RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 SGO2Q562F6 1265 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 TAOK1Q7L7X3 1001 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 CCT6BQ92526 530 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 CHMP6Q96FZ7 201 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 PARP2Q9UGN5 583 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 DENND3A2RUS2 1198 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 CCT8L1PA6NM43 557 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 RBAK-RBAKDNI3L0D1 243 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 ZBTB39O15060 712 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 CTNND1O60716 968 aaKnown RBP11.22□□□□□ -0.61
RNF40-204ENST00000563683 KRT15P19012 456 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 ELF3P78545 371 aaPredicted RBP11.22□□□□□ -0.61
RNF40-204ENST00000563683 CLUL1Q15846 466 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 COBLL1Q53SF7 1204 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 MEI1Q5TIA1 1274 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 DCAF15Q66K64 600 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 CIAPIN1Q6FI81 312 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.22□□□□□ -0.61
RNF40-204ENST00000563683 CNKSR2Q8WXI2 1034 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 SLC7A3Q8WY07 619 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 HAS1Q92839 578 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 ZDHHC15Q96MV8 337 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 FEM1BQ9UK73 627 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 ATF5Q9Y2D1 282 aaPredicted RBP11.22□□□□□ -0.61
RNF40-204ENST00000563683 AKAP11Q9UKA4 1901 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 FRMD3A2A2Y4 597 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 POLRMTO00411 1230 aaKnown RBP11.22□□□□□ -0.61
RNF40-204ENST00000563683 THAP12O43422 761 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 GCKP35557 465 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 EIF3BP55884 814 aaKnown RBP11.22□□□□□ -0.61
RNF40-204ENST00000563683 NCAPG2Q86XI2 1143 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 OR2W6PQ8NHA6 318 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 SYN2Q92777 582 aaPredicted RBP11.22□□□□□ -0.61
RNF40-204ENST00000563683 AS3MTQ9HBK9 375 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 SLC24A3Q9HC58 644 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 SPATS2LQ9NUQ6 558 aaKnown RBP11.22□□□□□ -0.61
RNF40-204ENST00000563683 SEL1LQ9UBV2 794 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 NAGPAQ9UK23 515 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 ZNF148Q9UQR1 794 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 MYH6P13533 1939 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 PASKQ96RG2 1323 aa11.22□□□□□ -0.61
RNF40-204ENST00000563683 NUP188Q5SRE5 1749 aa11.21□□□□□ -0.61
RNF40-204ENST00000563683 FAM86B1E9PN63 330 aa11.21□□□□□ -0.61
RNF40-204ENST00000563683 TTI1O43156 1089 aa11.21□□□□□ -0.61
RNF40-204ENST00000563683 RTN2O75298 545 aa11.21□□□□□ -0.61
RNF40-204ENST00000563683 FAM86B2P0C5J1 330 aa11.21□□□□□ -0.61
RNF40-204ENST00000563683 OSTNP61366 133 aa11.21□□□□□ -0.61
RNF40-204ENST00000563683 RIPK1Q13546 671 aa11.21□□□□□ -0.61
RNF40-204ENST00000563683 QPCTQ16769 361 aa11.21□□□□□ -0.61
RNF40-204ENST00000563683 ZNF394Q53GI3 561 aa11.21□□□□□ -0.61
RNF40-204ENST00000563683 LMBRD2Q68DH5 695 aaPredicted RBP11.21□□□□□ -0.61
RNF40-204ENST00000563683 RHOT2Q8IXI1 618 aa11.21□□□□□ -0.61
RNF40-204ENST00000563683 RTKN2Q8IZC4 609 aa11.21□□□□□ -0.61
RNF40-204ENST00000563683 SLC35G2Q8TBE7 412 aa11.21□□□□□ -0.61
RNF40-204ENST00000563683 CENPTQ96BT3 561 aa11.21□□□□□ -0.61
RNF40-204ENST00000563683 TBC1D31Q96DN5 1066 aa11.21□□□□□ -0.61
RNF40-204ENST00000563683 INPP4AQ96PE3 977 aaPredicted RBP11.21□□□□□ -0.61
RNF40-204ENST00000563683 PSMD1Q99460 953 aa11.21□□□□□ -0.61
RNF40-204ENST00000563683 FAM213AQ9BRX8 229 aa11.21□□□□□ -0.61
RNF40-204ENST00000563683 IQCGQ9H095 443 aaKnown RBP11.21□□□□□ -0.61
RNF40-204ENST00000563683 SALL4Q9UJQ4 1053 aa11.21□□□□□ -0.61
RNF40-204ENST00000563683 CHD4Q14839 1912 aa11.21□□□□□ -0.61
RNF40-204ENST00000563683 PON1P27169 355 aa11.21□□□□□ -0.61
RNF40-204ENST00000563683 SSTR3P32745 418 aaPredicted RBP11.21□□□□□ -0.61
RNF40-204ENST00000563683 COPB2P35606 906 aa11.21□□□□□ -0.61
RNF40-204ENST00000563683 GPC5P78333 572 aa11.21□□□□□ -0.61
RNF40-204ENST00000563683 PASD1Q8IV76 773 aa11.21□□□□□ -0.61
RNF40-204ENST00000563683 TRIM59Q8IWR1 403 aa11.21□□□□□ -0.61
RNF40-204ENST00000563683 CALR3Q96L12 384 aaKnown RBP11.21□□□□□ -0.61
RNF40-204ENST00000563683 HEMGNQ9BXL5 484 aa11.21□□□□□ -0.61
RNF40-204ENST00000563683 VPS37BQ9H9H4 285 aa11.21□□□□□ -0.61
RNF40-204ENST00000563683 TUFT1Q9NNX1 390 aa11.21□□□□□ -0.61
RNF40-204ENST00000563683 TBK1Q9UHD2 729 aa11.21□□□□□ -0.61
RNF40-204ENST00000563683 CD58P19256 250 aa11.21□□□□□ -0.62
RNF40-204ENST00000563683 NPEPPSP55786 919 aa11.21□□□□□ -0.62
RNF40-204ENST00000563683 MAGOHP61326 146 aaKnown RBP11.21□□□□□ -0.62
RNF40-204ENST00000563683 KCNA1Q09470 495 aa11.21□□□□□ -0.62
RNF40-204ENST00000563683 KCTD19Q17RG1 926 aaPredicted RBP11.21□□□□□ -0.62
RNF40-204ENST00000563683 ASTE1Q2TB18 679 aaPredicted RBP11.21□□□□□ -0.62
RNF40-204ENST00000563683 BRDTQ58F21 947 aaPredicted RBP11.21□□□□□ -0.62
RNF40-204ENST00000563683 CYP4F22Q6NT55 531 aa11.21□□□□□ -0.62
RNF40-204ENST00000563683 CYFIP1Q7L576 1253 aa11.21□□□□□ -0.62
RNF40-204ENST00000563683 AMIGO3Q86WK7 504 aa11.21□□□□□ -0.62
RNF40-204ENST00000563683 MAK16Q9BXY0 300 aaKnown RBP11.21□□□□□ -0.62
RNF40-204ENST00000563683 CELF4Q9BZC1 486 aaKnown RBP11.21□□□□□ -0.62
RNF40-204ENST00000563683 INTS9Q9NV88 658 aaKnown RBP11.21□□□□□ -0.62
RNF40-204ENST00000563683 GABBR1Q9UBS5 961 aa11.21□□□□□ -0.62
RNF40-204ENST00000563683 ANAPC7Q9UJX3 599 aa11.21□□□□□ -0.62
RNF40-204ENST00000563683 FBXL5Q9UKA1 691 aa11.21□□□□□ -0.62
RNF40-204ENST00000563683 PCDHGC5Q9Y5F6 944 aa11.21□□□□□ -0.62
RNF40-204ENST00000563683 H0YGN5 161 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 CYP26A1O43174 497 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 ENTPD3O75355 529 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 ACSL3O95573 720 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 ARP10275 920 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 EN1Q05925 392 aaPredicted RBP11.2□□□□□ -0.62
RNF40-204ENST00000563683 ITIH4Q14624 930 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 RASA3Q14644 834 aa11.2□□□□□ -0.62
RNF40-204ENST00000563683 NAIF1Q69YI7 327 aaPredicted RBP11.2□□□□□ -0.62
RNF40-204ENST00000563683 SWSAP1Q6NVH7 229 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms