RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 U2AF1Q01081 240 aaKnown RBP eCLIP6.22□□□□□ -1.41
CDH1-207ENST00000564745 ADAM15Q13444 863 aa6.22□□□□□ -1.41
CDH1-207ENST00000564745 ACAP1Q15027 740 aa6.22□□□□□ -1.41
CDH1-207ENST00000564745 UBE3CQ15386 1083 aa6.22□□□□□ -1.41
CDH1-207ENST00000564745 VMACQ2NL98 169 aa6.22□□□□□ -1.41
CDH1-207ENST00000564745 TRIM68Q6AZZ1 485 aa6.22□□□□□ -1.41
CDH1-207ENST00000564745 MCTP2Q6DN12 878 aa6.22□□□□□ -1.41
CDH1-207ENST00000564745 KSR2Q6VAB6 950 aa6.22□□□□□ -1.41
CDH1-207ENST00000564745 GPR155Q7Z3F1 870 aa6.22□□□□□ -1.41
CDH1-207ENST00000564745 MSL3Q8N5Y2 521 aaKnown RBP6.22□□□□□ -1.41
CDH1-207ENST00000564745 MVB12AQ96EY5 273 aa6.22□□□□□ -1.41
CDH1-207ENST00000564745 YTHDC1Q96MU7 727 aaKnown RBP6.22□□□□□ -1.41
CDH1-207ENST00000564745 ADI1Q9BV57 179 aa6.22□□□□□ -1.41
CDH1-207ENST00000564745 FBXO10Q9UK96 956 aa6.22□□□□□ -1.41
CDH1-207ENST00000564745 PCDHA13Q9Y5I0 950 aa6.22□□□□□ -1.41
CDH1-207ENST00000564745 C2orf78A6NCI8 922 aa6.21□□□□□ -1.42
CDH1-207ENST00000564745 CTNND1O60716 968 aaKnown RBP6.21□□□□□ -1.42
CDH1-207ENST00000564745 PRAMEF4O60810 478 aa6.21□□□□□ -1.42
CDH1-207ENST00000564745 CAND2O75155 1236 aa6.21□□□□□ -1.42
CDH1-207ENST00000564745 WASP42768 502 aa6.21□□□□□ -1.42
CDH1-207ENST00000564745 GBX1Q14549 363 aa6.21□□□□□ -1.42
CDH1-207ENST00000564745 PCOLCEQ15113 449 aa6.21□□□□□ -1.42
CDH1-207ENST00000564745 ZNF648Q5T619 568 aaPredicted RBP6.21□□□□□ -1.42
CDH1-207ENST00000564745 Q6ZUG5 572 aa6.21□□□□□ -1.42
CDH1-207ENST00000564745 Q6ZVL8 140 aa6.21□□□□□ -1.42
CDH1-207ENST00000564745 HOXB13Q92826 284 aaPredicted RBP6.21□□□□□ -1.42
CDH1-207ENST00000564745 FAM84AQ96KN4 292 aa6.21□□□□□ -1.42
CDH1-207ENST00000564745 MAP3K14Q99558 947 aa6.21□□□□□ -1.42
CDH1-207ENST00000564745 OSBPL6Q9BZF3 934 aa6.21□□□□□ -1.42
CDH1-207ENST00000564745 ARNT2Q9HBZ2 717 aa6.21□□□□□ -1.42
CDH1-207ENST00000564745 CHST12Q9NRB3 414 aa6.21□□□□□ -1.42
CDH1-207ENST00000564745 RBM12Q9NTZ6 932 aaKnown RBP6.21□□□□□ -1.42
CDH1-207ENST00000564745 RCAN3Q9UKA8 241 aa6.21□□□□□ -1.42
CDH1-207ENST00000564745 FRMPD2Q68DX3 1309 aaPredicted RBP6.21□□□□□ -1.42
CDH1-207ENST00000564745 AKR1B10O60218 316 aa6.2□□□□□ -1.42
CDH1-207ENST00000564745 ALDH2P05091 517 aa6.2□□□□□ -1.42
CDH1-207ENST00000564745 KRT18P05783 430 aaKnown RBP6.2□□□□□ -1.42
CDH1-207ENST00000564745 MRE11P49959 708 aa6.2□□□□□ -1.42
CDH1-207ENST00000564745 MGAT2Q10469 447 aa6.2□□□□□ -1.42
CDH1-207ENST00000564745 TBR1Q16650 682 aa6.2□□□□□ -1.42
CDH1-207ENST00000564745 OVCH2Q7RTZ1 564 aa6.2□□□□□ -1.42
CDH1-207ENST00000564745 CLEC14AQ86T13 490 aa6.2□□□□□ -1.42
CDH1-207ENST00000564745 RTKN2Q8IZC4 609 aa6.2□□□□□ -1.42
CDH1-207ENST00000564745 MARCH10Q8NA82 808 aaPredicted RBP6.2□□□□□ -1.42
CDH1-207ENST00000564745 GPR156Q8NFN8 814 aa6.2□□□□□ -1.42
CDH1-207ENST00000564745 DACT3Q96B18 629 aaPredicted RBP6.2□□□□□ -1.42
CDH1-207ENST00000564745 KATNBL1Q9H079 304 aa6.2□□□□□ -1.42
CDH1-207ENST00000564745 CD320Q9NPF0 282 aa6.2□□□□□ -1.42
CDH1-207ENST00000564745 PRDM11Q9NQV5 511 aa6.2□□□□□ -1.42
CDH1-207ENST00000564745 ING3Q9NXR8 418 aa6.2□□□□□ -1.42
CDH1-207ENST00000564745 NTMQ9P121 344 aa6.2□□□□□ -1.42
CDH1-207ENST00000564745 FAM184BQ9ULE4 1060 aa6.2□□□□□ -1.42
CDH1-207ENST00000564745 SIK3Q9Y2K2 1263 aa6.2□□□□□ -1.42
CDH1-207ENST00000564745 SH3D21A4FU49 640 aa6.19□□□□□ -1.42
CDH1-207ENST00000564745 TCAF2A6NFQ2 919 aa6.19□□□□□ -1.42
CDH1-207ENST00000564745 ERC2O15083 957 aa6.19□□□□□ -1.42
CDH1-207ENST00000564745 FSBPO95073 299 aa6.19□□□□□ -1.42
CDH1-207ENST00000564745 LTA4HP09960 611 aaKnown RBP6.19□□□□□ -1.42
CDH1-207ENST00000564745 CSF2RBP32927 897 aa6.19□□□□□ -1.42
CDH1-207ENST00000564745 TXKP42681 527 aa6.19□□□□□ -1.42
CDH1-207ENST00000564745 SLC6A9P48067 706 aa6.19□□□□□ -1.42
CDH1-207ENST00000564745 SARSP49591 514 aaKnown RBP6.19□□□□□ -1.42
CDH1-207ENST00000564745 DSC2Q02487 901 aa6.19□□□□□ -1.42
CDH1-207ENST00000564745 LLGL1Q15334 1064 aa6.19□□□□□ -1.42
CDH1-207ENST00000564745 PGS1Q32NB8 556 aa6.19□□□□□ -1.42
CDH1-207ENST00000564745 CYB5RLQ6IPT4 315 aa6.19□□□□□ -1.42
CDH1-207ENST00000564745 CCSAPQ6IQ19 270 aaPredicted RBP6.19□□□□□ -1.42
CDH1-207ENST00000564745 KLHDC10Q6PID8 442 aa6.19□□□□□ -1.42
CDH1-207ENST00000564745 COL23A1Q86Y22 540 aaPredicted RBP6.19□□□□□ -1.42
CDH1-207ENST00000564745 IFNL2Q8IZJ0 200 aa6.19□□□□□ -1.42
CDH1-207ENST00000564745 ZDHHC14Q8IZN3 488 aa6.19□□□□□ -1.42
CDH1-207ENST00000564745 TP53I13Q8NBR0 393 aaPredicted RBP6.19□□□□□ -1.42
CDH1-207ENST00000564745 TXNDC5Q8NBS9 432 aaKnown RBP6.19□□□□□ -1.42
CDH1-207ENST00000564745 TMEM168Q9H0V1 697 aa6.19□□□□□ -1.42
CDH1-207ENST00000564745 TLR9Q9NR96 1032 aa6.19□□□□□ -1.42
CDH1-207ENST00000564745 PCDHB1Q9Y5F3 818 aa6.19□□□□□ -1.42
CDH1-207ENST00000564745 RPTORQ8N122 1335 aa6.19□□□□□ -1.42
CDH1-207ENST00000564745 LRRC14BA6NHZ5 514 aa6.18□□□□□ -1.42
CDH1-207ENST00000564745 WNT10BO00744 389 aa6.18□□□□□ -1.42
CDH1-207ENST00000564745 ADCY6O43306 1168 aa6.18□□□□□ -1.42
CDH1-207ENST00000564745 PEX14O75381 377 aa6.18□□□□□ -1.42
CDH1-207ENST00000564745 FARP2O94887 1054 aaPredicted RBP6.18□□□□□ -1.42
CDH1-207ENST00000564745 CYP1A1P04798 512 aaPredicted RBP6.18□□□□□ -1.42
CDH1-207ENST00000564745 USP14P54578 494 aa6.18□□□□□ -1.42
CDH1-207ENST00000564745 LINC00310P59036 64 aa6.18□□□□□ -1.42
CDH1-207ENST00000564745 MAN2A1Q16706 1144 aa6.18□□□□□ -1.42
CDH1-207ENST00000564745 RHOT1Q8IXI2 618 aa6.18□□□□□ -1.42
CDH1-207ENST00000564745 UNC5BQ8IZJ1 945 aa6.18□□□□□ -1.42
CDH1-207ENST00000564745 CARFQ8N187 725 aa6.18□□□□□ -1.42
CDH1-207ENST00000564745 CAMKK1Q8N5S9 505 aa6.18□□□□□ -1.42
CDH1-207ENST00000564745 LILRA3Q8N6C8 439 aaPredicted RBP6.18□□□□□ -1.42
CDH1-207ENST00000564745 FBXO18Q8NFZ0 1043 aa6.18□□□□□ -1.42
CDH1-207ENST00000564745 ADAMTS17Q8TE56 1095 aa6.18□□□□□ -1.42
CDH1-207ENST00000564745 SNX33Q8WV41 574 aa6.18□□□□□ -1.42
CDH1-207ENST00000564745 HDAC10Q969S8 669 aa6.18□□□□□ -1.42
CDH1-207ENST00000564745 AJUBAQ96IF1 538 aa6.18□□□□□ -1.42
CDH1-207ENST00000564745 UIMC1Q96RL1 719 aa6.18□□□□□ -1.42
CDH1-207ENST00000564745 LRFN3Q9BTN0 628 aa6.18□□□□□ -1.42
CDH1-207ENST00000564745 LDAHQ9H6V9 325 aa6.18□□□□□ -1.42
CDH1-207ENST00000564745 C1orf112Q9NSG2 853 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms