RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 OFD1O75665 1012 aa17.95■□□□□ 0.46
RNF40-205ENST00000563909 URODP06132 367 aa17.95■□□□□ 0.46
RNF40-205ENST00000563909 ZBTB41Q5SVQ8 909 aa17.95■□□□□ 0.46
RNF40-205ENST00000563909 PARM1Q6UWI2 310 aa17.95■□□□□ 0.46
RNF40-205ENST00000563909 ZNF710Q8N1W2 664 aa17.95■□□□□ 0.46
RNF40-205ENST00000563909 IGDCC4Q8TDY8 1250 aa17.95■□□□□ 0.46
RNF40-205ENST00000563909 MAP3K14Q99558 947 aa17.95■□□□□ 0.46
RNF40-205ENST00000563909 NT5C3AQ9H0P0 336 aa17.95■□□□□ 0.46
RNF40-205ENST00000563909 LTB4R2Q9NPC1 389 aa17.95■□□□□ 0.46
RNF40-205ENST00000563909 CHST12Q9NRB3 414 aa17.95■□□□□ 0.46
RNF40-205ENST00000563909 TAF6LQ9Y6J9 622 aa17.95■□□□□ 0.46
RNF40-205ENST00000563909 MEIS1O00470 390 aa17.94■□□□□ 0.46
RNF40-205ENST00000563909 ALDH2P05091 517 aa17.94■□□□□ 0.46
RNF40-205ENST00000563909 SMARCA1P28370 1054 aa17.94■□□□□ 0.46
RNF40-205ENST00000563909 PMLP29590 882 aa17.94■□□□□ 0.46
RNF40-205ENST00000563909 GPC3P51654 580 aa17.94■□□□□ 0.46
RNF40-205ENST00000563909 N4BP2L1Q5TBK1 243 aaPredicted RBP17.94■□□□□ 0.46
RNF40-205ENST00000563909 LAIR1Q6GTX8 287 aa17.94■□□□□ 0.46
RNF40-205ENST00000563909 NLRP7Q8WX94 980 aa17.94■□□□□ 0.46
RNF40-205ENST00000563909 DDX1Q92499 740 aaKnown RBP17.94■□□□□ 0.46
RNF40-205ENST00000563909 COL26A1Q96A83 441 aa17.94■□□□□ 0.46
RNF40-205ENST00000563909 LZTS2Q9BRK4 669 aa17.94■□□□□ 0.46
RNF40-205ENST00000563909 MYL10Q9BUA6 226 aa17.94■□□□□ 0.46
RNF40-205ENST00000563909 FAM126AQ9BYI3 521 aaPredicted RBP17.94■□□□□ 0.46
RNF40-205ENST00000563909 CEP131Q9UPN4 1083 aa17.94■□□□□ 0.46
RNF40-205ENST00000563909 FAN1Q9Y2M0 1017 aa17.94■□□□□ 0.46
RNF40-205ENST00000563909 ZFP37Q9Y6Q3 630 aaPredicted RBP17.94■□□□□ 0.46
RNF40-205ENST00000563909 GDF9O60383 454 aa17.93■□□□□ 0.46
RNF40-205ENST00000563909 LRP3O75074 770 aa17.93■□□□□ 0.46
RNF40-205ENST00000563909 DDHD2O94830 711 aa17.93■□□□□ 0.46
RNF40-205ENST00000563909 SEC24BO95487 1268 aa17.93■□□□□ 0.46
RNF40-205ENST00000563909 PROS1P07225 676 aa17.93■□□□□ 0.46
RNF40-205ENST00000563909 SKIP12755 728 aa17.93■□□□□ 0.46
RNF40-205ENST00000563909 ANTXR2P58335 489 aa17.93■□□□□ 0.46
RNF40-205ENST00000563909 TWF2Q6IBS0 349 aaKnown RBP17.93■□□□□ 0.46
RNF40-205ENST00000563909 TAS1R1Q7RTX1 841 aa17.93■□□□□ 0.46
RNF40-205ENST00000563909 PALB2Q86YC2 1186 aa17.93■□□□□ 0.46
RNF40-205ENST00000563909 RASEFQ8IZ41 740 aa17.93■□□□□ 0.46
RNF40-205ENST00000563909 ZNF654Q8IZM8 581 aa17.93■□□□□ 0.46
RNF40-205ENST00000563909 CMTR1Q8N1G2 835 aaKnown RBP17.93■□□□□ 0.46
RNF40-205ENST00000563909 SRBD1Q8N5C6 995 aaKnown RBP17.93■□□□□ 0.46
RNF40-205ENST00000563909 LINC01465Q8N7H1 131 aa17.93■□□□□ 0.46
RNF40-205ENST00000563909 CLDN23Q96B33 292 aa17.93■□□□□ 0.46
RNF40-205ENST00000563909 TRAIPQ9BWF2 469 aa17.93■□□□□ 0.46
RNF40-205ENST00000563909 PRMT8Q9NR22 394 aaPredicted RBP17.93■□□□□ 0.46
RNF40-205ENST00000563909 SEMA4GQ9NTN9 838 aa17.93■□□□□ 0.46
RNF40-205ENST00000563909 SSX2IPQ9Y2D8 614 aa17.93■□□□□ 0.46
RNF40-205ENST00000563909 MAFBQ9Y5Q3 323 aaPredicted RBP17.93■□□□□ 0.46
RNF40-205ENST00000563909 hCG_1642624A0A1W2PR95 340 aa17.92■□□□□ 0.46
RNF40-205ENST00000563909 GAS2O43903 313 aaKnown RBP17.92■□□□□ 0.46
RNF40-205ENST00000563909 DDAH1O94760 285 aa17.92■□□□□ 0.46
RNF40-205ENST00000563909 PLEKHA8P1O95397 391 aa17.92■□□□□ 0.46
RNF40-205ENST00000563909 SOD2P04179 222 aa17.92■□□□□ 0.46
RNF40-205ENST00000563909 RETP07949 1114 aa17.92■□□□□ 0.46
RNF40-205ENST00000563909 FSHRP23945 695 aa17.92■□□□□ 0.46
RNF40-205ENST00000563909 SHC2P98077 582 aa17.92■□□□□ 0.46
RNF40-205ENST00000563909 RSPO2Q6UXX9 243 aaPredicted RBP17.92■□□□□ 0.46
RNF40-205ENST00000563909 PRR23CQ6ZRP0 262 aa17.92■□□□□ 0.46
RNF40-205ENST00000563909 CELF5Q8N6W0 485 aaKnown RBP17.92■□□□□ 0.46
RNF40-205ENST00000563909 URGCPQ8TCY9 931 aa17.92■□□□□ 0.46
RNF40-205ENST00000563909 HDAC7Q8WUI4 952 aa17.92■□□□□ 0.46
RNF40-205ENST00000563909 PGBD1Q96JS3 809 aa17.92■□□□□ 0.46
RNF40-205ENST00000563909 NELL2Q99435 816 aa17.92■□□□□ 0.46
RNF40-205ENST00000563909 PRKD2Q9BZL6 878 aa17.92■□□□□ 0.46
RNF40-205ENST00000563909 PLEKHA4Q9H4M7 779 aa17.92■□□□□ 0.46
RNF40-205ENST00000563909 LY9Q9HBG7 655 aa17.92■□□□□ 0.46
RNF40-205ENST00000563909 SNX14Q9Y5W7 946 aa17.92■□□□□ 0.46
RNF40-205ENST00000563909 CNOT1A5YKK6 2376 aaKnown RBP17.91■□□□□ 0.46
RNF40-205ENST00000563909 NRP1O14786 923 aa17.91■□□□□ 0.46
RNF40-205ENST00000563909 NCAM2O15394 837 aa17.91■□□□□ 0.46
RNF40-205ENST00000563909 DHX15O43143 795 aaKnown RBP17.91■□□□□ 0.46
RNF40-205ENST00000563909 PAPLNO95428 1278 aa17.91■□□□□ 0.46
RNF40-205ENST00000563909 HMGB1P09429 215 aaKnown RBP17.91■□□□□ 0.46
RNF40-205ENST00000563909 TARSP26639 723 aaKnown RBP17.91■□□□□ 0.46
RNF40-205ENST00000563909 MCM5P33992 734 aa17.91■□□□□ 0.46
RNF40-205ENST00000563909 ZNF76P36508 570 aa17.91■□□□□ 0.46
RNF40-205ENST00000563909 RPS9P46781 194 aaKnown RBP17.91■□□□□ 0.46
RNF40-205ENST00000563909 GNAQP50148 359 aa17.91■□□□□ 0.46
RNF40-205ENST00000563909 PFKPQ01813 784 aa17.91■□□□□ 0.46
RNF40-205ENST00000563909 MTAPQ13126 283 aa17.91■□□□□ 0.46
RNF40-205ENST00000563909 CSRP2Q16527 193 aa17.91■□□□□ 0.46
RNF40-205ENST00000563909 PRR23BQ6ZRT6 265 aa17.91■□□□□ 0.46
RNF40-205ENST00000563909 MB21D2Q8IYB1 491 aaPredicted RBP17.91■□□□□ 0.46
RNF40-205ENST00000563909 FAM193BQ96PV7 902 aaPredicted RBP17.91■□□□□ 0.46
RNF40-205ENST00000563909 MTA3Q9BTC8 594 aa17.91■□□□□ 0.46
RNF40-205ENST00000563909 FAM217BQ9NTX9 383 aaPredicted RBP17.91■□□□□ 0.46
RNF40-205ENST00000563909 FAM105AQ9NUU6 356 aa17.91■□□□□ 0.46
RNF40-205ENST00000563909 ZDHHC7Q9NXF8 308 aa17.91■□□□□ 0.46
RNF40-205ENST00000563909 CDH7Q9ULB5 785 aa17.91■□□□□ 0.46
RNF40-205ENST00000563909 NBEAQ8NFP9 2946 aa17.91■□□□□ 0.46
RNF40-205ENST00000563909 PSMA5P28066 241 aa17.9■□□□□ 0.46
RNF40-205ENST00000563909 AFF1P51825 1210 aaKnown RBP17.9■□□□□ 0.46
RNF40-205ENST00000563909 NRLP54845 237 aa17.9■□□□□ 0.46
RNF40-205ENST00000563909 IL31Q6EBC2 164 aa17.9■□□□□ 0.46
RNF40-205ENST00000563909 HEATR3Q7Z4Q2 680 aa17.9■□□□□ 0.46
RNF40-205ENST00000563909 TMEM175Q9BSA9 504 aa17.9■□□□□ 0.46
RNF40-205ENST00000563909 HERC2P3Q9BVR0 1158 aa17.9■□□□□ 0.46
RNF40-205ENST00000563909 GCOM2Q9BZD3 368 aaPredicted RBP17.9■□□□□ 0.46
RNF40-205ENST00000563909 RXFP1Q9HBX9 757 aa17.9■□□□□ 0.46
RNF40-205ENST00000563909 GABBR1Q9UBS5 961 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms