RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 SPOPO43791 374 aa22.05■■□□□ 1.12
MAP1LC3B-206ENST00000564844 LDHCP07864 332 aa22.05■■□□□ 1.12
MAP1LC3B-206ENST00000564844 TCP10Q12799 353 aa22.05■■□□□ 1.12
MAP1LC3B-206ENST00000564844 BIRC2Q13490 618 aa22.05■■□□□ 1.12
MAP1LC3B-206ENST00000564844 ZNF268Q14587 947 aaPredicted RBP22.05■■□□□ 1.12
MAP1LC3B-206ENST00000564844 TAF11Q15544 211 aa22.05■■□□□ 1.12
MAP1LC3B-206ENST00000564844 ZNF449Q6P9G9 518 aa22.05■■□□□ 1.12
MAP1LC3B-206ENST00000564844 SLC30A5Q8TAD4 765 aa22.05■■□□□ 1.12
MAP1LC3B-206ENST00000564844 ANO3Q9BYT9 981 aa22.05■■□□□ 1.12
MAP1LC3B-206ENST00000564844 UBE2TQ9NPD8 197 aaPredicted RBP22.05■■□□□ 1.12
MAP1LC3B-206ENST00000564844 ADAM22Q9P0K1 906 aa22.05■■□□□ 1.12
MAP1LC3B-206ENST00000564844 SPATA31C1P0DKV0 1188 aa22.04■■□□□ 1.12
MAP1LC3B-206ENST00000564844 BRAFP15056 766 aa22.04■■□□□ 1.12
MAP1LC3B-206ENST00000564844 LMNB1P20700 586 aa22.04■■□□□ 1.12
MAP1LC3B-206ENST00000564844 RPL13P26373 211 aaKnown RBP22.04■■□□□ 1.12
MAP1LC3B-206ENST00000564844 GSTO1P78417 241 aa22.04■■□□□ 1.12
MAP1LC3B-206ENST00000564844 ANKRD20A2Q5SQ80 823 aa22.04■■□□□ 1.12
MAP1LC3B-206ENST00000564844 ANKRD20A1Q5TYW2 823 aa22.04■■□□□ 1.12
MAP1LC3B-206ENST00000564844 ANKRD20A3Q5VUR7 823 aa22.04■■□□□ 1.12
MAP1LC3B-206ENST00000564844 KIAA0825Q8IV33 1275 aa22.04■■□□□ 1.12
MAP1LC3B-206ENST00000564844 OLIG1Q8TAK6 271 aa22.04■■□□□ 1.12
MAP1LC3B-206ENST00000564844 TGS1Q96RS0 853 aaKnown RBP22.04■■□□□ 1.12
MAP1LC3B-206ENST00000564844 CLDN3O15551 220 aa22.04■■□□□ 1.12
MAP1LC3B-206ENST00000564844 PHF2O75151 1096 aa22.04■■□□□ 1.12
MAP1LC3B-206ENST00000564844 SPAG7O75391 227 aa22.04■■□□□ 1.12
MAP1LC3B-206ENST00000564844 TMEM253P0C7T8 217 aa22.04■■□□□ 1.12
MAP1LC3B-206ENST00000564844 STX2P32856 288 aa22.04■■□□□ 1.12
MAP1LC3B-206ENST00000564844 FMO5P49326 533 aa22.04■■□□□ 1.12
MAP1LC3B-206ENST00000564844 C2CD6Q53TS8 623 aa22.04■■□□□ 1.12
MAP1LC3B-206ENST00000564844 PHLDB3Q6NSJ2 640 aa22.04■■□□□ 1.12
MAP1LC3B-206ENST00000564844 SPATA21Q7Z572 469 aa22.04■■□□□ 1.12
MAP1LC3B-206ENST00000564844 PARD3BQ8TEW8 1205 aa22.04■■□□□ 1.12
MAP1LC3B-206ENST00000564844 KIAA1551Q9HCM1 1747 aa22.04■■□□□ 1.12
MAP1LC3B-206ENST00000564844 PPP1R12AO14974 1030 aaPredicted RBP22.03■■□□□ 1.12
MAP1LC3B-206ENST00000564844 TPTE2Q6XPS3 522 aa22.03■■□□□ 1.12
MAP1LC3B-206ENST00000564844 TAOK1Q7L7X3 1001 aa22.03■■□□□ 1.12
MAP1LC3B-206ENST00000564844 TYW1Q9NV66 732 aaKnown RBP22.03■■□□□ 1.12
MAP1LC3B-206ENST00000564844 PDXKO00764 312 aa22.03■■□□□ 1.12
MAP1LC3B-206ENST00000564844 TARSP26639 723 aaKnown RBP22.03■■□□□ 1.12
MAP1LC3B-206ENST00000564844 SESN3P58005 492 aa22.03■■□□□ 1.12
MAP1LC3B-206ENST00000564844 DLG4P78352 724 aa22.03■■□□□ 1.12
MAP1LC3B-206ENST00000564844 ZNF543Q08ER8 600 aa22.03■■□□□ 1.12
MAP1LC3B-206ENST00000564844 MGAT5Q09328 741 aa22.03■■□□□ 1.12
MAP1LC3B-206ENST00000564844 CALCOCO2Q13137 446 aa22.03■■□□□ 1.12
MAP1LC3B-206ENST00000564844 NAP1L3Q99457 506 aaPredicted RBP22.03■■□□□ 1.12
MAP1LC3B-206ENST00000564844 HOMER3Q9NSC5 361 aa22.03■■□□□ 1.12
MAP1LC3B-206ENST00000564844 FAM13AO94988 1023 aa22.03■■□□□ 1.12
MAP1LC3B-206ENST00000564844 GSTA1P08263 222 aa22.03■■□□□ 1.12
MAP1LC3B-206ENST00000564844 ERFP50548 548 aa22.03■■□□□ 1.12
MAP1LC3B-206ENST00000564844 QRICH1Q2TAL8 776 aa22.03■■□□□ 1.12
MAP1LC3B-206ENST00000564844 PPP4R3CPQ6ZMV5 832 aa22.03■■□□□ 1.12
MAP1LC3B-206ENST00000564844 COL23A1Q86Y22 540 aaPredicted RBP22.03■■□□□ 1.12
MAP1LC3B-206ENST00000564844 NENFQ9UMX5 172 aa22.03■■□□□ 1.12
MAP1LC3B-206ENST00000564844 A0A0A6YYK5 440 aaPredicted RBP22.02■■□□□ 1.12
MAP1LC3B-206ENST00000564844 CFAP73A6NFT4 308 aa22.02■■□□□ 1.12
MAP1LC3B-206ENST00000564844 EML1O00423 815 aa22.02■■□□□ 1.12
MAP1LC3B-206ENST00000564844 VSTM1Q6UX27 236 aa22.02■■□□□ 1.12
MAP1LC3B-206ENST00000564844 INTS2Q9H0H0 1204 aaKnown RBP22.02■■□□□ 1.12
MAP1LC3B-206ENST00000564844 KCNMB3Q9NPA1 279 aa22.02■■□□□ 1.12
MAP1LC3B-206ENST00000564844 FAM187AA6NFU0 413 aa22.02■■□□□ 1.12
MAP1LC3B-206ENST00000564844 FAM86B1E9PN63 330 aa22.02■■□□□ 1.12
MAP1LC3B-206ENST00000564844 FAM86B2P0C5J1 330 aa22.02■■□□□ 1.12
MAP1LC3B-206ENST00000564844 ABL2P42684 1182 aa22.02■■□□□ 1.12
MAP1LC3B-206ENST00000564844 SEL1L2Q5TEA6 688 aa22.02■■□□□ 1.12
MAP1LC3B-206ENST00000564844 C9orf72Q96LT7 481 aa22.02■■□□□ 1.12
MAP1LC3B-206ENST00000564844 STK33Q9BYT3 514 aa22.02■■□□□ 1.12
MAP1LC3B-206ENST00000564844 ZBTB5O15062 677 aa22.01■■□□□ 1.11
MAP1LC3B-206ENST00000564844 ATP2A2P16615 1042 aaKnown RBP22.01■■□□□ 1.11
MAP1LC3B-206ENST00000564844 ZNF76P36508 570 aa22.01■■□□□ 1.11
MAP1LC3B-206ENST00000564844 GTF2IP78347 998 aa22.01■■□□□ 1.11
MAP1LC3B-206ENST00000564844 LACTBP83111 547 aaPredicted RBP22.01■■□□□ 1.11
MAP1LC3B-206ENST00000564844 ATP11AP98196 1134 aa22.01■■□□□ 1.11
MAP1LC3B-206ENST00000564844 DHX34Q14147 1143 aaKnown RBP22.01■■□□□ 1.11
MAP1LC3B-206ENST00000564844 GNPTABQ3T906 1256 aa22.01■■□□□ 1.11
MAP1LC3B-206ENST00000564844 ASPRV1Q53RT3 343 aa22.01■■□□□ 1.11
MAP1LC3B-206ENST00000564844 RPUSD2Q8IZ73 545 aaKnown RBP22.01■■□□□ 1.11
MAP1LC3B-206ENST00000564844 RPGRQ92834 1020 aaKnown RBP22.01■■□□□ 1.11
MAP1LC3B-206ENST00000564844 GPR88Q9GZN0 384 aa22.01■■□□□ 1.11
MAP1LC3B-206ENST00000564844 HAO1Q9UJM8 370 aa22.01■■□□□ 1.11
MAP1LC3B-206ENST00000564844 TOM1O60784 492 aa22.01■■□□□ 1.11
MAP1LC3B-206ENST00000564844 PIAS1O75925 651 aa22.01■■□□□ 1.11
MAP1LC3B-206ENST00000564844 PPP4CP60510 307 aa22.01■■□□□ 1.11
MAP1LC3B-206ENST00000564844 VSIG1Q86XK7 387 aa22.01■■□□□ 1.11
MAP1LC3B-206ENST00000564844 UBL4BQ8N7F7 174 aa22.01■■□□□ 1.11
MAP1LC3B-206ENST00000564844 ARMC2Q8NEN0 867 aa22.01■■□□□ 1.11
MAP1LC3B-206ENST00000564844 SLC5A4Q9NY91 659 aa22.01■■□□□ 1.11
MAP1LC3B-206ENST00000564844 PSMC2P35998 433 aaKnown RBP22■■□□□ 1.11
MAP1LC3B-206ENST00000564844 RHBDL3P58872 404 aa22■■□□□ 1.11
MAP1LC3B-206ENST00000564844 ARHGAP4P98171 946 aa22■■□□□ 1.11
MAP1LC3B-206ENST00000564844 CYP4F22Q6NT55 531 aa22■■□□□ 1.11
MAP1LC3B-206ENST00000564844 SPDYE1Q8NFV5 336 aaPredicted RBP22■■□□□ 1.11
MAP1LC3B-206ENST00000564844 HEMGNQ9BXL5 484 aa22■■□□□ 1.11
MAP1LC3B-206ENST00000564844 METTL14Q9HCE5 456 aaKnown RBP22■■□□□ 1.11
MAP1LC3B-206ENST00000564844 DCCP43146 1447 aa22■■□□□ 1.11
MAP1LC3B-206ENST00000564844 EXOC3O60645 756 aa22■■□□□ 1.11
MAP1LC3B-206ENST00000564844 CETPP11597 493 aa22■■□□□ 1.11
MAP1LC3B-206ENST00000564844 GJC1P36383 396 aa22■■□□□ 1.11
MAP1LC3B-206ENST00000564844 GCLMP48507 274 aa22■■□□□ 1.11
MAP1LC3B-206ENST00000564844 CLK2P49760 499 aaKnown RBP22■■□□□ 1.11
MAP1LC3B-206ENST00000564844 SLC8A3P57103 927 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms