RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 SKIDA1Q1XH10 827 aa5.36□□□□□ -1.55
LINC00561-201ENST00000565815 CXorf67Q86X51 503 aaPredicted RBP5.36□□□□□ -1.55
LINC00561-201ENST00000565815 TSPAN17Q96FV3 270 aa5.36□□□□□ -1.55
LINC00561-201ENST00000565815 FUBP3Q96I24 572 aaKnown RBP eCLIP5.36□□□□□ -1.55
LINC00561-201ENST00000565815 GABBR1Q9UBS5 961 aa5.36□□□□□ -1.55
LINC00561-201ENST00000565815 NOC2LQ9Y3T9 749 aaKnown RBP5.36□□□□□ -1.55
LINC00561-201ENST00000565815 PCDHA5Q9Y5H7 936 aa5.36□□□□□ -1.55
LINC00561-201ENST00000565815 PRSS38A1L453 326 aa5.35□□□□□ -1.55
LINC00561-201ENST00000565815 EXOC5O00471 708 aa5.35□□□□□ -1.55
LINC00561-201ENST00000565815 XPOTO43592 962 aaKnown RBP5.35□□□□□ -1.55
LINC00561-201ENST00000565815 PCDH8O95206 1070 aa5.35□□□□□ -1.55
LINC00561-201ENST00000565815 KLF1Q13351 362 aaPredicted RBP5.35□□□□□ -1.55
LINC00561-201ENST00000565815 ADAM9Q13443 819 aa5.35□□□□□ -1.55
LINC00561-201ENST00000565815 NOLC1Q14978 699 aaKnown RBP eCLIP5.35□□□□□ -1.55
LINC00561-201ENST00000565815 C14orf80Q86SX3 495 aa5.35□□□□□ -1.55
LINC00561-201ENST00000565815 NLGN4XQ8N0W4 816 aa5.35□□□□□ -1.55
LINC00561-201ENST00000565815 PANK1Q8TE04 598 aa5.35□□□□□ -1.55
LINC00561-201ENST00000565815 TOE1Q96GM8 510 aaKnown RBP5.35□□□□□ -1.55
LINC00561-201ENST00000565815 PUS7LQ9H0K6 701 aaKnown RBP5.35□□□□□ -1.55
LINC00561-201ENST00000565815 SLC6A17Q9H1V8 727 aa5.35□□□□□ -1.55
LINC00561-201ENST00000565815 LRRC37A3O60309 1634 aa5.35□□□□□ -1.55
LINC00561-201ENST00000565815 NHSQ6T4R5 1651 aa5.35□□□□□ -1.55
LINC00561-201ENST00000565815 TOPAZ1Q8N9V7 1692 aa5.35□□□□□ -1.55
LINC00561-201ENST00000565815 ZRANB2O95218 330 aaKnown RBP eCLIP5.35□□□□□ -1.55
LINC00561-201ENST00000565815 CPEP16870 476 aa5.35□□□□□ -1.55
LINC00561-201ENST00000565815 MANFP55145 182 aaKnown RBP5.35□□□□□ -1.55
LINC00561-201ENST00000565815 ITGA1P56199 1179 aa5.35□□□□□ -1.55
LINC00561-201ENST00000565815 IL13RA1P78552 427 aa5.35□□□□□ -1.55
LINC00561-201ENST00000565815 ARHGAP44Q17R89 818 aa5.35□□□□□ -1.55
LINC00561-201ENST00000565815 TOR2AQ5JU69 321 aa5.35□□□□□ -1.55
LINC00561-201ENST00000565815 TMEM132EQ6IEE7 984 aa5.35□□□□□ -1.55
LINC00561-201ENST00000565815 LDHDQ86WU2 507 aa5.35□□□□□ -1.55
LINC00561-201ENST00000565815 STPG3Q8N7X2 389 aa5.35□□□□□ -1.55
LINC00561-201ENST00000565815 KCNH5Q8NCM2 988 aa5.35□□□□□ -1.55
LINC00561-201ENST00000565815 TUBGCP5Q96RT8 1024 aa5.35□□□□□ -1.55
LINC00561-201ENST00000565815 NUDT5Q9UKK9 219 aa5.35□□□□□ -1.55
LINC00561-201ENST00000565815 ATP10DQ9P241 1426 aa5.35□□□□□ -1.55
LINC00561-201ENST00000565815 PAPPAQ13219 1627 aa5.35□□□□□ -1.55
LINC00561-201ENST00000565815 TRPM1Q7Z4N2 1603 aa5.35□□□□□ -1.55
LINC00561-201ENST00000565815 YBX1P67809 324 aaKnown RBP5.34□□□□□ -1.55
LINC00561-201ENST00000565815 NFE2Q16621 373 aaPredicted RBP5.34□□□□□ -1.55
LINC00561-201ENST00000565815 CC2D1AQ6P1N0 951 aaPredicted RBP5.34□□□□□ -1.55
LINC00561-201ENST00000565815 ZNF610Q8N9Z0 462 aa5.34□□□□□ -1.55
LINC00561-201ENST00000565815 LRGUKQ96M69 825 aa5.34□□□□□ -1.55
LINC00561-201ENST00000565815 CEP89Q96ST8 783 aa5.34□□□□□ -1.55
LINC00561-201ENST00000565815 DMRT3Q9NQL9 472 aa5.34□□□□□ -1.55
LINC00561-201ENST00000565815 TYW1Q9NV66 732 aaKnown RBP5.34□□□□□ -1.55
LINC00561-201ENST00000565815 ARHGAP28Q9P2N2 729 aa5.34□□□□□ -1.55
LINC00561-201ENST00000565815 CDC42EP3Q9UKI2 254 aa5.34□□□□□ -1.55
LINC00561-201ENST00000565815 TMPRSS11EQ9UL52 423 aa5.34□□□□□ -1.55
LINC00561-201ENST00000565815 ADCY9O60503 1353 aa5.34□□□□□ -1.55
LINC00561-201ENST00000565815 WDR17Q8IZU2 1322 aa5.34□□□□□ -1.55
LINC00561-201ENST00000565815 LRRC10BA6NIK2 292 aa5.34□□□□□ -1.55
LINC00561-201ENST00000565815 GOLGA6L22H0YM25 854 aa5.34□□□□□ -1.55
LINC00561-201ENST00000565815 ITGB5P18084 799 aa5.34□□□□□ -1.55
LINC00561-201ENST00000565815 PHC1P78364 1004 aa5.34□□□□□ -1.55
LINC00561-201ENST00000565815 PIN1Q13526 163 aaPredicted RBP5.34□□□□□ -1.55
LINC00561-201ENST00000565815 CATIPQ7Z7H3 387 aa5.34□□□□□ -1.55
LINC00561-201ENST00000565815 FAM126BQ8IXS8 530 aa5.34□□□□□ -1.55
LINC00561-201ENST00000565815 PHOSPHO1Q8TCT1 267 aa5.34□□□□□ -1.55
LINC00561-201ENST00000565815 ZNF552Q9H707 407 aaPredicted RBP5.34□□□□□ -1.55
LINC00561-201ENST00000565815 ZFP69BQ9UJL9 534 aa5.34□□□□□ -1.55
LINC00561-201ENST00000565815 ZBTB21Q9ULJ3 1066 aa5.34□□□□□ -1.55
LINC00561-201ENST00000565815 SLIT3O75094 1523 aa5.34□□□□□ -1.56
LINC00561-201ENST00000565815 UBA6A0AVT1 1052 aaPredicted RBP5.33□□□□□ -1.56
LINC00561-201ENST00000565815 MAFKO60675 156 aa5.33□□□□□ -1.56
LINC00561-201ENST00000565815 PRPF6O94906 941 aaKnown RBP5.33□□□□□ -1.56
LINC00561-201ENST00000565815 FBXO21O94952 628 aa5.33□□□□□ -1.56
LINC00561-201ENST00000565815 PTGS1P23219 599 aa5.33□□□□□ -1.56
LINC00561-201ENST00000565815 CDK17Q00537 523 aa5.33□□□□□ -1.56
LINC00561-201ENST00000565815 MOGSQ13724 837 aa5.33□□□□□ -1.56
LINC00561-201ENST00000565815 SSPNQ14714 243 aa5.33□□□□□ -1.56
LINC00561-201ENST00000565815 ACAP1Q15027 740 aa5.33□□□□□ -1.56
LINC00561-201ENST00000565815 CHRNA2Q15822 529 aa5.33□□□□□ -1.56
LINC00561-201ENST00000565815 NBPF11Q86T75 865 aa5.33□□□□□ -1.56
LINC00561-201ENST00000565815 ZBTB46Q86UZ6 589 aa5.33□□□□□ -1.56
LINC00561-201ENST00000565815 RASSF3Q86WH2 238 aa5.33□□□□□ -1.56
LINC00561-201ENST00000565815 C7orf31Q8N865 590 aa5.33□□□□□ -1.56
LINC00561-201ENST00000565815 JADE3Q92613 823 aa5.33□□□□□ -1.56
LINC00561-201ENST00000565815 MTG2Q9H4K7 406 aa5.33□□□□□ -1.56
LINC00561-201ENST00000565815 DCP1AQ9NPI6 582 aaPredicted RBP5.33□□□□□ -1.56
LINC00561-201ENST00000565815 TUBD1Q9UJT1 453 aa5.33□□□□□ -1.56
LINC00561-201ENST00000565815 FANCIQ9NVI1 1328 aa5.33□□□□□ -1.56
LINC00561-201ENST00000565815 A0A1B0GTL3 188 aa5.33□□□□□ -1.56
LINC00561-201ENST00000565815 ZNF839A8K0R7 811 aa5.33□□□□□ -1.56
LINC00561-201ENST00000565815 GCP02774 474 aa5.33□□□□□ -1.56
LINC00561-201ENST00000565815 TAL1P17542 331 aaPredicted RBP5.33□□□□□ -1.56
LINC00561-201ENST00000565815 SDHAP31040 664 aa5.33□□□□□ -1.56
LINC00561-201ENST00000565815 SESN3P58005 492 aa5.33□□□□□ -1.56
LINC00561-201ENST00000565815 ANTXR2P58335 489 aa5.33□□□□□ -1.56
LINC00561-201ENST00000565815 FSTL1Q12841 308 aa5.33□□□□□ -1.56
LINC00561-201ENST00000565815 ACAP2Q15057 778 aa5.33□□□□□ -1.56
LINC00561-201ENST00000565815 VMACQ2NL98 169 aa5.33□□□□□ -1.56
LINC00561-201ENST00000565815 TNS2Q63HR2 1409 aa5.33□□□□□ -1.56
LINC00561-201ENST00000565815 RAB24Q969Q5 203 aa5.33□□□□□ -1.56
LINC00561-201ENST00000565815 CCDC120Q96HB5 630 aa5.33□□□□□ -1.56
LINC00561-201ENST00000565815 FAXDC2Q96IV6 333 aa5.33□□□□□ -1.56
LINC00561-201ENST00000565815 EPB41L4AQ9HCS5 686 aaPredicted RBP5.33□□□□□ -1.56
LINC00561-201ENST00000565815 C10orf71Q711Q0 1435 aa5.33□□□□□ -1.56
LINC00561-201ENST00000565815 NSD3Q9BZ95 1437 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms