RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 ZNF449Q6P9G9 518 aa17.52■□□□□ 0.4
LINC00554-201ENST00000564841 C16orf86Q6ZW13 317 aa17.52■□□□□ 0.4
LINC00554-201ENST00000564841 LARP4BQ92615 738 aaKnown RBP17.52■□□□□ 0.4
LINC00554-201ENST00000564841 CALML4Q96GE6 196 aa17.52■□□□□ 0.4
LINC00554-201ENST00000564841 IFT74Q96LB3 600 aa17.52■□□□□ 0.4
LINC00554-201ENST00000564841 PTPN22Q9Y2R2 807 aa17.52■□□□□ 0.4
LINC00554-201ENST00000564841 IGSF9BQ9UPX0 1349 aa17.52■□□□□ 0.39
LINC00554-201ENST00000564841 KIAA0391O15091 583 aaKnown RBP17.52■□□□□ 0.39
LINC00554-201ENST00000564841 ECE2O60344 883 aa17.52■□□□□ 0.39
LINC00554-201ENST00000564841 EPS15P42566 896 aa17.52■□□□□ 0.39
LINC00554-201ENST00000564841 LRRC63Q05C16 580 aa17.52■□□□□ 0.39
LINC00554-201ENST00000564841 SYN2Q92777 582 aaPredicted RBP17.52■□□□□ 0.39
LINC00554-201ENST00000564841 POP1Q99575 1024 aaKnown RBP17.52■□□□□ 0.39
LINC00554-201ENST00000564841 RNPEPL1Q9HAU8 725 aa17.52■□□□□ 0.39
LINC00554-201ENST00000564841 METTL5Q9NRN9 209 aaKnown RBP17.52■□□□□ 0.39
LINC00554-201ENST00000564841 AGTP01019 485 aa17.51■□□□□ 0.39
LINC00554-201ENST00000564841 CALB2P22676 271 aa17.51■□□□□ 0.39
LINC00554-201ENST00000564841 CRKP46108 304 aa17.51■□□□□ 0.39
LINC00554-201ENST00000564841 PTDSS1P48651 473 aaKnown RBP17.51■□□□□ 0.39
LINC00554-201ENST00000564841 FKBP3Q00688 224 aaKnown RBP17.51■□□□□ 0.39
LINC00554-201ENST00000564841 NONOQ15233 471 aaKnown RBP eCLIP17.51■□□□□ 0.39
LINC00554-201ENST00000564841 KIAA1755Q5JYT7 1200 aa17.51■□□□□ 0.39
LINC00554-201ENST00000564841 FLAD1Q8NFF5 587 aa17.51■□□□□ 0.39
LINC00554-201ENST00000564841 TSG101Q99816 390 aa17.51■□□□□ 0.39
LINC00554-201ENST00000564841 EDEM3Q9BZQ6 932 aa17.51■□□□□ 0.39
LINC00554-201ENST00000564841 RXFP1Q9HBX9 757 aa17.51■□□□□ 0.39
LINC00554-201ENST00000564841 GRHL1Q9NZI5 618 aa17.51■□□□□ 0.39
LINC00554-201ENST00000564841 TBK1Q9UHD2 729 aa17.51■□□□□ 0.39
LINC00554-201ENST00000564841 ARL2BPQ9Y2Y0 163 aa17.51■□□□□ 0.39
LINC00554-201ENST00000564841 CES2O00748 559 aa17.51■□□□□ 0.39
LINC00554-201ENST00000564841 FGFR1OPO95684 399 aaKnown RBP17.51■□□□□ 0.39
LINC00554-201ENST00000564841 TAL1P17542 331 aaPredicted RBP17.51■□□□□ 0.39
LINC00554-201ENST00000564841 PEX5P50542 639 aa17.51■□□□□ 0.39
LINC00554-201ENST00000564841 CCNG1P51959 295 aa17.51■□□□□ 0.39
LINC00554-201ENST00000564841 KCNH2Q12809 1159 aa17.51■□□□□ 0.39
LINC00554-201ENST00000564841 ZC2HC1CQ53FD0 456 aaPredicted RBP17.51■□□□□ 0.39
LINC00554-201ENST00000564841 C6orf118Q5T5N4 469 aa17.51■□□□□ 0.39
LINC00554-201ENST00000564841 VSTM1Q6UX27 236 aa17.51■□□□□ 0.39
LINC00554-201ENST00000564841 RPUSD2Q8IZ73 545 aaKnown RBP17.51■□□□□ 0.39
LINC00554-201ENST00000564841 MYOCDQ8IZQ8 938 aa17.51■□□□□ 0.39
LINC00554-201ENST00000564841 ARHGEF2Q92974 986 aaKnown RBP17.51■□□□□ 0.39
LINC00554-201ENST00000564841 CDK5RAP3Q96JB5 506 aa17.51■□□□□ 0.39
LINC00554-201ENST00000564841 CUEDC2Q9H467 287 aa17.51■□□□□ 0.39
LINC00554-201ENST00000564841 WDR35Q9P2L0 1181 aa17.51■□□□□ 0.39
LINC00554-201ENST00000564841 MARCH6O60337 910 aa17.5■□□□□ 0.39
LINC00554-201ENST00000564841 PYGBP11216 843 aa17.5■□□□□ 0.39
LINC00554-201ENST00000564841 ZDHHC14Q8IZN3 488 aa17.5■□□□□ 0.39
LINC00554-201ENST00000564841 FAM13CQ8NE31 585 aa17.5■□□□□ 0.39
LINC00554-201ENST00000564841 FBF1Q8TES7 1133 aa17.5■□□□□ 0.39
LINC00554-201ENST00000564841 MYLK2Q9H1R3 596 aa17.5■□□□□ 0.39
LINC00554-201ENST00000564841 CCDC134Q9H6E4 229 aa17.5■□□□□ 0.39
LINC00554-201ENST00000564841 SERPINB13Q9UIV8 391 aa17.5■□□□□ 0.39
LINC00554-201ENST00000564841 ASB3Q9Y575 518 aa17.5■□□□□ 0.39
LINC00554-201ENST00000564841 RAD17O75943 681 aa17.5■□□□□ 0.39
LINC00554-201ENST00000564841 EPHB2P29323 1055 aa17.5■□□□□ 0.39
LINC00554-201ENST00000564841 KCNJ1P48048 391 aa17.5■□□□□ 0.39
LINC00554-201ENST00000564841 SEPT2Q15019 361 aa17.5■□□□□ 0.39
LINC00554-201ENST00000564841 PIGOQ8TEQ8 1089 aa17.5■□□□□ 0.39
LINC00554-201ENST00000564841 SPOCK2Q92563 424 aa17.5■□□□□ 0.39
LINC00554-201ENST00000564841 ALG3Q92685 438 aa17.5■□□□□ 0.39
LINC00554-201ENST00000564841 TRIM4Q9C037 500 aa17.5■□□□□ 0.39
LINC00554-201ENST00000564841 UBE2OQ9C0C9 1292 aaKnown RBP17.5■□□□□ 0.39
LINC00554-201ENST00000564841 TDRD3Q9H7E2 651 aaKnown RBP17.5■□□□□ 0.39
LINC00554-201ENST00000564841 DDX3XO00571 662 aaKnown RBP eCLIP17.5■□□□□ 0.39
LINC00554-201ENST00000564841 RIPK2O43353 540 aa17.5■□□□□ 0.39
LINC00554-201ENST00000564841 GCLCP48506 637 aaPredicted RBP17.5■□□□□ 0.39
LINC00554-201ENST00000564841 GALCP54803 685 aa17.5■□□□□ 0.39
LINC00554-201ENST00000564841 PTENP60484 403 aa17.5■□□□□ 0.39
LINC00554-201ENST00000564841 SNAP25P60880 206 aa17.5■□□□□ 0.39
LINC00554-201ENST00000564841 TRIM59Q8IWR1 403 aa17.5■□□□□ 0.39
LINC00554-201ENST00000564841 LMNTD2Q8IXW0 634 aa17.5■□□□□ 0.39
LINC00554-201ENST00000564841 HES6Q96HZ4 224 aa17.5■□□□□ 0.39
LINC00554-201ENST00000564841 PAIP2Q9BPZ3 127 aaKnown RBP17.5■□□□□ 0.39
LINC00554-201ENST00000564841 GAKO14976 1311 aa17.49■□□□□ 0.39
LINC00554-201ENST00000564841 GOLGA6L10A0A0M3HER8 536 aa17.49■□□□□ 0.39
LINC00554-201ENST00000564841 UNC5CO95185 931 aa17.49■□□□□ 0.39
LINC00554-201ENST00000564841 GJB6O95452 261 aa17.49■□□□□ 0.39
LINC00554-201ENST00000564841 UCHL3P15374 230 aa17.49■□□□□ 0.39
LINC00554-201ENST00000564841 ATP6V1C1P21283 382 aa17.49■□□□□ 0.39
LINC00554-201ENST00000564841 MARCKSL1P49006 195 aa17.49■□□□□ 0.39
LINC00554-201ENST00000564841 ZCWPW2Q504Y3 356 aa17.49■□□□□ 0.39
LINC00554-201ENST00000564841 TTBK2Q6IQ55 1244 aa17.49■□□□□ 0.39
LINC00554-201ENST00000564841 APOBEC3HQ6NTF7 200 aaKnown RBP17.49■□□□□ 0.39
LINC00554-201ENST00000564841 MTHFD1LQ6UB35 978 aa17.49■□□□□ 0.39
LINC00554-201ENST00000564841 KCTD1Q719H9 257 aa17.49■□□□□ 0.39
LINC00554-201ENST00000564841 NEK8Q86SG6 692 aa17.49■□□□□ 0.39
LINC00554-201ENST00000564841 CCNJLQ8IV13 435 aa17.49■□□□□ 0.39
LINC00554-201ENST00000564841 NEDD1Q8NHV4 660 aa17.49■□□□□ 0.39
LINC00554-201ENST00000564841 STK32AQ8WU08 396 aa17.49■□□□□ 0.39
LINC00554-201ENST00000564841 ERP27Q96DN0 273 aa17.49■□□□□ 0.39
LINC00554-201ENST00000564841 TGS1Q96RS0 853 aaKnown RBP17.49■□□□□ 0.39
LINC00554-201ENST00000564841 DDX50Q9BQ39 737 aaKnown RBP17.49■□□□□ 0.39
LINC00554-201ENST00000564841 GORASP1Q9BQQ3 440 aa17.49■□□□□ 0.39
LINC00554-201ENST00000564841 RGL1Q9NZL6 768 aa17.49■□□□□ 0.39
LINC00554-201ENST00000564841 SUCLA2Q9P2R7 463 aaPredicted RBP17.49■□□□□ 0.39
LINC00554-201ENST00000564841 SEC63Q9UGP8 760 aaKnown RBP17.49■□□□□ 0.39
LINC00554-201ENST00000564841 RPS6KL1Q9Y6S9 549 aa17.49■□□□□ 0.39
LINC00554-201ENST00000564841 PFASO15067 1338 aa17.49■□□□□ 0.39
LINC00554-201ENST00000564841 H2AFZP0C0S5 128 aa17.49■□□□□ 0.39
LINC00554-201ENST00000564841 ERFP50548 548 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms