RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 RFC5P40937 340 aa9.59□□□□□ -0.87
CAPN3-213ENST00000565173 TCF15Q12870 199 aa9.59□□□□□ -0.87
CAPN3-213ENST00000565173 NR5A1Q13285 461 aa9.59□□□□□ -0.87
CAPN3-213ENST00000565173 CTTNQ14247 550 aaKnown RBP9.59□□□□□ -0.87
CAPN3-213ENST00000565173 PTPN14Q15678 1187 aa9.59□□□□□ -0.87
CAPN3-213ENST00000565173 FERMT3Q86UX7 667 aa9.59□□□□□ -0.87
CAPN3-213ENST00000565173 EXOC8Q8IYI6 725 aa9.59□□□□□ -0.87
CAPN3-213ENST00000565173 SMG8Q8ND04 991 aaKnown RBP9.59□□□□□ -0.87
CAPN3-213ENST00000565173 PSPC1Q8WXF1 523 aaKnown RBP9.59□□□□□ -0.87
CAPN3-213ENST00000565173 PGBD4Q96DM1 585 aa9.59□□□□□ -0.87
CAPN3-213ENST00000565173 NECTIN4Q96NY8 510 aa9.59□□□□□ -0.87
CAPN3-213ENST00000565173 RNF39Q9H2S5 420 aa9.59□□□□□ -0.87
CAPN3-213ENST00000565173 ZSWIM4Q9H7M6 989 aa9.59□□□□□ -0.87
CAPN3-213ENST00000565173 XPNPEP1Q9NQW7 623 aa9.59□□□□□ -0.87
CAPN3-213ENST00000565173 ORC3Q9UBD5 711 aaPredicted RBP9.59□□□□□ -0.87
CAPN3-213ENST00000565173 INPP5FQ9Y2H2 1132 aa9.59□□□□□ -0.87
CAPN3-213ENST00000565173 ZDBF2Q9HCK1 2354 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 CARNS1A5YM72 827 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 WNT7AO00755 349 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 NRP1O14786 923 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 GAS2O43903 313 aaKnown RBP9.58□□□□□ -0.88
CAPN3-213ENST00000565173 LYPLA2O95372 231 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 LARGE1O95461 756 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 EFEMP2O95967 443 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 POMCP01189 267 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 ALDH2P05091 517 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 XBP1P17861 261 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 NCLP19338 710 aaKnown RBP9.58□□□□□ -0.88
CAPN3-213ENST00000565173 AVPR2P30518 371 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 MTHFRP42898 656 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 AK2P54819 239 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 VCPP55072 806 aaKnown RBP9.58□□□□□ -0.88
CAPN3-213ENST00000565173 ANAPC15P60006 121 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 PTENP60484 403 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 CYP4A11Q02928 519 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 RNASELQ05823 741 aaKnown RBP9.58□□□□□ -0.88
CAPN3-213ENST00000565173 GIT2Q14161 759 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 BMS1Q14692 1282 aaKnown RBP9.58□□□□□ -0.88
CAPN3-213ENST00000565173 EMC2Q15006 297 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 ME3Q16798 604 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 XKR9Q5GH70 373 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 RARS2Q5T160 578 aaKnown RBP9.58□□□□□ -0.88
CAPN3-213ENST00000565173 NCAPH2Q6IBW4 605 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 CES5AQ6NT32 575 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 OTUD6AQ7L8S5 288 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 TPH2Q8IWU9 490 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 SUGP1Q8IWZ8 645 aaKnown RBP9.58□□□□□ -0.88
CAPN3-213ENST00000565173 SLFN12Q8IYM2 578 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 NECAB1Q8N987 351 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 RNF149Q8NC42 400 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 KREMEN2Q8NCW0 462 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 TCP11Q8WWU5 503 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 NAP1L4Q99733 375 aaKnown RBP9.58□□□□□ -0.88
CAPN3-213ENST00000565173 TMEM175Q9BSA9 504 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 GBP3Q9H0R5 595 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 SMOC2Q9H3U7 446 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 RSAD1Q9HA92 442 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 TSHZ2Q9NRE2 1034 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 BMP2KQ9NSY1 1161 aaPredicted RBP9.58□□□□□ -0.88
CAPN3-213ENST00000565173 KANSL3Q9P2N6 904 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 PCDHA12Q9UN75 941 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 NR2E1Q9Y466 385 aa9.58□□□□□ -0.88
CAPN3-213ENST00000565173 KMT2EQ8IZD2 1858 aa9.57□□□□□ -0.88
CAPN3-213ENST00000565173 BTBD18B2RXH4 712 aa9.57□□□□□ -0.88
CAPN3-213ENST00000565173 INPPL1O15357 1258 aa9.57□□□□□ -0.88
CAPN3-213ENST00000565173 TSPAN1O60635 241 aa9.57□□□□□ -0.88
CAPN3-213ENST00000565173 BRD1O95696 1058 aa9.57□□□□□ -0.88
CAPN3-213ENST00000565173 PDGFBP01127 241 aaPredicted RBP9.57□□□□□ -0.88
CAPN3-213ENST00000565173 CNPP09543 421 aaKnown RBP9.57□□□□□ -0.88
CAPN3-213ENST00000565173 CA8P35219 290 aa9.57□□□□□ -0.88
CAPN3-213ENST00000565173 KRT2P35908 639 aa9.57□□□□□ -0.88
CAPN3-213ENST00000565173 ARL2P36404 184 aa9.57□□□□□ -0.88
CAPN3-213ENST00000565173 CLCN4P51793 760 aa9.57□□□□□ -0.88
CAPN3-213ENST00000565173 POU5F1BQ06416 359 aa9.57□□□□□ -0.88
CAPN3-213ENST00000565173 PCBP1Q15365 356 aaKnown RBP eCLIP9.57□□□□□ -0.88
CAPN3-213ENST00000565173 AMHR2Q16671 573 aa9.57□□□□□ -0.88
CAPN3-213ENST00000565173 ATAT1Q5SQI0 421 aa9.57□□□□□ -0.88
CAPN3-213ENST00000565173 KIAA1841Q6NSI8 718 aa9.57□□□□□ -0.88
CAPN3-213ENST00000565173 TMC5Q6UXY8 1006 aa9.57□□□□□ -0.88
CAPN3-213ENST00000565173 TAS1R1Q7RTX1 841 aa9.57□□□□□ -0.88
CAPN3-213ENST00000565173 IFNLR1Q8IU57 520 aaPredicted RBP9.57□□□□□ -0.88
CAPN3-213ENST00000565173 COLGALT2Q8IYK4 626 aa9.57□□□□□ -0.88
CAPN3-213ENST00000565173 RNF168Q8IYW5 571 aaPredicted RBP9.57□□□□□ -0.88
CAPN3-213ENST00000565173 ZDHHC14Q8IZN3 488 aa9.57□□□□□ -0.88
CAPN3-213ENST00000565173 URGCPQ8TCY9 931 aa9.57□□□□□ -0.88
CAPN3-213ENST00000565173 RIPOR3Q96MK2 946 aa9.57□□□□□ -0.88
CAPN3-213ENST00000565173 KLHL5Q96PQ7 755 aa9.57□□□□□ -0.88
CAPN3-213ENST00000565173 MTMR9Q96QG7 549 aa9.57□□□□□ -0.88
CAPN3-213ENST00000565173 MTRQ99707 1265 aa9.57□□□□□ -0.88
CAPN3-213ENST00000565173 EIF2AK1Q9BQI3 630 aaKnown RBP9.57□□□□□ -0.88
CAPN3-213ENST00000565173 EIF2AQ9BY44 585 aaKnown RBP9.57□□□□□ -0.88
CAPN3-213ENST00000565173 DZANK1Q9NVP4 752 aa9.57□□□□□ -0.88
CAPN3-213ENST00000565173 MARCH5Q9NX47 278 aa9.57□□□□□ -0.88
CAPN3-213ENST00000565173 MIOSQ9NXC5 875 aa9.57□□□□□ -0.88
CAPN3-213ENST00000565173 SORCS3Q9UPU3 1222 aa9.57□□□□□ -0.88
CAPN3-213ENST00000565173 USTQ9Y2C2 406 aa9.57□□□□□ -0.88
CAPN3-213ENST00000565173 FAN1Q9Y2M0 1017 aa9.57□□□□□ -0.88
CAPN3-213ENST00000565173 IPPQ9Y573 584 aa9.57□□□□□ -0.88
CAPN3-213ENST00000565173 MYO10Q9HD67 2058 aa9.57□□□□□ -0.88
CAPN3-213ENST00000565173 CNTNAP2Q9UHC6 1331 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms