RNA–Protein interactions for RNA: ENST00000564354.1

AP000842.3-201, humanhuman

TSL 3 BASIC

Gene AP000842.3, Length 808 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000842.3-201ENST00000564354 DDX46Q7L014 1031 aaKnown RBP7.78□□□□□ -1.16
AP000842.3-201ENST00000564354 KRT26Q7Z3Y9 468 aa7.78□□□□□ -1.16
AP000842.3-201ENST00000564354 LIMS2Q7Z4I7 341 aa7.78□□□□□ -1.16
AP000842.3-201ENST00000564354 ZNF428Q96B54 188 aa7.78□□□□□ -1.16
AP000842.3-201ENST00000564354 DCPSQ96C86 337 aaKnown RBP7.78□□□□□ -1.16
AP000842.3-201ENST00000564354 TOE1Q96GM8 510 aaKnown RBP7.78□□□□□ -1.16
AP000842.3-201ENST00000564354 UTP14AQ9BVJ6 771 aaKnown RBP7.78□□□□□ -1.16
AP000842.3-201ENST00000564354 PGAP2Q9UHJ9 254 aa7.78□□□□□ -1.16
AP000842.3-201ENST00000564354 COL3A1P02461 1466 aaPredicted RBP7.78□□□□□ -1.16
AP000842.3-201ENST00000564354 AKAP11Q9UKA4 1901 aa7.78□□□□□ -1.16
AP000842.3-201ENST00000564354 SNED1Q8TER0 1413 aa7.78□□□□□ -1.16
AP000842.3-201ENST00000564354 ZNF536O15090 1300 aa7.78□□□□□ -1.16
AP000842.3-201ENST00000564354 UBN2Q6ZU65 1347 aa7.78□□□□□ -1.16
AP000842.3-201ENST00000564354 CDHR2Q9BYE9 1310 aa7.78□□□□□ -1.16
AP000842.3-201ENST00000564354 FZD7O75084 574 aa7.77□□□□□ -1.17
AP000842.3-201ENST00000564354 NTSR2O95665 410 aa7.77□□□□□ -1.17
AP000842.3-201ENST00000564354 TCF3P15923 654 aa7.77□□□□□ -1.17
AP000842.3-201ENST00000564354 CR1LQ2VPA4 569 aa7.77□□□□□ -1.17
AP000842.3-201ENST00000564354 DENND5AQ6IQ26 1287 aa7.77□□□□□ -1.17
AP000842.3-201ENST00000564354 ZNF34Q8IZ26 560 aa7.77□□□□□ -1.17
AP000842.3-201ENST00000564354 Q8N1Y9 231 aa7.77□□□□□ -1.17
AP000842.3-201ENST00000564354 TXNDC5Q8NBS9 432 aaKnown RBP7.77□□□□□ -1.17
AP000842.3-201ENST00000564354 ARRDC4Q8NCT1 418 aa7.77□□□□□ -1.17
AP000842.3-201ENST00000564354 ZSWIM3Q96MP5 696 aa7.77□□□□□ -1.17
AP000842.3-201ENST00000564354 GBA2Q9HCG7 927 aaPredicted RBP7.77□□□□□ -1.17
AP000842.3-201ENST00000564354 PCDHB4Q9Y5E5 795 aa7.77□□□□□ -1.17
AP000842.3-201ENST00000564354 RIC1Q4ADV7 1423 aa7.77□□□□□ -1.17
AP000842.3-201ENST00000564354 POLR2AP24928 1970 aaKnown RBP7.77□□□□□ -1.17
AP000842.3-201ENST00000564354 ABCC4O15439 1325 aa7.77□□□□□ -1.17
AP000842.3-201ENST00000564354 LAMB4A4D0S4 1761 aa7.76□□□□□ -1.17
AP000842.3-201ENST00000564354 IBTKQ9P2D0 1353 aaPredicted RBP7.76□□□□□ -1.17
AP000842.3-201ENST00000564354 SHTN1A0MZ66 631 aa7.76□□□□□ -1.17
AP000842.3-201ENST00000564354 CYP1A1P04798 512 aaPredicted RBP7.76□□□□□ -1.17
AP000842.3-201ENST00000564354 EIF2S2P20042 333 aaKnown RBP7.76□□□□□ -1.17
AP000842.3-201ENST00000564354 DNAJA1P31689 397 aaKnown RBP7.76□□□□□ -1.17
AP000842.3-201ENST00000564354 GRIA2P42262 883 aa7.76□□□□□ -1.17
AP000842.3-201ENST00000564354 PRR31Q5SQ13 230 aa7.76□□□□□ -1.17
AP000842.3-201ENST00000564354 DLK2Q6UY11 383 aa7.76□□□□□ -1.17
AP000842.3-201ENST00000564354 THUMPD2Q9BTF0 503 aaKnown RBP7.76□□□□□ -1.17
AP000842.3-201ENST00000564354 ZNF747Q9BV97 191 aa7.76□□□□□ -1.17
AP000842.3-201ENST00000564354 RTFDC1Q9BY42 306 aaPredicted RBP7.76□□□□□ -1.17
AP000842.3-201ENST00000564354 RNF186Q9NXI6 227 aa7.76□□□□□ -1.17
AP000842.3-201ENST00000564354 SAGE1Q9NXZ1 904 aa7.76□□□□□ -1.17
AP000842.3-201ENST00000564354 HDAC9Q9UKV0 1011 aa7.76□□□□□ -1.17
AP000842.3-201ENST00000564354 ADM5C9JUS6 153 aa7.75□□□□□ -1.17
AP000842.3-201ENST00000564354 PSMD14O00487 310 aa7.75□□□□□ -1.17
AP000842.3-201ENST00000564354 EIF4A1P60842 406 aaKnown RBP7.75□□□□□ -1.17
AP000842.3-201ENST00000564354 PPP2R2AP63151 447 aa7.75□□□□□ -1.17
AP000842.3-201ENST00000564354 AIMP1Q12904 312 aaKnown RBP7.75□□□□□ -1.17
AP000842.3-201ENST00000564354 SLC10A5Q5PT55 438 aa7.75□□□□□ -1.17
AP000842.3-201ENST00000564354 CTU1Q7Z7A3 348 aaKnown RBP7.75□□□□□ -1.17
AP000842.3-201ENST00000564354 KCTD13Q8WZ19 329 aa7.75□□□□□ -1.17
AP000842.3-201ENST00000564354 LCORQ96JN0 433 aaPredicted RBP7.75□□□□□ -1.17
AP000842.3-201ENST00000564354 CLIC6Q96NY7 704 aa7.75□□□□□ -1.17
AP000842.3-201ENST00000564354 PCED1AQ9H1Q7 454 aa7.75□□□□□ -1.17
AP000842.3-201ENST00000564354 DBNDD1Q9H9R9 158 aa7.75□□□□□ -1.17
AP000842.3-201ENST00000564354 CD248Q9HCU0 757 aa7.75□□□□□ -1.17
AP000842.3-201ENST00000564354 TRMT112Q9UI30 125 aaKnown RBP7.75□□□□□ -1.17
AP000842.3-201ENST00000564354 PDE4DIPQ5VU43 2346 aa7.74□□□□□ -1.17
AP000842.3-201ENST00000564354 YDJCA8MPS7 323 aa7.74□□□□□ -1.17
AP000842.3-201ENST00000564354 RBM25P49756 843 aaKnown RBP7.74□□□□□ -1.17
AP000842.3-201ENST00000564354 GRAPQ13588 217 aa7.74□□□□□ -1.17
AP000842.3-201ENST00000564354 ICAM4Q14773 271 aa7.74□□□□□ -1.17
AP000842.3-201ENST00000564354 SURF1Q15526 300 aa7.74□□□□□ -1.17
AP000842.3-201ENST00000564354 TESK1Q15569 626 aa7.74□□□□□ -1.17
AP000842.3-201ENST00000564354 SLC10A6Q3KNW5 377 aa7.74□□□□□ -1.17
AP000842.3-201ENST00000564354 HSP90AB3PQ58FF7 597 aa7.74□□□□□ -1.17
AP000842.3-201ENST00000564354 CRB2Q5IJ48 1285 aa7.74□□□□□ -1.17
AP000842.3-201ENST00000564354 USP53Q70EK8 1073 aa7.74□□□□□ -1.17
AP000842.3-201ENST00000564354 USP51Q70EK9 711 aa7.74□□□□□ -1.17
AP000842.3-201ENST00000564354 GRAPLQ8TC17 118 aaPredicted RBP7.74□□□□□ -1.17
AP000842.3-201ENST00000564354 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.74□□□□□ -1.17
AP000842.3-201ENST00000564354 HNRNPLLQ8WVV9 542 aaKnown RBP7.74□□□□□ -1.17
AP000842.3-201ENST00000564354 DPF2Q92785 391 aa7.74□□□□□ -1.17
AP000842.3-201ENST00000564354 CDK5RAP1Q96SZ6 601 aaKnown RBP7.74□□□□□ -1.17
AP000842.3-201ENST00000564354 IER2Q9BTL4 223 aa7.74□□□□□ -1.17
AP000842.3-201ENST00000564354 KLC2Q9H0B6 622 aa7.74□□□□□ -1.17
AP000842.3-201ENST00000564354 EPN3Q9H201 632 aa7.74□□□□□ -1.17
AP000842.3-201ENST00000564354 VPS11Q9H270 941 aa7.74□□□□□ -1.17
AP000842.3-201ENST00000564354 EPB41L1Q9H4G0 881 aa7.74□□□□□ -1.17
AP000842.3-201ENST00000564354 L2HGDHQ9H9P8 463 aa7.74□□□□□ -1.17
AP000842.3-201ENST00000564354 DTLQ9NZJ0 730 aa7.74□□□□□ -1.17
AP000842.3-201ENST00000564354 PPP4R1LQ9P1A2 415 aa7.74□□□□□ -1.17
AP000842.3-201ENST00000564354 CROTQ9UKG9 612 aa7.74□□□□□ -1.17
AP000842.3-201ENST00000564354 A0A1W2PQU0 124 aa7.73□□□□□ -1.17
AP000842.3-201ENST00000564354 TCRBV5S2A0A599 114 aa7.73□□□□□ -1.17
AP000842.3-201ENST00000564354 LAMTOR5O43504 91 aa7.73□□□□□ -1.17
AP000842.3-201ENST00000564354 TADA3O75528 432 aa7.73□□□□□ -1.17
AP000842.3-201ENST00000564354 ANXA1P04083 346 aa7.73□□□□□ -1.17
AP000842.3-201ENST00000564354 FGRP09769 529 aa7.73□□□□□ -1.17
AP000842.3-201ENST00000564354 RPS12P25398 132 aaKnown RBP7.73□□□□□ -1.17
AP000842.3-201ENST00000564354 PPP2R1AP30153 589 aa7.73□□□□□ -1.17
AP000842.3-201ENST00000564354 ADAM9Q13443 819 aa7.73□□□□□ -1.17
AP000842.3-201ENST00000564354 SLC35F1Q5T1Q4 408 aa7.73□□□□□ -1.17
AP000842.3-201ENST00000564354 TEPPQ6URK8 271 aa7.73□□□□□ -1.17
AP000842.3-201ENST00000564354 MCF2L2Q86YR7 1114 aa7.73□□□□□ -1.17
AP000842.3-201ENST00000564354 EYA3Q99504 573 aa7.73□□□□□ -1.17
AP000842.3-201ENST00000564354 JAM3Q9BX67 310 aa7.73□□□□□ -1.17
AP000842.3-201ENST00000564354 GGA3Q9NZ52 723 aa7.73□□□□□ -1.17
AP000842.3-201ENST00000564354 MYOTQ9UBF9 498 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms