aa11.84□□□□□ -0.51
NSMCE1-211ENST00000566087 PIGOQ8TEQ8 1089 aa11.84□□□□□ -0.51
NSMCE1-211ENST00000566087 LINC01599Q8WXQ3 324 aa11.84□□□□□ -0.51
NSMCE1-211ENST00000566087 CLP1Q92989 425 aaKnown RBP11.84□□□□□ -0.51
NSMCE1-211ENST00000566087 PBXIP1Q96AQ6 731 aa11.84□□□□□ -0.51
NSMCE1-211ENST00000566087 ZNF689Q96CS4 500 aaPredicted RBP11.84□□□□□ -0.51
NSMCE1-211ENST00000566087 NLRP4Q96MN2 994 aa11.84□□□□□ -0.51
NSMCE1-211ENST00000566087 CEP89Q96ST8 783 aa11.84□□□□□ -0.51
NSMCE1-211ENST00000566087 SH2D3AQ9BRG2 576 aa11.84□□□□□ -0.51
NSMCE1-211ENST00000566087 LMBRD1Q9NUN5 540 aa11.84□□□□□ -0.51
NSMCE1-211ENST00000566087 TMEM161AQ9NX61 479 aa11.84□□□□□ -0.51
NSMCE1-211ENST00000566087 PLAGL2Q9UPG8 496 aa11.84□□□□□ -0.51
NSMCE1-211ENST00000566087 PCDHGC5Q9Y5F6 944 aa11.84□□□□□ -0.51
NSMCE1-211ENST00000566087 MRPL42Q9Y6G3 142 aaKnown RBP11.84□□□□□ -0.51
NSMCE1-211ENST00000566087 KMT2EQ8IZD2 1858 aa11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 A0A087WZ62 844 aa11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 TMEM150BA6NC51 233 aa11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 WNT7AO00755 349 aa11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 DGKIO75912 1065 aa11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 ERLIN2O94905 339 aa11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 IBSPP21815 317 aaPredicted RBP11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 AXLP30530 894 aa11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 UBA7P41226 1012 aa11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 RAB27AP51159 221 aa11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 FAM189BP81408 668 aa11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 NAALADL2Q58DX5 795 aa11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 TRIM67Q6ZTA4 783 aa11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 RBM23Q86U06 439 aaKnown RBP11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 RTN4RL1Q86UN2 441 aaPredicted RBP11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 FAM228AQ86W67 206 aa11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 CMTR2Q8IYT2 770 aaKnown RBP11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 HACE1Q8IYU2 909 aa11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 CNNM3Q8NE01 707 aa11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 SNX29Q8TEQ0 813 aa11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 TMEM143Q96AN5 459 aa11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 PGBD4Q96DM1 585 aa11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 CALML4Q96GE6 196 aa11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 CHAMP1Q96JM3 812 aa11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 MSLNLQ96KJ4 702 aa11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 IFT74Q96LB3 600 aa11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 PPP1R16BQ96T49 567 aa11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 FDXACB1Q9BRP7 624 aaPredicted RBP11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 TIPINQ9BVW5 301 aa11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 PLVAPQ9BX97 442 aa11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 FAM86C1Q9NVL1 165 aa11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 CLEC1BQ9P126 229 aa11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 WRAP73Q9P2S5 460 aaPredicted RBP11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 TFIP11Q9UBB9 837 aaKnown RBP11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 BARX2Q9UMQ3 279 aaPredicted RBP11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 KIAA1024Q9UPX6 916 aa11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 PHLPP2Q6ZVD8 1323 aa11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 PLXNA4Q9HCM2 1894 aa11.83□□□□□ -0.52
NSMCE1-211ENST00000566087 A0A0U1RQF3 1178 aa11.82□□□□□ -0.52
NSMCE1-211ENST00000566087 VWA3AA6NCI4 1184 aa11.82□□□□□ -0.52
NSMCE1-211ENST00000566087 ZBTB39O15060 712 aa11.82□□□□□ -0.52
NSMCE1-211ENST00000566087 MED24O75448 989 aa11.82□□□□□ -0.52
NSMCE1-211ENST00000566087 ITGB1P05556 798 aa11.82□□□□□ -0.52
NSMCE1-211ENST00000566087 LONP1P36776 959 aaKnown RBP11.82□□□□□ -0.52
NSMCE1-211ENST00000566087 NRIP1P48552 1158 aa11.82□□□□□ -0.52
NSMCE1-211ENST00000566087 GATMP50440 423 aa11.82□□□□□ -0.52
NSMCE1-211ENST00000566087 RBM10P98175 930 aaKnown RBP11.82□□□□□ -0.52
NSMCE1-211ENST00000566087 TCF15Q12870 199 aa11.82□□□□□ -0.52
NSMCE1-211ENST00000566087 TWF2Q6IBS0 349 aaKnown RBP11.82□□□□□ -0.52
NSMCE1-211ENST00000566087 PADI6Q6TGC4 694 aa11.82□□□□□ -0.52
NSMCE1-211ENST00000566087 APBB1IPQ7Z5R6 666 aaPredicted RBP11.82□□□□□ -0.52
NSMCE1-211ENST00000566087 ZBTB8OSQ8IWT0 167 aa11.82□□□□□ -0.52
NSMCE1-211ENST00000566087 KLHL23Q8NBE8 558 aa11.82□□□□□ -0.52
NSMCE1-211ENST00000566087 RNF149Q8NC42 400 aa11.82□□□□□ -0.52
NSMCE1-211ENST00000566087 RASSF8Q8NHQ8 419 aa11.82□□□□□ -0.52
NSMCE1-211ENST00000566087 SPPL3Q8TCT6 385 aa11.82□□□□□ -0.52
NSMCE1-211ENST00000566087 TMEM40Q8WWA1 233 aa11.82□□□□□ -0.52
NSMCE1-211ENST00000566087 KIFAP3Q92845 792 aa11.82□□□□□ -0.52
NSMCE1-211ENST00000566087 TRAIPQ9BWF2 469 aa11.82□□□□□ -0.52
NSMCE1-211ENST00000566087 NFKBIZQ9BYH8 718 aa11.82□□□□□ -0.52
NSMCE1-211ENST00000566087 C2orf40Q9H1Z8 148 aa11.82□□□□□ -0.52
NSMCE1-211ENST00000566087 TMX1Q9H3N1 280 aa11.82□□□□□ -0.52
NSMCE1-211ENST00000566087 UBN1Q9NPG3 1134 aa11.82□□□□□ -0.52
NSMCE1-211ENST00000566087 DDX19AQ9NUU7 478 aaKnown RBP11.82□□□□□ -0.52
NSMCE1-211ENST00000566087 PCDHB12Q9Y5F1 795 aa11.82□□□□□ -0.52
NSMCE1-211ENST00000566087 TTC3P53804 2025 aa11.82□□□□□ -0.52
NSMCE1-211ENST00000566087 LOXHD1Q8IVV2 1947 aa11.82□□□□□ -0.52
NSMCE1-211ENST00000566087 C9IYK1 514 aa11.81□□□□□ -0.52
NSMCE1-211ENST00000566087 USO1O60763 962 aaKnown RBP11.81□□□□□ -0.52
NSMCE1-211ENST00000566087 EYA4O95677 639 aa11.81□□□□□ -0.52
NSMCE1-211ENST00000566087 GLP2RO95838 553 aa11.81□□□□□ -0.52
NSMCE1-211ENST00000566087 CYP11B2P19099 503 aa11.81□□□□□ -0.52
NSMCE1-211ENST00000566087 ARL2P36404 184 aa11.81□□□□□ -0.52
NSMCE1-211ENST00000566087 TXLNAP40222 546 aa11.81□□□□□ -0.52
NSMCE1-211ENST00000566087 PTPN5P54829 565 aa11.81□□□□□ -0.52
NSMCE1-211ENST00000566087 PTENP60484 403 aa11.81□□□□□ -0.52
NSMCE1-211ENST00000566087 ZXDAP98168 799 aa11.81□□□□□ -0.52
NSMCE1-211ENST00000566087 DRP2Q13474 957 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms