RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 CSRNP2Q9H175 543 aa20.3■□□□□ 0.84
SYNGR3-204ENST00000564642 PRMT7Q9NVM4 692 aaPredicted RBP20.3■□□□□ 0.84
SYNGR3-204ENST00000564642 PUF60Q9UHX1 559 aaKnown RBP20.3■□□□□ 0.84
SYNGR3-204ENST00000564642 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.29■□□□□ 0.84
SYNGR3-204ENST00000564642 MEIS3P2A8K0S8 358 aa20.29■□□□□ 0.84
SYNGR3-204ENST00000564642 NCK2O43639 380 aa20.29■□□□□ 0.84
SYNGR3-204ENST00000564642 OFD1O75665 1012 aa20.29■□□□□ 0.84
SYNGR3-204ENST00000564642 ITGA4P13612 1032 aa20.29■□□□□ 0.84
SYNGR3-204ENST00000564642 ARF4P18085 180 aaPredicted RBP20.29■□□□□ 0.84
SYNGR3-204ENST00000564642 NCLP19338 710 aaKnown RBP20.29■□□□□ 0.84
SYNGR3-204ENST00000564642 PPM1AP35813 382 aa20.29■□□□□ 0.84
SYNGR3-204ENST00000564642 NAMPTP43490 491 aa20.29■□□□□ 0.84
SYNGR3-204ENST00000564642 ALDH7A1P49419 539 aaKnown RBP20.29■□□□□ 0.84
SYNGR3-204ENST00000564642 KRT17Q04695 432 aa20.29■□□□□ 0.84
SYNGR3-204ENST00000564642 RNASELQ05823 741 aaKnown RBP20.29■□□□□ 0.84
SYNGR3-204ENST00000564642 CAMK1Q14012 370 aa20.29■□□□□ 0.84
SYNGR3-204ENST00000564642 AMHR2Q16671 573 aa20.29■□□□□ 0.84
SYNGR3-204ENST00000564642 AGMOQ6ZNB7 445 aa20.29■□□□□ 0.84
SYNGR3-204ENST00000564642 KCTD17Q8N5Z5 321 aa20.29■□□□□ 0.84
SYNGR3-204ENST00000564642 URGCPQ8TCY9 931 aa20.29■□□□□ 0.84
SYNGR3-204ENST00000564642 PLIN2Q99541 437 aa20.29■□□□□ 0.84
SYNGR3-204ENST00000564642 UBE2ZQ9H832 354 aaPredicted RBP20.29■□□□□ 0.84
SYNGR3-204ENST00000564642 RSAD1Q9HA92 442 aa20.29■□□□□ 0.84
SYNGR3-204ENST00000564642 POLD4Q9HCU8 107 aa20.29■□□□□ 0.84
SYNGR3-204ENST00000564642 UBN1Q9NPG3 1134 aa20.29■□□□□ 0.84
SYNGR3-204ENST00000564642 SPG21Q9NZD8 308 aa20.29■□□□□ 0.84
SYNGR3-204ENST00000564642 CNTNAP2Q9UHC6 1331 aa20.28■□□□□ 0.84
SYNGR3-204ENST00000564642 MUC3AQ02505 3323 aa20.28■□□□□ 0.84
SYNGR3-204ENST00000564642 HSP90AA1P07900 732 aaKnown RBP20.28■□□□□ 0.84
SYNGR3-204ENST00000564642 UBA7P41226 1012 aa20.28■□□□□ 0.84
SYNGR3-204ENST00000564642 PLCB3Q01970 1234 aa20.28■□□□□ 0.84
SYNGR3-204ENST00000564642 MAPK6Q16659 721 aa20.28■□□□□ 0.84
SYNGR3-204ENST00000564642 TMEM132AQ24JP5 1023 aa20.28■□□□□ 0.84
SYNGR3-204ENST00000564642 HYIQ5T013 277 aa20.28■□□□□ 0.84
SYNGR3-204ENST00000564642 CDCA2Q69YH5 1023 aaPredicted RBP20.28■□□□□ 0.84
SYNGR3-204ENST00000564642 CABP7Q86V35 215 aa20.28■□□□□ 0.84
SYNGR3-204ENST00000564642 HACE1Q8IYU2 909 aa20.28■□□□□ 0.84
SYNGR3-204ENST00000564642 BSNDQ8WZ55 320 aa20.28■□□□□ 0.84
SYNGR3-204ENST00000564642 PRIMPOLQ96LW4 560 aa20.28■□□□□ 0.84
SYNGR3-204ENST00000564642 EIF2AQ9BY44 585 aaKnown RBP20.28■□□□□ 0.84
SYNGR3-204ENST00000564642 IGFLR1Q9H665 355 aa20.28■□□□□ 0.84
SYNGR3-204ENST00000564642 TLR9Q9NR96 1032 aa20.28■□□□□ 0.84
SYNGR3-204ENST00000564642 KANSL3Q9P2N6 904 aa20.28■□□□□ 0.84
SYNGR3-204ENST00000564642 IPPQ9Y573 584 aa20.28■□□□□ 0.84
SYNGR3-204ENST00000564642 TCF20Q9UGU0 1960 aaKnown RBP20.27■□□□□ 0.84
SYNGR3-204ENST00000564642 CARNS1A5YM72 827 aa20.27■□□□□ 0.84
SYNGR3-204ENST00000564642 B4GALT5O43286 388 aa20.27■□□□□ 0.84
SYNGR3-204ENST00000564642 STX6O43752 255 aa20.27■□□□□ 0.84
SYNGR3-204ENST00000564642 SSBP05455 408 aaKnown RBP eCLIP20.27■□□□□ 0.84
SYNGR3-204ENST00000564642 LIG1P18858 919 aa20.27■□□□□ 0.84
SYNGR3-204ENST00000564642 PBX3P40426 434 aa20.27■□□□□ 0.84
SYNGR3-204ENST00000564642 KCNQ1P51787 676 aa20.27■□□□□ 0.84
SYNGR3-204ENST00000564642 BCAR1P56945 870 aa20.27■□□□□ 0.84
SYNGR3-204ENST00000564642 RESTQ13127 1097 aa20.27■□□□□ 0.84
SYNGR3-204ENST00000564642 RINT1Q6NUQ1 792 aa20.27■□□□□ 0.84
SYNGR3-204ENST00000564642 SLC27A1Q6PCB7 646 aa20.27■□□□□ 0.84
SYNGR3-204ENST00000564642 PPP4R3CPQ6ZMV5 832 aa20.27■□□□□ 0.84
SYNGR3-204ENST00000564642 KCNK18Q7Z418 384 aa20.27■□□□□ 0.84
SYNGR3-204ENST00000564642 SMG8Q8ND04 991 aaKnown RBP20.27■□□□□ 0.84
SYNGR3-204ENST00000564642 MRPS27Q92552 414 aaKnown RBP20.27■□□□□ 0.84
SYNGR3-204ENST00000564642 PABPC5Q96DU9 382 aaKnown RBP20.27■□□□□ 0.84
SYNGR3-204ENST00000564642 CALML4Q96GE6 196 aa20.27■□□□□ 0.84
SYNGR3-204ENST00000564642 PNMA5Q96PV4 448 aa20.27■□□□□ 0.84
SYNGR3-204ENST00000564642 FAM193BQ96PV7 902 aaPredicted RBP20.27■□□□□ 0.84
SYNGR3-204ENST00000564642 FZD8Q9H461 694 aa20.27■□□□□ 0.84
SYNGR3-204ENST00000564642 TBC1D13Q9NVG8 400 aa20.27■□□□□ 0.84
SYNGR3-204ENST00000564642 CLDND1Q9NY35 253 aa20.27■□□□□ 0.84
SYNGR3-204ENST00000564642 LZTS1Q9Y250 596 aa20.27■□□□□ 0.84
SYNGR3-204ENST00000564642 CLIC4Q9Y696 253 aa20.27■□□□□ 0.84
SYNGR3-204ENST00000564642 A0A1B0GUA9 196 aa20.26■□□□□ 0.83
SYNGR3-204ENST00000564642 SLC26A4O43511 780 aa20.26■□□□□ 0.83
SYNGR3-204ENST00000564642 HIP1RO75146 1068 aa20.26■□□□□ 0.83
SYNGR3-204ENST00000564642 ZC3H11AO75152 810 aaKnown RBP eCLIP20.26■□□□□ 0.83
SYNGR3-204ENST00000564642 BMP1P13497 986 aa20.26■□□□□ 0.83
SYNGR3-204ENST00000564642 KCNA5P22460 613 aa20.26■□□□□ 0.83
SYNGR3-204ENST00000564642 IRS1P35568 1242 aa20.26■□□□□ 0.83
SYNGR3-204ENST00000564642 LONP1P36776 959 aaKnown RBP20.26■□□□□ 0.83
SYNGR3-204ENST00000564642 EFNA5P52803 228 aa20.26■□□□□ 0.83
SYNGR3-204ENST00000564642 HYAL1Q12794 435 aa20.26■□□□□ 0.83
SYNGR3-204ENST00000564642 PRPF4BQ13523 1007 aaKnown RBP20.26■□□□□ 0.83
SYNGR3-204ENST00000564642 FAM187BQ17R55 369 aa20.26■□□□□ 0.83
SYNGR3-204ENST00000564642 PDE12Q6L8Q7 609 aaKnown RBP20.26■□□□□ 0.83
SYNGR3-204ENST00000564642 C1orf186Q6ZWK4 172 aa20.26■□□□□ 0.83
SYNGR3-204ENST00000564642 RASSF8Q8NHQ8 419 aa20.26■□□□□ 0.83
SYNGR3-204ENST00000564642 DRC1Q96MC2 740 aa20.26■□□□□ 0.83
SYNGR3-204ENST00000564642 TIPINQ9BVW5 301 aa20.26■□□□□ 0.83
SYNGR3-204ENST00000564642 GBP3Q9H0R5 595 aa20.26■□□□□ 0.83
SYNGR3-204ENST00000564642 ZSCAN16Q9H4T2 348 aaPredicted RBP20.26■□□□□ 0.83
SYNGR3-204ENST00000564642 NRDE2Q9H7Z3 1164 aa20.26■□□□□ 0.83
SYNGR3-204ENST00000564642 MTMR6Q9Y217 621 aa20.26■□□□□ 0.83
SYNGR3-204ENST00000564642 REV3LO60673 3130 aa20.26■□□□□ 0.83
SYNGR3-204ENST00000564642 MYO7AQ13402 2215 aa20.25■□□□□ 0.83
SYNGR3-204ENST00000564642 CCDC169A6NNP5 214 aa20.25■□□□□ 0.83
SYNGR3-204ENST00000564642 NT5C1B-RDH14C9J2C7 533 aa20.25■□□□□ 0.83
SYNGR3-204ENST00000564642 NPTXRO95502 500 aa20.25■□□□□ 0.83
SYNGR3-204ENST00000564642 PRKCBP05771 671 aa20.25■□□□□ 0.83
SYNGR3-204ENST00000564642 CDR2LQ86X02 465 aaPredicted RBP20.25■□□□□ 0.83
SYNGR3-204ENST00000564642 SLC39A11Q8N1S5 342 aa20.25■□□□□ 0.83
SYNGR3-204ENST00000564642 SYT2Q8N9I0 419 aaPredicted RBP20.25■□□□□ 0.83
SYNGR3-204ENST00000564642 RUSC1Q9BVN2 902 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms