RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 WDR11Q9BZH6 1224 aa16.71■□□□□ 0.26
GTF3C1-205ENST00000564747 KCND2Q9NZV8 630 aa16.71■□□□□ 0.26
GTF3C1-205ENST00000564747 ATRNL1Q5VV63 1379 aa16.71■□□□□ 0.26
GTF3C1-205ENST00000564747 PMS2P54278 862 aa16.7■□□□□ 0.26
GTF3C1-205ENST00000564747 FKBP1AP62942 108 aaKnown RBP16.7■□□□□ 0.26
GTF3C1-205ENST00000564747 ACTN3Q08043 901 aaPredicted RBP16.7■□□□□ 0.26
GTF3C1-205ENST00000564747 PPP2R5EQ16537 467 aa16.7■□□□□ 0.26
GTF3C1-205ENST00000564747 UBAP2Q5T6F2 1119 aaKnown RBP16.7■□□□□ 0.26
GTF3C1-205ENST00000564747 B3GNT9Q6UX72 402 aa16.7■□□□□ 0.26
GTF3C1-205ENST00000564747 COL23A1Q86Y22 540 aaPredicted RBP16.7■□□□□ 0.26
GTF3C1-205ENST00000564747 FMNL3Q8IVF7 1028 aa16.7■□□□□ 0.26
GTF3C1-205ENST00000564747 PRELID2Q8N945 189 aa16.7■□□□□ 0.26
GTF3C1-205ENST00000564747 RNF25Q96BH1 459 aaPredicted RBP16.7■□□□□ 0.26
GTF3C1-205ENST00000564747 SEC16BQ96JE7 1060 aa16.7■□□□□ 0.26
GTF3C1-205ENST00000564747 CBWD1Q9BRT8 395 aa16.7■□□□□ 0.26
GTF3C1-205ENST00000564747 TEKT3Q9BXF9 490 aa16.7■□□□□ 0.26
GTF3C1-205ENST00000564747 ACP6Q9NPH0 428 aa16.7■□□□□ 0.26
GTF3C1-205ENST00000564747 FAM187AA6NFU0 413 aa16.7■□□□□ 0.26
GTF3C1-205ENST00000564747 ENTPD3O75355 529 aa16.7■□□□□ 0.26
GTF3C1-205ENST00000564747 MMP10P09238 476 aa16.7■□□□□ 0.26
GTF3C1-205ENST00000564747 PAEPP09466 180 aa16.7■□□□□ 0.26
GTF3C1-205ENST00000564747 EIF3BP55884 814 aaKnown RBP16.7■□□□□ 0.26
GTF3C1-205ENST00000564747 DHX34Q14147 1143 aaKnown RBP16.7■□□□□ 0.26
GTF3C1-205ENST00000564747 MESDQ14696 234 aa16.7■□□□□ 0.26
GTF3C1-205ENST00000564747 SPRED3Q2MJR0 410 aa16.7■□□□□ 0.26
GTF3C1-205ENST00000564747 PADI6Q6TGC4 694 aa16.7■□□□□ 0.26
GTF3C1-205ENST00000564747 CCDC13Q8IYE1 715 aa16.7■□□□□ 0.26
GTF3C1-205ENST00000564747 SH2D3AQ9BRG2 576 aa16.7■□□□□ 0.26
GTF3C1-205ENST00000564747 TLDC2A0PJX2 215 aa16.69■□□□□ 0.26
GTF3C1-205ENST00000564747 ATMINO43313 823 aaPredicted RBP16.69■□□□□ 0.26
GTF3C1-205ENST00000564747 MUTP22033 750 aa16.69■□□□□ 0.26
GTF3C1-205ENST00000564747 PTGIRP43119 386 aa16.69■□□□□ 0.26
GTF3C1-205ENST00000564747 VAMP7P51809 220 aa16.69■□□□□ 0.26
GTF3C1-205ENST00000564747 PCDHB18PQ96TA0 734 aa16.69■□□□□ 0.26
GTF3C1-205ENST00000564747 OSBPL7Q9BZF2 842 aa16.69■□□□□ 0.26
GTF3C1-205ENST00000564747 PABPC3Q9H361 631 aaKnown RBP16.69■□□□□ 0.26
GTF3C1-205ENST00000564747 VCPKMTQ9H867 229 aa16.69■□□□□ 0.26
GTF3C1-205ENST00000564747 ARHGEF10LQ9HCE6 1279 aa16.69■□□□□ 0.26
GTF3C1-205ENST00000564747 TMX2Q9Y320 296 aa16.69■□□□□ 0.26
GTF3C1-205ENST00000564747 AFF2P51816 1311 aa16.69■□□□□ 0.26
GTF3C1-205ENST00000564747 TCP10L2B9ZVM9 353 aa16.69■□□□□ 0.26
GTF3C1-205ENST00000564747 SGPL1O95470 568 aa16.69■□□□□ 0.26
GTF3C1-205ENST00000564747 COMTP21964 271 aa16.69■□□□□ 0.26
GTF3C1-205ENST00000564747 HADHBP55084 474 aaKnown RBP16.69■□□□□ 0.26
GTF3C1-205ENST00000564747 GPC5P78333 572 aa16.69■□□□□ 0.26
GTF3C1-205ENST00000564747 BYSLQ13895 437 aaKnown RBP16.69■□□□□ 0.26
GTF3C1-205ENST00000564747 C1orf220Q5T0J3 134 aa16.69■□□□□ 0.26
GTF3C1-205ENST00000564747 TTC27Q6P3X3 843 aa16.69■□□□□ 0.26
GTF3C1-205ENST00000564747 CCDC121Q6ZUS5 278 aa16.69■□□□□ 0.26
GTF3C1-205ENST00000564747 INTS8Q75QN2 995 aaKnown RBP16.69■□□□□ 0.26
GTF3C1-205ENST00000564747 CPNE8Q86YQ8 564 aa16.69■□□□□ 0.26
GTF3C1-205ENST00000564747 C3orf20Q8ND61 904 aa16.69■□□□□ 0.26
GTF3C1-205ENST00000564747 PLEKHO2Q8TD55 490 aa16.69■□□□□ 0.26
GTF3C1-205ENST00000564747 ZSWIM1Q9BR11 485 aa16.69■□□□□ 0.26
GTF3C1-205ENST00000564747 GRHL1Q9NZI5 618 aa16.69■□□□□ 0.26
GTF3C1-205ENST00000564747 RBBP6Q7Z6E9 1792 aaKnown RBP16.68■□□□□ 0.26
GTF3C1-205ENST00000564747 LOC102724159A0A0B4J2E5 919 aa16.68■□□□□ 0.26
GTF3C1-205ENST00000564747 SMIM23A6NLE4 172 aa16.68■□□□□ 0.26
GTF3C1-205ENST00000564747 RPL21P46778 160 aaKnown RBP16.68■□□□□ 0.26
GTF3C1-205ENST00000564747 SLC29A2Q14542 456 aa16.68■□□□□ 0.26
GTF3C1-205ENST00000564747 PWP2Q15269 919 aaKnown RBP16.68■□□□□ 0.26
GTF3C1-205ENST00000564747 AOC3Q16853 763 aa16.68■□□□□ 0.26
GTF3C1-205ENST00000564747 SPDYCQ5MJ68 293 aa16.68■□□□□ 0.26
GTF3C1-205ENST00000564747 UBL4BQ8N7F7 174 aa16.68■□□□□ 0.26
GTF3C1-205ENST00000564747 NEK9Q8TD19 979 aa16.68■□□□□ 0.26
GTF3C1-205ENST00000564747 RANBP17Q9H2T7 1088 aaKnown RBP16.68■□□□□ 0.26
GTF3C1-205ENST00000564747 FBXO28Q9NVF7 368 aa16.68■□□□□ 0.26
GTF3C1-205ENST00000564747 TCRBV7S2A1N4TA0A589 114 aa16.68■□□□□ 0.26
GTF3C1-205ENST00000564747 PHF2O75151 1096 aa16.68■□□□□ 0.26
GTF3C1-205ENST00000564747 ITGB5P18084 799 aa16.68■□□□□ 0.26
GTF3C1-205ENST00000564747 RFX1P22670 979 aa16.68■□□□□ 0.26
GTF3C1-205ENST00000564747 PEX5P50542 639 aa16.68■□□□□ 0.26
GTF3C1-205ENST00000564747 DRG2P55039 364 aaKnown RBP16.68■□□□□ 0.26
GTF3C1-205ENST00000564747 TRAF1Q13077 416 aa16.68■□□□□ 0.26
GTF3C1-205ENST00000564747 CC2D2BQ6DHV5 1058 aa16.68■□□□□ 0.26
GTF3C1-205ENST00000564747 C11orf63Q6NUN7 778 aa16.68■□□□□ 0.26
GTF3C1-205ENST00000564747 TRMT1LQ7Z2T5 733 aaKnown RBP16.68■□□□□ 0.26
GTF3C1-205ENST00000564747 CPLX4Q7Z7G2 160 aa16.68■□□□□ 0.26
GTF3C1-205ENST00000564747 UHMK1Q8TAS1 419 aaKnown RBP16.68■□□□□ 0.26
GTF3C1-205ENST00000564747 TATDN2Q93075 761 aa16.68■□□□□ 0.26
GTF3C1-205ENST00000564747 BTBD6Q96KE9 485 aa16.68■□□□□ 0.26
GTF3C1-205ENST00000564747 SEMA4AQ9H3S1 761 aa16.68■□□□□ 0.26
GTF3C1-205ENST00000564747 MRPL11Q9Y3B7 192 aaKnown RBP16.68■□□□□ 0.26
GTF3C1-205ENST00000564747 RPTORQ8N122 1335 aa16.68■□□□□ 0.26
GTF3C1-205ENST00000564747 SLX4Q8IY92 1834 aa16.68■□□□□ 0.26
GTF3C1-205ENST00000564747 C5orf60A6NFR6 353 aa16.67■□□□□ 0.26
GTF3C1-205ENST00000564747 MIF4GDA9UHW6 222 aaKnown RBP16.67■□□□□ 0.26
GTF3C1-205ENST00000564747 DNM1LO00429 736 aa16.67■□□□□ 0.26
GTF3C1-205ENST00000564747 NUDT17P0C025 328 aa16.67■□□□□ 0.26
GTF3C1-205ENST00000564747 PYGMP11217 842 aa16.67■□□□□ 0.26
GTF3C1-205ENST00000564747 TBC1D10BQ4KMP7 808 aaPredicted RBP16.67■□□□□ 0.26
GTF3C1-205ENST00000564747 EPC2Q52LR7 807 aa16.67■□□□□ 0.26
GTF3C1-205ENST00000564747 DENND2CQ68D51 928 aa16.67■□□□□ 0.26
GTF3C1-205ENST00000564747 RASAL2Q9UJF2 1139 aa16.67■□□□□ 0.26
GTF3C1-205ENST00000564747 SYNGAP1Q96PV0 1343 aa16.67■□□□□ 0.26
GTF3C1-205ENST00000564747 COL11A2P13942 1736 aaPredicted RBP16.67■□□□□ 0.26
GTF3C1-205ENST00000564747 CHRNB2P17787 502 aa16.67■□□□□ 0.26
GTF3C1-205ENST00000564747 CHRNA3P32297 505 aa16.67■□□□□ 0.26
GTF3C1-205ENST00000564747 MAP2K2P36507 400 aa16.67■□□□□ 0.26
GTF3C1-205ENST00000564747 GSCP56915 257 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms