RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 ATP4AP20648 1035 aa10.24□□□□□ -0.77
VPS9D1-205ENST00000565452 CXCL12P48061 93 aa10.24□□□□□ -0.77
VPS9D1-205ENST00000565452 CCR3P51677 355 aa10.24□□□□□ -0.77
VPS9D1-205ENST00000565452 CLCN3P51790 818 aa10.24□□□□□ -0.77
VPS9D1-205ENST00000565452 RING1Q06587 406 aa10.24□□□□□ -0.77
VPS9D1-205ENST00000565452 TRDNQ13061 729 aa10.24□□□□□ -0.77
VPS9D1-205ENST00000565452 FZD5Q13467 585 aa10.24□□□□□ -0.77
VPS9D1-205ENST00000565452 LONRF3Q496Y0 759 aa10.24□□□□□ -0.77
VPS9D1-205ENST00000565452 CEP55Q53EZ4 464 aa10.24□□□□□ -0.77
VPS9D1-205ENST00000565452 TWF2Q6IBS0 349 aaKnown RBP10.24□□□□□ -0.77
VPS9D1-205ENST00000565452 TRMT1LQ7Z2T5 733 aaKnown RBP10.24□□□□□ -0.77
VPS9D1-205ENST00000565452 CATIPQ7Z7H3 387 aa10.24□□□□□ -0.77
VPS9D1-205ENST00000565452 NLRP7Q8WX94 980 aa10.24□□□□□ -0.77
VPS9D1-205ENST00000565452 LPPQ93052 612 aa10.24□□□□□ -0.77
VPS9D1-205ENST00000565452 KIF12Q96FN5 646 aa10.24□□□□□ -0.77
VPS9D1-205ENST00000565452 LSM14BQ9BX40 385 aaKnown RBP10.24□□□□□ -0.77
VPS9D1-205ENST00000565452 GCOM2Q9BZD3 368 aaPredicted RBP10.24□□□□□ -0.77
VPS9D1-205ENST00000565452 NRBP2Q9NSY0 501 aa10.24□□□□□ -0.77
VPS9D1-205ENST00000565452 FLNBO75369 2602 aaKnown RBP10.23□□□□□ -0.77
VPS9D1-205ENST00000565452 SETXQ7Z333 2677 aaKnown RBP10.23□□□□□ -0.77
VPS9D1-205ENST00000565452 SRRM3A6NNA2 597 aaPredicted RBP10.23□□□□□ -0.77
VPS9D1-205ENST00000565452 TGM5O43548 720 aa10.23□□□□□ -0.77
VPS9D1-205ENST00000565452 HRO43593 1189 aa10.23□□□□□ -0.77
VPS9D1-205ENST00000565452 TDGF1P13385 188 aa10.23□□□□□ -0.77
VPS9D1-205ENST00000565452 FGFR4P22455 802 aa10.23□□□□□ -0.77
VPS9D1-205ENST00000565452 ZNF76P36508 570 aa10.23□□□□□ -0.77
VPS9D1-205ENST00000565452 GLUD2P49448 558 aa10.23□□□□□ -0.77
VPS9D1-205ENST00000565452 RAB27AP51159 221 aa10.23□□□□□ -0.77
VPS9D1-205ENST00000565452 GPC3P51654 580 aa10.23□□□□□ -0.77
VPS9D1-205ENST00000565452 TROAPQ12815 778 aa10.23□□□□□ -0.77
VPS9D1-205ENST00000565452 ITGB3BPQ13352 177 aaPredicted RBP10.23□□□□□ -0.77
VPS9D1-205ENST00000565452 SART3Q15020 963 aaKnown RBP10.23□□□□□ -0.77
VPS9D1-205ENST00000565452 ANKRD45Q5TZF3 282 aa10.23□□□□□ -0.77
VPS9D1-205ENST00000565452 TAS1R1Q7RTX1 841 aa10.23□□□□□ -0.77
VPS9D1-205ENST00000565452 GRASPQ7Z6J2 395 aaPredicted RBP10.23□□□□□ -0.77
VPS9D1-205ENST00000565452 CCDC60Q8IWA6 550 aaPredicted RBP10.23□□□□□ -0.77
VPS9D1-205ENST00000565452 FGF13Q92913 245 aa10.23□□□□□ -0.77
VPS9D1-205ENST00000565452 MAP4K1Q92918 833 aa10.23□□□□□ -0.77
VPS9D1-205ENST00000565452 LZTS2Q9BRK4 669 aa10.23□□□□□ -0.77
VPS9D1-205ENST00000565452 PHF20Q9BVI0 1012 aa10.23□□□□□ -0.77
VPS9D1-205ENST00000565452 HERC2P3Q9BVR0 1158 aa10.23□□□□□ -0.77
VPS9D1-205ENST00000565452 SPZ1Q9BXG8 430 aa10.23□□□□□ -0.77
VPS9D1-205ENST00000565452 INO80BQ9C086 356 aaPredicted RBP10.23□□□□□ -0.77
VPS9D1-205ENST00000565452 CHRDQ9H2X0 955 aa10.23□□□□□ -0.77
VPS9D1-205ENST00000565452 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.23□□□□□ -0.77
VPS9D1-205ENST00000565452 PPP4R2Q9NY27 417 aa10.23□□□□□ -0.77
VPS9D1-205ENST00000565452 MAFBQ9Y5Q3 323 aaPredicted RBP10.23□□□□□ -0.77
VPS9D1-205ENST00000565452 ZZEF1O43149 2961 aa10.22□□□□□ -0.77
VPS9D1-205ENST00000565452 MEIS1O00470 390 aa10.22□□□□□ -0.77
VPS9D1-205ENST00000565452 NR1I2O75469 434 aa10.22□□□□□ -0.77
VPS9D1-205ENST00000565452 ZMYND10O75800 440 aa10.22□□□□□ -0.77
VPS9D1-205ENST00000565452 DDHD2O94830 711 aa10.22□□□□□ -0.77
VPS9D1-205ENST00000565452 CCNE2O96020 404 aa10.22□□□□□ -0.77
VPS9D1-205ENST00000565452 ZNF806P0C7X5 589 aa10.22□□□□□ -0.77
VPS9D1-205ENST00000565452 GNAQP50148 359 aa10.22□□□□□ -0.77
VPS9D1-205ENST00000565452 DSG1Q02413 1049 aa10.22□□□□□ -0.77
VPS9D1-205ENST00000565452 STPG1Q5TH74 334 aa10.22□□□□□ -0.77
VPS9D1-205ENST00000565452 LILRA6Q6PI73 481 aa10.22□□□□□ -0.77
VPS9D1-205ENST00000565452 CEP68Q76N32 757 aa10.22□□□□□ -0.77
VPS9D1-205ENST00000565452 CYB5R4Q7L1T6 521 aa10.22□□□□□ -0.77
VPS9D1-205ENST00000565452 CENPQQ7L2Z9 268 aaPredicted RBP10.22□□□□□ -0.77
VPS9D1-205ENST00000565452 RILPL2Q969X0 211 aa10.22□□□□□ -0.77
VPS9D1-205ENST00000565452 CCDC136Q96JN2 1154 aa10.22□□□□□ -0.77
VPS9D1-205ENST00000565452 ZNF668Q96K58 619 aaPredicted RBP10.22□□□□□ -0.77
VPS9D1-205ENST00000565452 FAM167AQ96KS9 214 aa10.22□□□□□ -0.77
VPS9D1-205ENST00000565452 MAP3K14Q99558 947 aa10.22□□□□□ -0.77
VPS9D1-205ENST00000565452 KXD1Q9BQD3 176 aa10.22□□□□□ -0.77
VPS9D1-205ENST00000565452 DSCC1Q9BVC3 393 aa10.22□□□□□ -0.77
VPS9D1-205ENST00000565452 LMAN1LQ9HAT1 526 aa10.22□□□□□ -0.77
VPS9D1-205ENST00000565452 FAM105AQ9NUU6 356 aa10.22□□□□□ -0.77
VPS9D1-205ENST00000565452 FNIP2Q9P278 1114 aa10.22□□□□□ -0.77
VPS9D1-205ENST00000565452 MYH6P13533 1939 aa10.21□□□□□ -0.77
VPS9D1-205ENST00000565452 FRYQ5TBA9 3013 aa10.21□□□□□ -0.77
VPS9D1-205ENST00000565452 DDX39AO00148 427 aaKnown RBP10.21□□□□□ -0.77
VPS9D1-205ENST00000565452 AXIN1O15169 862 aa10.21□□□□□ -0.77
VPS9D1-205ENST00000565452 CSDE1O75534 798 aaKnown RBP10.21□□□□□ -0.77
VPS9D1-205ENST00000565452 FOSP01100 380 aaPredicted RBP10.21□□□□□ -0.77
VPS9D1-205ENST00000565452 PSAPP07602 524 aa10.21□□□□□ -0.77
VPS9D1-205ENST00000565452 HNRNPA1P09651 372 aaKnown RBP eCLIP10.21□□□□□ -0.77
VPS9D1-205ENST00000565452 SDSP20132 328 aa10.21□□□□□ -0.77
VPS9D1-205ENST00000565452 SFPQP23246 707 aaKnown RBP eCLIP10.21□□□□□ -0.77
VPS9D1-205ENST00000565452 PDE1AP54750 535 aa10.21□□□□□ -0.77
VPS9D1-205ENST00000565452 NUCB1Q02818 461 aa10.21□□□□□ -0.77
VPS9D1-205ENST00000565452 CREMQ03060 361 aa10.21□□□□□ -0.77
VPS9D1-205ENST00000565452 UBE2SQ16763 222 aa10.21□□□□□ -0.77
VPS9D1-205ENST00000565452 PSAPL1Q6NUJ1 521 aa10.21□□□□□ -0.77
VPS9D1-205ENST00000565452 CHD1LQ86WJ1 897 aa10.21□□□□□ -0.77
VPS9D1-205ENST00000565452 GPR65Q8IYL9 337 aa10.21□□□□□ -0.77
VPS9D1-205ENST00000565452 LRRC71Q8N4P6 559 aa10.21□□□□□ -0.77
VPS9D1-205ENST00000565452 FAM160A2Q8N612 972 aaPredicted RBP10.21□□□□□ -0.77
VPS9D1-205ENST00000565452 LINC01465Q8N7H1 131 aa10.21□□□□□ -0.77
VPS9D1-205ENST00000565452 CTCFLQ8NI51 663 aaPredicted RBP10.21□□□□□ -0.77
VPS9D1-205ENST00000565452 COLEC11Q9BWP8 271 aa10.21□□□□□ -0.77
VPS9D1-205ENST00000565452 HEBP1Q9NRV9 189 aa10.21□□□□□ -0.77
VPS9D1-205ENST00000565452 RXFP3Q9NSD7 469 aa10.21□□□□□ -0.77
VPS9D1-205ENST00000565452 TCEAL9Q9UHQ7 104 aa10.21□□□□□ -0.77
VPS9D1-205ENST00000565452 NDRG2Q9UN36 371 aaKnown RBP10.21□□□□□ -0.77
VPS9D1-205ENST00000565452 CHURC1-FNTBB4DL54 471 aa10.2□□□□□ -0.78
VPS9D1-205ENST00000565452 TAF4O00268 1085 aa10.2□□□□□ -0.78
VPS9D1-205ENST00000565452 XYLBO75191 536 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms