RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 SMG8Q8ND04 991 aaKnown RBP17.43■□□□□ 0.38
CDH3-204ENST00000565453 BCL7CQ8WUZ0 217 aaPredicted RBP17.43■□□□□ 0.38
CDH3-204ENST00000565453 POP1Q99575 1024 aaKnown RBP17.43■□□□□ 0.38
CDH3-204ENST00000565453 TUFT1Q9NNX1 390 aa17.43■□□□□ 0.38
CDH3-204ENST00000565453 INPP5FQ9Y2H2 1132 aa17.43■□□□□ 0.38
CDH3-204ENST00000565453 USP15Q9Y4E8 981 aaPredicted RBP17.43■□□□□ 0.38
CDH3-204ENST00000565453 FAM86C2PA6NEL3 165 aa17.42■□□□□ 0.38
CDH3-204ENST00000565453 C2orf71A6NGG8 1288 aa17.42■□□□□ 0.38
CDH3-204ENST00000565453 ZC3H11AO75152 810 aaKnown RBP eCLIP17.42■□□□□ 0.38
CDH3-204ENST00000565453 NCLP19338 710 aaKnown RBP17.42■□□□□ 0.38
CDH3-204ENST00000565453 AXLP30530 894 aa17.42■□□□□ 0.38
CDH3-204ENST00000565453 AFF1P51825 1210 aaKnown RBP17.42■□□□□ 0.38
CDH3-204ENST00000565453 TFDP1Q14186 410 aa17.42■□□□□ 0.38
CDH3-204ENST00000565453 SMC1AQ14683 1233 aaKnown RBP17.42■□□□□ 0.38
CDH3-204ENST00000565453 ZNF280BQ86YH2 543 aa17.42■□□□□ 0.38
CDH3-204ENST00000565453 NOSTRINQ8IVI9 506 aa17.42■□□□□ 0.38
CDH3-204ENST00000565453 C4orf32Q8N8J7 132 aa17.42■□□□□ 0.38
CDH3-204ENST00000565453 MRPL43Q8N983 215 aaKnown RBP17.42■□□□□ 0.38
CDH3-204ENST00000565453 SUSD6Q92537 303 aa17.42■□□□□ 0.38
CDH3-204ENST00000565453 IGSF21Q96ID5 467 aa17.42■□□□□ 0.38
CDH3-204ENST00000565453 POLR3CQ9BUI4 534 aaPredicted RBP17.42■□□□□ 0.38
CDH3-204ENST00000565453 EIF2AQ9BY44 585 aaKnown RBP17.42■□□□□ 0.38
CDH3-204ENST00000565453 NFKBIZQ9BYH8 718 aa17.42■□□□□ 0.38
CDH3-204ENST00000565453 ZBP1Q9H171 429 aa17.42■□□□□ 0.38
CDH3-204ENST00000565453 POLR3FQ9H1D9 316 aaPredicted RBP17.42■□□□□ 0.38
CDH3-204ENST00000565453 S1PR5Q9H228 398 aa17.42■□□□□ 0.38
CDH3-204ENST00000565453 RSAD1Q9HA92 442 aa17.42■□□□□ 0.38
CDH3-204ENST00000565453 DNAJB4Q9UDY4 337 aa17.42■□□□□ 0.38
CDH3-204ENST00000565453 DBR1Q9UK59 544 aaKnown RBP17.42■□□□□ 0.38
CDH3-204ENST00000565453 CNTNAP2Q9UHC6 1331 aa17.42■□□□□ 0.38
CDH3-204ENST00000565453 CARNS1A5YM72 827 aa17.41■□□□□ 0.38
CDH3-204ENST00000565453 DCXO43602 365 aa17.41■□□□□ 0.38
CDH3-204ENST00000565453 USO1O60763 962 aaKnown RBP17.41■□□□□ 0.38
CDH3-204ENST00000565453 DDHD2O94830 711 aa17.41■□□□□ 0.38
CDH3-204ENST00000565453 ERLIN2O94905 339 aa17.41■□□□□ 0.38
CDH3-204ENST00000565453 OR52Z1P0C646 297 aa17.41■□□□□ 0.38
CDH3-204ENST00000565453 ALADP13716 330 aa17.41■□□□□ 0.38
CDH3-204ENST00000565453 TECP42680 631 aa17.41■□□□□ 0.38
CDH3-204ENST00000565453 TRAPPC10P48553 1259 aa17.41■□□□□ 0.38
CDH3-204ENST00000565453 SLC11A1P49279 550 aa17.41■□□□□ 0.38
CDH3-204ENST00000565453 TTC38Q5R3I4 469 aa17.41■□□□□ 0.38
CDH3-204ENST00000565453 ANKRD54Q6NXT1 300 aa17.41■□□□□ 0.38
CDH3-204ENST00000565453 SYCE2Q6PIF2 218 aa17.41■□□□□ 0.38
CDH3-204ENST00000565453 DDX53Q86TM3 631 aaKnown RBP17.41■□□□□ 0.38
CDH3-204ENST00000565453 FAM184AQ8NB25 1140 aa17.41■□□□□ 0.38
CDH3-204ENST00000565453 CNNM3Q8NE01 707 aa17.41■□□□□ 0.38
CDH3-204ENST00000565453 CCDC51Q96ER9 411 aa17.41■□□□□ 0.38
CDH3-204ENST00000565453 TMEM169Q96HH4 297 aa17.41■□□□□ 0.38
CDH3-204ENST00000565453 VN1R3Q9BXE9 311 aa17.41■□□□□ 0.38
CDH3-204ENST00000565453 LOC730098B7Z3J9 87 aa17.4■□□□□ 0.38
CDH3-204ENST00000565453 INO80B-WBP1J3KQ70 363 aa17.4■□□□□ 0.38
CDH3-204ENST00000565453 INPPL1O15357 1258 aa17.4■□□□□ 0.38
CDH3-204ENST00000565453 CLASP2O75122 1294 aaKnown RBP17.4■□□□□ 0.38
CDH3-204ENST00000565453 U2AF2P26368 475 aaKnown RBP eCLIP17.4■□□□□ 0.38
CDH3-204ENST00000565453 RPA1P27694 616 aa17.4■□□□□ 0.38
CDH3-204ENST00000565453 RNASELQ05823 741 aaKnown RBP17.4■□□□□ 0.38
CDH3-204ENST00000565453 NBR1Q14596 966 aa17.4■□□□□ 0.38
CDH3-204ENST00000565453 VPS52Q8N1B4 723 aa17.4■□□□□ 0.38
CDH3-204ENST00000565453 URGCPQ8TCY9 931 aa17.4■□□□□ 0.38
CDH3-204ENST00000565453 CPB2Q96IY4 423 aa17.4■□□□□ 0.38
CDH3-204ENST00000565453 CCDC43Q96MW1 224 aaKnown RBP17.4■□□□□ 0.38
CDH3-204ENST00000565453 CSRNP2Q9H175 543 aa17.4■□□□□ 0.38
CDH3-204ENST00000565453 RNF39Q9H2S5 420 aa17.4■□□□□ 0.38
CDH3-204ENST00000565453 GPRC5CQ9NQ84 441 aa17.4■□□□□ 0.38
CDH3-204ENST00000565453 IPPQ9Y573 584 aa17.4■□□□□ 0.38
CDH3-204ENST00000565453 CTSAP10619 480 aa17.39■□□□□ 0.37
CDH3-204ENST00000565453 ARF4P18085 180 aaPredicted RBP17.39■□□□□ 0.37
CDH3-204ENST00000565453 TOB1P50616 345 aaPredicted RBP17.39■□□□□ 0.37
CDH3-204ENST00000565453 CBX2Q14781 532 aaPredicted RBP17.39■□□□□ 0.37
CDH3-204ENST00000565453 RABEP1Q15276 862 aa17.39■□□□□ 0.37
CDH3-204ENST00000565453 LLGL2Q6P1M3 1020 aa17.39■□□□□ 0.37
CDH3-204ENST00000565453 NOTUMQ6P988 496 aa17.39■□□□□ 0.37
CDH3-204ENST00000565453 POTEGQ6S5H5 508 aa17.39■□□□□ 0.37
CDH3-204ENST00000565453 RNF135Q8IUD6 432 aa17.39■□□□□ 0.37
CDH3-204ENST00000565453 NACC1Q96RE7 527 aa17.39■□□□□ 0.37
CDH3-204ENST00000565453 TMEM175Q9BSA9 504 aa17.39■□□□□ 0.37
CDH3-204ENST00000565453 PHF7Q9BWX1 381 aaPredicted RBP17.39■□□□□ 0.37
CDH3-204ENST00000565453 GBP3Q9H0R5 595 aa17.39■□□□□ 0.37
CDH3-204ENST00000565453 HCFC2Q9Y5Z7 792 aa17.39■□□□□ 0.37
CDH3-204ENST00000565453 IRAK3Q9Y616 596 aa17.39■□□□□ 0.37
CDH3-204ENST00000565453 B4GALT5O43286 388 aa17.38■□□□□ 0.37
CDH3-204ENST00000565453 CXCL14O95715 111 aa17.38■□□□□ 0.37
CDH3-204ENST00000565453 SRGAP2BP0DMP2 458 aa17.38■□□□□ 0.37
CDH3-204ENST00000565453 ITGA4P13612 1032 aa17.38■□□□□ 0.37
CDH3-204ENST00000565453 FXR2P51116 673 aaKnown RBP eCLIP17.38■□□□□ 0.37
CDH3-204ENST00000565453 ECM1Q16610 540 aa17.38■□□□□ 0.37
CDH3-204ENST00000565453 HERC4Q5GLZ8 1057 aaPredicted RBP17.38■□□□□ 0.37
CDH3-204ENST00000565453 CDCA2Q69YH5 1023 aaPredicted RBP17.38■□□□□ 0.37
CDH3-204ENST00000565453 MAEAQ7L5Y9 396 aa17.38■□□□□ 0.37
CDH3-204ENST00000565453 MCPH1Q8NEM0 835 aa17.38■□□□□ 0.37
CDH3-204ENST00000565453 ERMNQ8TAM6 284 aa17.38■□□□□ 0.37
CDH3-204ENST00000565453 AUTS2Q8WXX7 1259 aa17.38■□□□□ 0.37
CDH3-204ENST00000565453 UBN1Q9NPG3 1134 aa17.38■□□□□ 0.37
CDH3-204ENST00000565453 KANSL3Q9P2N6 904 aa17.38■□□□□ 0.37
CDH3-204ENST00000565453 HES2Q9Y543 173 aa17.38■□□□□ 0.37
CDH3-204ENST00000565453 PRR33A8MZF0 331 aa17.37■□□□□ 0.37
CDH3-204ENST00000565453 POMCP01189 267 aa17.37■□□□□ 0.37
CDH3-204ENST00000565453 HOXB8P17481 243 aaPredicted RBP17.37■□□□□ 0.37
CDH3-204ENST00000565453 MUTP22033 750 aa17.37■□□□□ 0.37
CDH3-204ENST00000565453 GNL2Q13823 731 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms