RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 CTSAP10619 480 aa13.57□□□□□ -0.24
GTF3C1-204ENST00000564664 NCLP19338 710 aaKnown RBP13.57□□□□□ -0.24
GTF3C1-204ENST00000564664 PTENP60484 403 aa13.57□□□□□ -0.24
GTF3C1-204ENST00000564664 CES5AQ6NT32 575 aa13.57□□□□□ -0.24
GTF3C1-204ENST00000564664 BMP8AQ7Z5Y6 402 aa13.57□□□□□ -0.24
GTF3C1-204ENST00000564664 PPFIBP1Q86W92 1011 aa13.57□□□□□ -0.24
GTF3C1-204ENST00000564664 VPS52Q8N1B4 723 aa13.57□□□□□ -0.24
GTF3C1-204ENST00000564664 ZSCAN31Q96LW9 406 aaPredicted RBP13.57□□□□□ -0.24
GTF3C1-204ENST00000564664 FAM193BQ96PV7 902 aaPredicted RBP13.57□□□□□ -0.24
GTF3C1-204ENST00000564664 NRDE2Q9H7Z3 1164 aa13.57□□□□□ -0.24
GTF3C1-204ENST00000564664 MUTYHQ9UIF7 546 aa13.57□□□□□ -0.24
GTF3C1-204ENST00000564664 CLASP2O75122 1294 aaKnown RBP13.56□□□□□ -0.24
GTF3C1-204ENST00000564664 ZC3H11AO75152 810 aaKnown RBP eCLIP13.56□□□□□ -0.24
GTF3C1-204ENST00000564664 LARGE1O95461 756 aa13.56□□□□□ -0.24
GTF3C1-204ENST00000564664 ARL2P36404 184 aa13.56□□□□□ -0.24
GTF3C1-204ENST00000564664 PBX3P40426 434 aa13.56□□□□□ -0.24
GTF3C1-204ENST00000564664 TXKP42681 527 aa13.56□□□□□ -0.24
GTF3C1-204ENST00000564664 CYP4A11Q02928 519 aa13.56□□□□□ -0.24
GTF3C1-204ENST00000564664 NOTUMQ6P988 496 aa13.56□□□□□ -0.24
GTF3C1-204ENST00000564664 SYCE2Q6PIF2 218 aa13.56□□□□□ -0.24
GTF3C1-204ENST00000564664 AGMOQ6ZNB7 445 aa13.56□□□□□ -0.24
GTF3C1-204ENST00000564664 LPPQ93052 612 aa13.56□□□□□ -0.24
GTF3C1-204ENST00000564664 ZBP1Q9H171 429 aa13.56□□□□□ -0.24
GTF3C1-204ENST00000564664 ADAM7Q9H2U9 754 aa13.56□□□□□ -0.24
GTF3C1-204ENST00000564664 MINDY3Q9H8M7 445 aa13.56□□□□□ -0.24
GTF3C1-204ENST00000564664 RSAD1Q9HA92 442 aa13.56□□□□□ -0.24
GTF3C1-204ENST00000564664 TUFT1Q9NNX1 390 aa13.56□□□□□ -0.24
GTF3C1-204ENST00000564664 DZANK1Q9NVP4 752 aa13.56□□□□□ -0.24
GTF3C1-204ENST00000564664 SSX2IPQ9Y2D8 614 aa13.56□□□□□ -0.24
GTF3C1-204ENST00000564664 NR2E1Q9Y466 385 aa13.56□□□□□ -0.24
GTF3C1-204ENST00000564664 FAM205CA6NFA0 338 aa13.55□□□□□ -0.24
GTF3C1-204ENST00000564664 NT5C1B-RDH14C9J2C7 533 aa13.55□□□□□ -0.24
GTF3C1-204ENST00000564664 ZBTB39O15060 712 aa13.55□□□□□ -0.24
GTF3C1-204ENST00000564664 INPPL1O15357 1258 aa13.55□□□□□ -0.24
GTF3C1-204ENST00000564664 MUTP22033 750 aa13.55□□□□□ -0.24
GTF3C1-204ENST00000564664 RARRES1P49788 294 aa13.55□□□□□ -0.24
GTF3C1-204ENST00000564664 HMGN5P82970 282 aaKnown RBP13.55□□□□□ -0.24
GTF3C1-204ENST00000564664 UBXN11Q5T124 520 aa13.55□□□□□ -0.24
GTF3C1-204ENST00000564664 HACE1Q8IYU2 909 aa13.55□□□□□ -0.24
GTF3C1-204ENST00000564664 CCDC43Q96MW1 224 aaKnown RBP13.55□□□□□ -0.24
GTF3C1-204ENST00000564664 NACC1Q96RE7 527 aa13.55□□□□□ -0.24
GTF3C1-204ENST00000564664 POLR3CQ9BUI4 534 aaPredicted RBP13.55□□□□□ -0.24
GTF3C1-204ENST00000564664 FOXP1Q9H334 677 aaPredicted RBP13.55□□□□□ -0.24
GTF3C1-204ENST00000564664 XPNPEP1Q9NQW7 623 aa13.55□□□□□ -0.24
GTF3C1-204ENST00000564664 DBR1Q9UK59 544 aaKnown RBP13.55□□□□□ -0.24
GTF3C1-204ENST00000564664 INPP5FQ9Y2H2 1132 aa13.55□□□□□ -0.24
GTF3C1-204ENST00000564664 FAN1Q9Y2M0 1017 aa13.55□□□□□ -0.24
GTF3C1-204ENST00000564664 HCFC2Q9Y5Z7 792 aa13.55□□□□□ -0.24
GTF3C1-204ENST00000564664 C5orf42Q9H799 3197 aa13.55□□□□□ -0.24
GTF3C1-204ENST00000564664 JAK2O60674 1132 aa13.54□□□□□ -0.24
GTF3C1-204ENST00000564664 NR1I2O75469 434 aa13.54□□□□□ -0.24
GTF3C1-204ENST00000564664 ITGA4P13612 1032 aa13.54□□□□□ -0.24
GTF3C1-204ENST00000564664 MTHFRP42898 656 aa13.54□□□□□ -0.24
GTF3C1-204ENST00000564664 TRAPPC10P48553 1259 aa13.54□□□□□ -0.24
GTF3C1-204ENST00000564664 RBM25P49756 843 aaKnown RBP13.54□□□□□ -0.24
GTF3C1-204ENST00000564664 ZXDAP98168 799 aa13.54□□□□□ -0.24
GTF3C1-204ENST00000564664 RBM10P98175 930 aaKnown RBP13.54□□□□□ -0.24
GTF3C1-204ENST00000564664 LLGL2Q6P1M3 1020 aa13.54□□□□□ -0.24
GTF3C1-204ENST00000564664 TRIM67Q6ZTA4 783 aa13.54□□□□□ -0.24
GTF3C1-204ENST00000564664 MCPH1Q8NEM0 835 aa13.54□□□□□ -0.24
GTF3C1-204ENST00000564664 ERMNQ8TAM6 284 aa13.54□□□□□ -0.24
GTF3C1-204ENST00000564664 C8orf76Q96K31 380 aa13.54□□□□□ -0.24
GTF3C1-204ENST00000564664 RPGRIP1Q96KN7 1286 aa13.54□□□□□ -0.24
GTF3C1-204ENST00000564664 RIPOR3Q96MK2 946 aa13.54□□□□□ -0.24
GTF3C1-204ENST00000564664 EMILIN2Q9BXX0 1053 aa13.54□□□□□ -0.24
GTF3C1-204ENST00000564664 CSRNP2Q9H175 543 aa13.54□□□□□ -0.24
GTF3C1-204ENST00000564664 SH2B1Q9NRF2 756 aaPredicted RBP13.54□□□□□ -0.24
GTF3C1-204ENST00000564664 GIT1Q9Y2X7 761 aa13.54□□□□□ -0.24
GTF3C1-204ENST00000564664 STK24Q9Y6E0 443 aa13.54□□□□□ -0.24
GTF3C1-204ENST00000564664 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.53□□□□□ -0.24
GTF3C1-204ENST00000564664 MEIS3P2A8K0S8 358 aa13.53□□□□□ -0.24
GTF3C1-204ENST00000564664 INO80B-WBP1J3KQ70 363 aa13.53□□□□□ -0.24
GTF3C1-204ENST00000564664 TSPAN1O60635 241 aa13.53□□□□□ -0.24
GTF3C1-204ENST00000564664 DTNBO60941 627 aa13.53□□□□□ -0.24
GTF3C1-204ENST00000564664 C1RP00736 705 aa13.53□□□□□ -0.24
GTF3C1-204ENST00000564664 SLC11A1P49279 550 aa13.53□□□□□ -0.24
GTF3C1-204ENST00000564664 LONRF3Q496Y0 759 aa13.53□□□□□ -0.24
GTF3C1-204ENST00000564664 ATAT1Q5SQI0 421 aa13.53□□□□□ -0.24
GTF3C1-204ENST00000564664 ZNF280BQ86YH2 543 aa13.53□□□□□ -0.24
GTF3C1-204ENST00000564664 FBXO18Q8NFZ0 1043 aa13.53□□□□□ -0.24
GTF3C1-204ENST00000564664 SLC22A17Q8WUG5 538 aa13.53□□□□□ -0.24
GTF3C1-204ENST00000564664 PRIMPOLQ96LW4 560 aa13.53□□□□□ -0.24
GTF3C1-204ENST00000564664 PRRX2Q99811 253 aa13.53□□□□□ -0.24
GTF3C1-204ENST00000564664 IPPQ9Y573 584 aa13.53□□□□□ -0.24
GTF3C1-204ENST00000564664 ZMYM2Q9UBW7 1377 aa13.53□□□□□ -0.24
GTF3C1-204ENST00000564664 MUC6Q6W4X9 2439 aa13.52□□□□□ -0.24
GTF3C1-204ENST00000564664 A0A1B0GUA9 196 aa13.52□□□□□ -0.25
GTF3C1-204ENST00000564664 DDHD2O94830 711 aa13.52□□□□□ -0.25
GTF3C1-204ENST00000564664 SEC24BO95487 1268 aa13.52□□□□□ -0.25
GTF3C1-204ENST00000564664 SPATA31C1P0DKV0 1188 aa13.52□□□□□ -0.25
GTF3C1-204ENST00000564664 GLRA2P23416 452 aa13.52□□□□□ -0.25
GTF3C1-204ENST00000564664 RPA1P27694 616 aa13.52□□□□□ -0.25
GTF3C1-204ENST00000564664 HOXD11P31277 338 aaPredicted RBP13.52□□□□□ -0.25
GTF3C1-204ENST00000564664 MCM7P33993 719 aa13.52□□□□□ -0.25
GTF3C1-204ENST00000564664 CA8P35219 290 aa13.52□□□□□ -0.25
GTF3C1-204ENST00000564664 MBTD1Q05BQ5 628 aa13.52□□□□□ -0.25
GTF3C1-204ENST00000564664 SIGLEC14Q08ET2 396 aa13.52□□□□□ -0.25
GTF3C1-204ENST00000564664 CAPSQ13938 189 aa13.52□□□□□ -0.25
GTF3C1-204ENST00000564664 HFE2Q6ZVN8 426 aa13.52□□□□□ -0.25
GTF3C1-204ENST00000564664 TMEM173Q86WV6 379 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms