RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 TCF20Q9UGU0 1960 aaKnown RBP18.55■□□□□ 0.56
USB1-211ENST00000565662 XIRP2A4UGR9 3374 aa18.55■□□□□ 0.56
USB1-211ENST00000565662 WNT7AO00755 349 aa18.54■□□□□ 0.56
USB1-211ENST00000565662 FSCN2O14926 492 aa18.54■□□□□ 0.56
USB1-211ENST00000565662 DTNBO60941 627 aa18.54■□□□□ 0.56
USB1-211ENST00000565662 MED24O75448 989 aa18.54■□□□□ 0.56
USB1-211ENST00000565662 CSDE1O75534 798 aaKnown RBP18.54■□□□□ 0.56
USB1-211ENST00000565662 NAMPTP43490 491 aa18.54■□□□□ 0.56
USB1-211ENST00000565662 EFNA5P52803 228 aa18.54■□□□□ 0.56
USB1-211ENST00000565662 PTGDRQ13258 359 aa18.54■□□□□ 0.56
USB1-211ENST00000565662 ADAM15Q13444 863 aa18.54■□□□□ 0.56
USB1-211ENST00000565662 CAMK1Q14012 370 aa18.54■□□□□ 0.56
USB1-211ENST00000565662 FAM187BQ17R55 369 aa18.54■□□□□ 0.56
USB1-211ENST00000565662 CDCA2Q69YH5 1023 aaPredicted RBP18.54■□□□□ 0.56
USB1-211ENST00000565662 SLC27A1Q6PCB7 646 aa18.54■□□□□ 0.56
USB1-211ENST00000565662 SLC39A11Q8N1S5 342 aa18.54■□□□□ 0.56
USB1-211ENST00000565662 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.54■□□□□ 0.56
USB1-211ENST00000565662 SNX29Q8TEQ0 813 aa18.54■□□□□ 0.56
USB1-211ENST00000565662 TCF25Q9BQ70 676 aa18.54■□□□□ 0.56
USB1-211ENST00000565662 ADPGKQ9BRR6 497 aa18.54■□□□□ 0.56
USB1-211ENST00000565662 CSRNP2Q9H175 543 aa18.54■□□□□ 0.56
USB1-211ENST00000565662 C17orf75Q9HAS0 396 aa18.54■□□□□ 0.56
USB1-211ENST00000565662 BMP2KQ9NSY1 1161 aaPredicted RBP18.54■□□□□ 0.56
USB1-211ENST00000565662 CD207Q9UJ71 328 aa18.54■□□□□ 0.56
USB1-211ENST00000565662 SSX2IPQ9Y2D8 614 aa18.54■□□□□ 0.56
USB1-211ENST00000565662 GIT1Q9Y2X7 761 aa18.54■□□□□ 0.56
USB1-211ENST00000565662 REV3LO60673 3130 aa18.54■□□□□ 0.56
USB1-211ENST00000565662 LRRIQ4A6NIV6 560 aa18.53■□□□□ 0.56
USB1-211ENST00000565662 INPPL1O15357 1258 aa18.53■□□□□ 0.56
USB1-211ENST00000565662 TSPAN1O60635 241 aa18.53■□□□□ 0.56
USB1-211ENST00000565662 ZC3H11AO75152 810 aaKnown RBP eCLIP18.53■□□□□ 0.56
USB1-211ENST00000565662 ITGA4P13612 1032 aa18.53■□□□□ 0.56
USB1-211ENST00000565662 HOXB8P17481 243 aaPredicted RBP18.53■□□□□ 0.56
USB1-211ENST00000565662 CYP11B2P19099 503 aa18.53■□□□□ 0.56
USB1-211ENST00000565662 GLRA2P23416 452 aa18.53■□□□□ 0.56
USB1-211ENST00000565662 HOXA11P31270 313 aaPredicted RBP18.53■□□□□ 0.56
USB1-211ENST00000565662 BCAR1P56945 870 aa18.53■□□□□ 0.56
USB1-211ENST00000565662 MBTD1Q05BQ5 628 aa18.53■□□□□ 0.56
USB1-211ENST00000565662 COASYQ13057 564 aa18.53■□□□□ 0.56
USB1-211ENST00000565662 MAPK6Q16659 721 aa18.53■□□□□ 0.56
USB1-211ENST00000565662 POTEGQ6S5H5 508 aa18.53■□□□□ 0.56
USB1-211ENST00000565662 FAM178BQ8IXR5 827 aa18.53■□□□□ 0.56
USB1-211ENST00000565662 TMEM87AQ8NBN3 555 aa18.53■□□□□ 0.56
USB1-211ENST00000565662 AK8Q96MA6 479 aa18.53■□□□□ 0.56
USB1-211ENST00000565662 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.53■□□□□ 0.56
USB1-211ENST00000565662 TBC1D13Q9NVG8 400 aa18.53■□□□□ 0.56
USB1-211ENST00000565662 KCND2Q9NZV8 630 aa18.53■□□□□ 0.56
USB1-211ENST00000565662 DNM3Q9UQ16 869 aa18.53■□□□□ 0.56
USB1-211ENST00000565662 N4BP3O15049 544 aa18.52■□□□□ 0.56
USB1-211ENST00000565662 OFD1O75665 1012 aa18.52■□□□□ 0.56
USB1-211ENST00000565662 EYA4O95677 639 aa18.52■□□□□ 0.56
USB1-211ENST00000565662 SCP2P22307 547 aa18.52■□□□□ 0.56
USB1-211ENST00000565662 NRIP1P48552 1158 aa18.52■□□□□ 0.56
USB1-211ENST00000565662 ATP2C1P98194 919 aaPredicted RBP18.52■□□□□ 0.56
USB1-211ENST00000565662 SMAD2Q15796 467 aaKnown RBP18.52■□□□□ 0.56
USB1-211ENST00000565662 DUSP6Q16828 381 aa18.52■□□□□ 0.56
USB1-211ENST00000565662 ELMSAN1Q6PJG2 1045 aa18.52■□□□□ 0.56
USB1-211ENST00000565662 PADI6Q6TGC4 694 aa18.52■□□□□ 0.56
USB1-211ENST00000565662 LRRC55Q6ZSA7 311 aa18.52■□□□□ 0.56
USB1-211ENST00000565662 TMC7Q7Z402 723 aa18.52■□□□□ 0.56
USB1-211ENST00000565662 DRC1Q96MC2 740 aa18.52■□□□□ 0.56
USB1-211ENST00000565662 MINDY3Q9H8M7 445 aa18.52■□□□□ 0.56
USB1-211ENST00000565662 IRAK3Q9Y616 596 aa18.52■□□□□ 0.56
USB1-211ENST00000565662 H3BQ06 376 aaPredicted RBP18.51■□□□□ 0.55
USB1-211ENST00000565662 ZBTB39O15060 712 aa18.51■□□□□ 0.55
USB1-211ENST00000565662 DNAJB1P25685 340 aa18.51■□□□□ 0.55
USB1-211ENST00000565662 LARP1BQ659C4 914 aaKnown RBP18.51■□□□□ 0.55
USB1-211ENST00000565662 TMEM184AQ6ZMB5 413 aa18.51■□□□□ 0.55
USB1-211ENST00000565662 DDX53Q86TM3 631 aaKnown RBP18.51■□□□□ 0.55
USB1-211ENST00000565662 PPFIBP1Q86W92 1011 aa18.51■□□□□ 0.55
USB1-211ENST00000565662 ADHFE1Q8IWW8 467 aa18.51■□□□□ 0.55
USB1-211ENST00000565662 C4orf32Q8N8J7 132 aa18.51■□□□□ 0.55
USB1-211ENST00000565662 SMRP1Q8NCR6 262 aa18.51■□□□□ 0.55
USB1-211ENST00000565662 DEPTORQ8TB45 409 aa18.51■□□□□ 0.55
USB1-211ENST00000565662 ASAP3Q8TDY4 903 aa18.51■□□□□ 0.55
USB1-211ENST00000565662 CASP10Q92851 521 aa18.51■□□□□ 0.55
USB1-211ENST00000565662 IGFLR1Q9H665 355 aa18.51■□□□□ 0.55
USB1-211ENST00000565662 DPP7Q9UHL4 492 aa18.51■□□□□ 0.55
USB1-211ENST00000565662 INPP5FQ9Y2H2 1132 aa18.51■□□□□ 0.55
USB1-211ENST00000565662 IPPQ9Y573 584 aa18.51■□□□□ 0.55
USB1-211ENST00000565662 PCDHB6Q9Y5E3 794 aa18.51■□□□□ 0.55
USB1-211ENST00000565662 A0A1B0GUA9 196 aa18.5■□□□□ 0.55
USB1-211ENST00000565662 PDIA4P13667 645 aaKnown RBP18.5■□□□□ 0.55
USB1-211ENST00000565662 ALADP13716 330 aa18.5■□□□□ 0.55
USB1-211ENST00000565662 IRS1P35568 1242 aa18.5■□□□□ 0.55
USB1-211ENST00000565662 DCAF4L1Q3SXM0 396 aa18.5■□□□□ 0.55
USB1-211ENST00000565662 TPRNQ4KMQ1 711 aa18.5■□□□□ 0.55
USB1-211ENST00000565662 PLPP4Q5VZY2 271 aa18.5■□□□□ 0.55
USB1-211ENST00000565662 AGMOQ6ZNB7 445 aa18.5■□□□□ 0.55
USB1-211ENST00000565662 GJD3Q8N144 294 aa18.5■□□□□ 0.55
USB1-211ENST00000565662 IGSF21Q96ID5 467 aa18.5■□□□□ 0.55
USB1-211ENST00000565662 CDK5RAP3Q96JB5 506 aa18.5■□□□□ 0.55
USB1-211ENST00000565662 MSLNLQ96KJ4 702 aa18.5■□□□□ 0.55
USB1-211ENST00000565662 RPS6KC1Q96S38 1066 aa18.5■□□□□ 0.55
USB1-211ENST00000565662 BHMT2Q9H2M3 363 aa18.5■□□□□ 0.55
USB1-211ENST00000565662 DZANK1Q9NVP4 752 aa18.5■□□□□ 0.55
USB1-211ENST00000565662 KIAA1024Q9UPX6 916 aa18.5■□□□□ 0.55
USB1-211ENST00000565662 TDRD15B5MCY1 1934 aaKnown RBP18.49■□□□□ 0.55
USB1-211ENST00000565662 MYO7AQ13402 2215 aa18.49■□□□□ 0.55
USB1-211ENST00000565662 MBTPS2O43462 519 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms