RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 TMEM175Q9BSA9 504 aa15.78■□□□□ 0.12
CDR2-204ENST00000564542 MFSD1Q9H3U5 465 aa15.78■□□□□ 0.12
CDR2-204ENST00000564542 RSAD1Q9HA92 442 aa15.78■□□□□ 0.12
CDR2-204ENST00000564542 ZSWIM6Q9HCJ5 1215 aa15.78■□□□□ 0.12
CDR2-204ENST00000564542 DMDP11532 3685 aa15.78■□□□□ 0.12
CDR2-204ENST00000564542 ARID2Q68CP9 1835 aa15.78■□□□□ 0.12
CDR2-204ENST00000564542 C2orf16Q68DN1 1984 aa15.77■□□□□ 0.12
CDR2-204ENST00000564542 SPDYE4A6NLX3 237 aa15.77■□□□□ 0.12
CDR2-204ENST00000564542 RFC5P40937 340 aa15.77■□□□□ 0.12
CDR2-204ENST00000564542 CLCN4P51793 760 aa15.77■□□□□ 0.12
CDR2-204ENST00000564542 NPEPPSP55786 919 aa15.77■□□□□ 0.12
CDR2-204ENST00000564542 OTOP3Q7RTS5 596 aa15.77■□□□□ 0.12
CDR2-204ENST00000564542 SRGAP1Q7Z6B7 1085 aa15.77■□□□□ 0.12
CDR2-204ENST00000564542 FEZF2Q8TBJ5 459 aa15.77■□□□□ 0.12
CDR2-204ENST00000564542 PSPC1Q8WXF1 523 aaKnown RBP15.77■□□□□ 0.12
CDR2-204ENST00000564542 ZNF274Q96GC6 653 aaPredicted RBP15.77■□□□□ 0.12
CDR2-204ENST00000564542 FAM20AQ96MK3 541 aa15.77■□□□□ 0.12
CDR2-204ENST00000564542 AIFM3Q96NN9 605 aa15.77■□□□□ 0.12
CDR2-204ENST00000564542 KLHL5Q96PQ7 755 aa15.77■□□□□ 0.12
CDR2-204ENST00000564542 DHX33Q9H6R0 707 aaKnown RBP15.77■□□□□ 0.12
CDR2-204ENST00000564542 KCNMB3Q9NPA1 279 aa15.77■□□□□ 0.12
CDR2-204ENST00000564542 KANSL3Q9P2N6 904 aa15.77■□□□□ 0.12
CDR2-204ENST00000564542 VPS13AQ96RL7 3174 aa15.77■□□□□ 0.11
CDR2-204ENST00000564542 EPB41L2O43491 1005 aaKnown RBP15.76■□□□□ 0.11
CDR2-204ENST00000564542 GAS2O43903 313 aaKnown RBP15.76■□□□□ 0.11
CDR2-204ENST00000564542 LILRB3O75022 631 aa15.76■□□□□ 0.11
CDR2-204ENST00000564542 DDHD2O94830 711 aa15.76■□□□□ 0.11
CDR2-204ENST00000564542 CNPP09543 421 aaKnown RBP15.76■□□□□ 0.11
CDR2-204ENST00000564542 KLRC2P26717 231 aa15.76■□□□□ 0.11
CDR2-204ENST00000564542 HOXA11P31270 313 aaPredicted RBP15.76■□□□□ 0.11
CDR2-204ENST00000564542 NBL1P41271 181 aa15.76■□□□□ 0.11
CDR2-204ENST00000564542 CLCN5P51795 746 aa15.76■□□□□ 0.11
CDR2-204ENST00000564542 AFF1P51825 1210 aaKnown RBP15.76■□□□□ 0.11
CDR2-204ENST00000564542 LETM2Q2VYF4 491 aa15.76■□□□□ 0.11
CDR2-204ENST00000564542 UBXN11Q5T124 520 aa15.76■□□□□ 0.11
CDR2-204ENST00000564542 CPLX2Q6PUV4 134 aaKnown RBP15.76■□□□□ 0.11
CDR2-204ENST00000564542 C15orf39Q6ZRI6 1047 aa15.76■□□□□ 0.11
CDR2-204ENST00000564542 ZNF579Q8NAF0 562 aaKnown RBP15.76■□□□□ 0.11
CDR2-204ENST00000564542 PRPF31Q8WWY3 499 aaKnown RBP15.76■□□□□ 0.11
CDR2-204ENST00000564542 CEP170P1Q96L14 293 aa15.76■□□□□ 0.11
CDR2-204ENST00000564542 FAM193BQ96PV7 902 aaPredicted RBP15.76■□□□□ 0.11
CDR2-204ENST00000564542 MINDY3Q9H8M7 445 aa15.76■□□□□ 0.11
CDR2-204ENST00000564542 MRPL17Q9NRX2 175 aaKnown RBP15.76■□□□□ 0.11
CDR2-204ENST00000564542 WRAP73Q9P2S5 460 aaPredicted RBP15.76■□□□□ 0.11
CDR2-204ENST00000564542 CYP46A1Q9Y6A2 500 aa15.76■□□□□ 0.11
CDR2-204ENST00000564542 CCDC194A0A1B0GVG4 234 aa15.75■□□□□ 0.11
CDR2-204ENST00000564542 POMCP01189 267 aa15.75■□□□□ 0.11
CDR2-204ENST00000564542 SOD2P04179 222 aa15.75■□□□□ 0.11
CDR2-204ENST00000564542 ALDH2P05091 517 aa15.75■□□□□ 0.11
CDR2-204ENST00000564542 SSBP05455 408 aaKnown RBP eCLIP15.75■□□□□ 0.11
CDR2-204ENST00000564542 P4HBP07237 508 aaKnown RBP15.75■□□□□ 0.11
CDR2-204ENST00000564542 SRGAP2CP0DJJ0 459 aa15.75■□□□□ 0.11
CDR2-204ENST00000564542 GCFC2P16383 781 aaKnown RBP15.75■□□□□ 0.11
CDR2-204ENST00000564542 NCLP19338 710 aaKnown RBP15.75■□□□□ 0.11
CDR2-204ENST00000564542 LAMTOR4Q0VGL1 99 aa15.75■□□□□ 0.11
CDR2-204ENST00000564542 CWF19L1Q69YN2 538 aaKnown RBP15.75■□□□□ 0.11
CDR2-204ENST00000564542 PPP4R3AQ6IN85 833 aa15.75■□□□□ 0.11
CDR2-204ENST00000564542 NEK8Q86SG6 692 aa15.75■□□□□ 0.11
CDR2-204ENST00000564542 C4orf19Q8IY42 314 aa15.75■□□□□ 0.11
CDR2-204ENST00000564542 CNNM3Q8NE01 707 aa15.75■□□□□ 0.11
CDR2-204ENST00000564542 TCP11Q8WWU5 503 aa15.75■□□□□ 0.11
CDR2-204ENST00000564542 TMEM143Q96AN5 459 aa15.75■□□□□ 0.11
CDR2-204ENST00000564542 LXNQ9BS40 222 aa15.75■□□□□ 0.11
CDR2-204ENST00000564542 SLKQ9H2G2 1235 aaPredicted RBP15.75■□□□□ 0.11
CDR2-204ENST00000564542 UBN1Q9NPG3 1134 aa15.75■□□□□ 0.11
CDR2-204ENST00000564542 DUSP12Q9UNI6 340 aa15.75■□□□□ 0.11
CDR2-204ENST00000564542 FAN1Q9Y2M0 1017 aa15.75■□□□□ 0.11
CDR2-204ENST00000564542 PRR23AA6NEV1 266 aa15.74■□□□□ 0.11
CDR2-204ENST00000564542 NRP1O14786 923 aa15.74■□□□□ 0.11
CDR2-204ENST00000564542 TBX3O15119 743 aa15.74■□□□□ 0.11
CDR2-204ENST00000564542 INPPL1O15357 1258 aa15.74■□□□□ 0.11
CDR2-204ENST00000564542 URODP06132 367 aa15.74■□□□□ 0.11
CDR2-204ENST00000564542 YWHABP31946 246 aaKnown RBP15.74■□□□□ 0.11
CDR2-204ENST00000564542 TDGQ13569 410 aa15.74■□□□□ 0.11
CDR2-204ENST00000564542 EMC2Q15006 297 aa15.74■□□□□ 0.11
CDR2-204ENST00000564542 PCBP1Q15365 356 aaKnown RBP eCLIP15.74■□□□□ 0.11
CDR2-204ENST00000564542 ASCL5Q7RTU5 278 aa15.74■□□□□ 0.11
CDR2-204ENST00000564542 FERMT3Q86UX7 667 aa15.74■□□□□ 0.11
CDR2-204ENST00000564542 RNF149Q8NC42 400 aa15.74■□□□□ 0.11
CDR2-204ENST00000564542 CMASQ8NFW8 434 aaPredicted RBP15.74■□□□□ 0.11
CDR2-204ENST00000564542 PHF20Q9BVI0 1012 aa15.74■□□□□ 0.11
CDR2-204ENST00000564542 HERC2P3Q9BVR0 1158 aa15.74■□□□□ 0.11
CDR2-204ENST00000564542 MAN1C1Q9NR34 630 aa15.74■□□□□ 0.11
CDR2-204ENST00000564542 BMP2KQ9NSY1 1161 aaPredicted RBP15.74■□□□□ 0.11
CDR2-204ENST00000564542 MARCH5Q9NX47 278 aa15.74■□□□□ 0.11
CDR2-204ENST00000564542 KCNJ14Q9UNX9 436 aa15.74■□□□□ 0.11
CDR2-204ENST00000564542 SSX2IPQ9Y2D8 614 aa15.74■□□□□ 0.11
CDR2-204ENST00000564542 ASAP2O43150 1006 aa15.73■□□□□ 0.11
CDR2-204ENST00000564542 CDKL5O76039 1030 aa15.73■□□□□ 0.11
CDR2-204ENST00000564542 ERLIN2O94905 339 aa15.73■□□□□ 0.11
CDR2-204ENST00000564542 ADH1AP07327 375 aa15.73■□□□□ 0.11
CDR2-204ENST00000564542 STK3Q13188 491 aa15.73■□□□□ 0.11
CDR2-204ENST00000564542 EPHA7Q15375 998 aa15.73■□□□□ 0.11
CDR2-204ENST00000564542 ELMSAN1Q6PJG2 1045 aa15.73■□□□□ 0.11
CDR2-204ENST00000564542 OTUD6AQ7L8S5 288 aa15.73■□□□□ 0.11
CDR2-204ENST00000564542 COLGALT2Q8IYK4 626 aa15.73■□□□□ 0.11
CDR2-204ENST00000564542 RNF168Q8IYW5 571 aaPredicted RBP15.73■□□□□ 0.11
CDR2-204ENST00000564542 SMG8Q8ND04 991 aaKnown RBP15.73■□□□□ 0.11
CDR2-204ENST00000564542 FLCNQ8NFG4 579 aa15.73■□□□□ 0.11
CDR2-204ENST00000564542 HAS1Q92839 578 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms