RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 ZBP1Q9H171 429 aa20.63■□□□□ 0.89
CLN6-204ENST00000564752 INPP5FQ9Y2H2 1132 aa20.63■□□□□ 0.89
CLN6-204ENST00000564752 IRAK3Q9Y616 596 aa20.63■□□□□ 0.89
CLN6-204ENST00000564752 TMEM221A6NGB7 291 aa20.62■□□□□ 0.89
CLN6-204ENST00000564752 M0R296 226 aa20.62■□□□□ 0.89
CLN6-204ENST00000564752 GAS2O43903 313 aaKnown RBP20.62■□□□□ 0.89
CLN6-204ENST00000564752 HMGN5P82970 282 aaKnown RBP20.62■□□□□ 0.89
CLN6-204ENST00000564752 GUCY1B3Q02153 619 aa20.62■□□□□ 0.89
CLN6-204ENST00000564752 RNASELQ05823 741 aaKnown RBP20.62■□□□□ 0.89
CLN6-204ENST00000564752 EMC2Q15006 297 aa20.62■□□□□ 0.89
CLN6-204ENST00000564752 RABEP1Q15276 862 aa20.62■□□□□ 0.89
CLN6-204ENST00000564752 TPRNQ4KMQ1 711 aa20.62■□□□□ 0.89
CLN6-204ENST00000564752 XKR9Q5GH70 373 aa20.62■□□□□ 0.89
CLN6-204ENST00000564752 AGMOQ6ZNB7 445 aa20.62■□□□□ 0.89
CLN6-204ENST00000564752 TCP11Q8WWU5 503 aa20.62■□□□□ 0.89
CLN6-204ENST00000564752 C8orf76Q96K31 380 aa20.62■□□□□ 0.89
CLN6-204ENST00000564752 CTSAP10619 480 aa20.61■□□□□ 0.89
CLN6-204ENST00000564752 MRE11P49959 708 aa20.61■□□□□ 0.89
CLN6-204ENST00000564752 NHLH1Q02575 133 aa20.61■□□□□ 0.89
CLN6-204ENST00000564752 CYP4A11Q02928 519 aa20.61■□□□□ 0.89
CLN6-204ENST00000564752 ITIH3Q06033 890 aa20.61■□□□□ 0.89
CLN6-204ENST00000564752 UBXN11Q5T124 520 aa20.61■□□□□ 0.89
CLN6-204ENST00000564752 FERMT3Q86UX7 667 aa20.61■□□□□ 0.89
CLN6-204ENST00000564752 ZNF280BQ86YH2 543 aa20.61■□□□□ 0.89
CLN6-204ENST00000564752 TPH2Q8IWU9 490 aa20.61■□□□□ 0.89
CLN6-204ENST00000564752 FAM184AQ8NB25 1140 aa20.61■□□□□ 0.89
CLN6-204ENST00000564752 RNF149Q8NC42 400 aa20.61■□□□□ 0.89
CLN6-204ENST00000564752 BCL7CQ8WUZ0 217 aaPredicted RBP20.61■□□□□ 0.89
CLN6-204ENST00000564752 HSD17B14Q9BPX1 270 aa20.61■□□□□ 0.89
CLN6-204ENST00000564752 ADAM7Q9H2U9 754 aa20.61■□□□□ 0.89
CLN6-204ENST00000564752 BMP2KQ9NSY1 1161 aaPredicted RBP20.61■□□□□ 0.89
CLN6-204ENST00000564752 DNAJB4Q9UDY4 337 aa20.61■□□□□ 0.89
CLN6-204ENST00000564752 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.6■□□□□ 0.89
CLN6-204ENST00000564752 ST18O60284 1047 aa20.6■□□□□ 0.89
CLN6-204ENST00000564752 NEMFO60524 1076 aa20.6■□□□□ 0.89
CLN6-204ENST00000564752 LYPLA2O95372 231 aa20.6■□□□□ 0.89
CLN6-204ENST00000564752 CA8P35219 290 aa20.6■□□□□ 0.89
CLN6-204ENST00000564752 SLC11A1P49279 550 aa20.6■□□□□ 0.89
CLN6-204ENST00000564752 GIT2Q14161 759 aa20.6■□□□□ 0.89
CLN6-204ENST00000564752 CALCRLQ16602 461 aa20.6■□□□□ 0.89
CLN6-204ENST00000564752 AUTS2Q8WXX7 1259 aa20.6■□□□□ 0.89
CLN6-204ENST00000564752 PBXIP1Q96AQ6 731 aa20.6■□□□□ 0.89
CLN6-204ENST00000564752 EIF2AK1Q9BQI3 630 aaKnown RBP20.6■□□□□ 0.89
CLN6-204ENST00000564752 GBP3Q9H0R5 595 aa20.6■□□□□ 0.89
CLN6-204ENST00000564752 XPNPEP1Q9NQW7 623 aa20.6■□□□□ 0.89
CLN6-204ENST00000564752 PCDHA12Q9UN75 941 aa20.6■□□□□ 0.89
CLN6-204ENST00000564752 ARID2Q68CP9 1835 aa20.6■□□□□ 0.89
CLN6-204ENST00000564752 CNTNAP2Q9UHC6 1331 aa20.59■□□□□ 0.89
CLN6-204ENST00000564752 ZNF318Q5VUA4 2279 aa20.59■□□□□ 0.89
CLN6-204ENST00000564752 B4GALT3O60512 393 aa20.59■□□□□ 0.89
CLN6-204ENST00000564752 DDHD2O94830 711 aa20.59■□□□□ 0.89
CLN6-204ENST00000564752 AFF1P51825 1210 aaKnown RBP20.59■□□□□ 0.89
CLN6-204ENST00000564752 SIGLEC14Q08ET2 396 aa20.59■□□□□ 0.89
CLN6-204ENST00000564752 CES5AQ6NT32 575 aa20.59■□□□□ 0.89
CLN6-204ENST00000564752 URGCPQ8TCY9 931 aa20.59■□□□□ 0.89
CLN6-204ENST00000564752 NECTIN4Q96NY8 510 aa20.59■□□□□ 0.89
CLN6-204ENST00000564752 MTRQ99707 1265 aa20.59■□□□□ 0.89
CLN6-204ENST00000564752 VN1R3Q9BXE9 311 aa20.59■□□□□ 0.89
CLN6-204ENST00000564752 RSAD1Q9HA92 442 aa20.59■□□□□ 0.89
CLN6-204ENST00000564752 KANSL3Q9P2N6 904 aa20.59■□□□□ 0.89
CLN6-204ENST00000564752 CDH22Q9UJ99 828 aa20.59■□□□□ 0.89
CLN6-204ENST00000564752 NCLP19338 710 aaKnown RBP20.58■□□□□ 0.89
CLN6-204ENST00000564752 PTENP60484 403 aa20.58■□□□□ 0.89
CLN6-204ENST00000564752 POU5F1BQ06416 359 aa20.58■□□□□ 0.89
CLN6-204ENST00000564752 MXD4Q14582 209 aaPredicted RBP20.58■□□□□ 0.89
CLN6-204ENST00000564752 PCBP1Q15365 356 aaKnown RBP eCLIP20.58■□□□□ 0.89
CLN6-204ENST00000564752 PTPN21Q16825 1174 aa20.58■□□□□ 0.89
CLN6-204ENST00000564752 TMEM87AQ8NBN3 555 aa20.58■□□□□ 0.89
CLN6-204ENST00000564752 SMG8Q8ND04 991 aaKnown RBP20.58■□□□□ 0.89
CLN6-204ENST00000564752 SLC22A17Q8WUG5 538 aa20.58■□□□□ 0.89
CLN6-204ENST00000564752 NR2E1Q9Y466 385 aa20.58■□□□□ 0.89
CLN6-204ENST00000564752 WNT7AO00755 349 aa20.57■□□□□ 0.88
CLN6-204ENST00000564752 ALDH2P05091 517 aa20.57■□□□□ 0.88
CLN6-204ENST00000564752 EPCAMP16422 314 aa20.57■□□□□ 0.88
CLN6-204ENST00000564752 AXLP30530 894 aa20.57■□□□□ 0.88
CLN6-204ENST00000564752 GNL2Q13823 731 aaKnown RBP20.57■□□□□ 0.88
CLN6-204ENST00000564752 IFNLR1Q8IU57 520 aaPredicted RBP20.57■□□□□ 0.88
CLN6-204ENST00000564752 CNNM3Q8NE01 707 aa20.57■□□□□ 0.88
CLN6-204ENST00000564752 ASIC4Q96FT7 647 aa20.57■□□□□ 0.88
CLN6-204ENST00000564752 TMEM175Q9BSA9 504 aa20.57■□□□□ 0.88
CLN6-204ENST00000564752 POMKQ9H5K3 350 aa20.57■□□□□ 0.88
CLN6-204ENST00000564752 TTC12Q9H892 705 aaPredicted RBP20.57■□□□□ 0.88
CLN6-204ENST00000564752 UBN1Q9NPG3 1134 aa20.57■□□□□ 0.88
CLN6-204ENST00000564752 ANKEF1Q9NU02 776 aa20.57■□□□□ 0.88
CLN6-204ENST00000564752 DZANK1Q9NVP4 752 aa20.57■□□□□ 0.88
CLN6-204ENST00000564752 STK39Q9UEW8 545 aa20.57■□□□□ 0.88
CLN6-204ENST00000564752 TSPAN1O60635 241 aa20.56■□□□□ 0.88
CLN6-204ENST00000564752 DGAT1O75907 488 aa20.56■□□□□ 0.88
CLN6-204ENST00000564752 ERLIN2O94905 339 aa20.56■□□□□ 0.88
CLN6-204ENST00000564752 ATP2B1P20020 1258 aa20.56■□□□□ 0.88
CLN6-204ENST00000564752 SP100P23497 879 aaPredicted RBP20.56■□□□□ 0.88
CLN6-204ENST00000564752 MTHFRP42898 656 aa20.56■□□□□ 0.88
CLN6-204ENST00000564752 PTPN14Q15678 1187 aa20.56■□□□□ 0.88
CLN6-204ENST00000564752 C12orf76Q8N812 135 aaPredicted RBP20.56■□□□□ 0.88
CLN6-204ENST00000564752 FBXO18Q8NFZ0 1043 aa20.56■□□□□ 0.88
CLN6-204ENST00000564752 RIPOR3Q96MK2 946 aa20.56■□□□□ 0.88
CLN6-204ENST00000564752 FAM193BQ96PV7 902 aaPredicted RBP20.56■□□□□ 0.88
CLN6-204ENST00000564752 MTMR9Q96QG7 549 aa20.56■□□□□ 0.88
CLN6-204ENST00000564752 FOXP1Q9H334 677 aaPredicted RBP20.56■□□□□ 0.88
CLN6-204ENST00000564752 FAN1Q9Y2M0 1017 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms